Gene PHATRDRAFT_49418 details

Gene Information

• Locus tag: PHATRDRAFT_49418
• ID: 7195909
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011690
• Strand: +
• Start bp: 204411
• End bp: 206515
• Gene Length: 2105 bp
• Protein Length: 597 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002184082
• Protein GI: 219127729

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.162905
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AAGCTACGGT AGACGTACTT GTCCCATAAA AATTAGCTGA TGCTTTGATA CAACAATACT 
CTTTTGGCTG CCTGGTTTTA TCATTTCTTG GACATTTCGC CTATAGGCTG TTGGTTCTCG 
GAACATTGTA TAGCTCCGTC CAGTGCGCTT TACTTCTCGG TACCGGCCAA TACGTTCTGG 
GAGAACGCGT GTACAGTACG ACTACCTTCG AACCCTTGAT CGTCTGGCAC ACACCATGCA 
GGGTCTTCGT GAGGGAAATG TGCTTCAGCC ATCGCATTTC GTCAATAAAA TGAACTTGGG 
GAATTTGCGA AAAAGCCTGC GATGGGCAGG CCCTACCCCG ACCGAGCGTA CCGAAGCTCT 
GCAGGAACGC TTGGAGGAGC TGTTGGTATT CGAACTACAC AAGGACGGCG GTTCGCAATA 
TCTTACACTC AGTGTTCGAG GCCTCTATCG GCACGTTCTC AGCGCCATTA CGAATCGCAA 
AGACCAGATC AACGTCGACC TGGAGGAGAT ACCCAAAATG CCGAATGCCA CGAGTAATGA 
TCATCGACAG ACTCTGCATG ATTTAGTAAC GTCACCGTAT CCCCTGGGAC TAGCAAATAT 
CACTGGTGAA GAAGCGTCAG AAACTCAGGT AGCCCAGAGA AGAGTGACTT TTCAAGCTCC 
GTCGTTCCCA AAGCCTTCGA AACCAAAGCG CAACCGCAGC ATTTCAATCG ATACGACCGG 
TAAGGACCCA GCACGTCAGA GGAGCTCAGA AATCACTTAT CGAGAGCGTC TTGGCGGTTA 
TCTCCATCCT CGGGACATGA GGCGCTTGGT GACGCCCTTT TCGGCATCCA ACGAGCCTGC 
GCTTCTCGTC CGACGACACG TCATGTTGCT TAACTTTGAC CCACTTAGGG CGATCATTCT 
GCGAGATCGA CTGTTGGTGC TGGTACCGGA CGGAGCAGAT TCTTTGTTGG TGAAAGTGGA 
GCGACGCGTG CGCGGCGGCG CAGCAGAGGT CGAAGACTCA ATTTTCGGAG GAGGATCGAG 
CGTGAACTCT GCAAGTGACG AGAAAGATAT TGGTGATAAT CTGCATTCAA ACAACTCCCG 
CTCCTCGGAC GAAAAGCAGA GAAAAGCAAA AAAATCGTTG CTCAGCAAGA TCATAGGGCG 
CCATTCGTCA AAATCTGATG ACTGCGACCC CATTTCGAGC GAATCTGGAA AAGCGTTTGA 
AGCGTCACAG TCCACGCCGT CAGAAACGAC AGAGTTAGAA GACGCTGCTG ATAGTGAAGA 
AGACGACTCA CAGGATGCGG ACGAATGGGA CGAGATGGAA GGCCGGGAAT GGATTGATCT 
GCCTTTCGAA CTGCAGTGCG CTGATGCATG TTTGAATATC GTTTGTGAGC TGCTTACTGA 
TGATACAAAG GAATTGCAAG AAGCCACTGT CGGCTACATT CATCGTATCA TCACCGACCA 
TGGAGTTAGT GATGACCCCC TGACAATAAT CCGTGCCATT AAGGATGCAA CCCGAGAGAT 
GAACGCCCGT GTGAAGGGTT TTGTCCAGTC AATGAATAGA ATACTGGACG AAGATGAGGA 
CATGGTACGT CTAGACTTCG GCTCGACTGA ATGTCGGATT TGACGATACT GACAAACTTA 
TATGTTTGTA TACATCACAG GCCTTGATGA ATTTATCTCG ATTGCTTACC CATCCGGAGC 
GGTTTATTCA ACCAGTTCCA CAAAGCGTCC TCGAGGAGGA GTCTGATGAG TCTGAACTAC 
TTTTGGAGTC CCACCTACAA ACTTCCTTGA CATTAATGAA TTCCTTAGAT TTGATACAAG 
GCCAAATTGA TACGGCTGCC GAGCTTGTTG ACCAGAAATT AGACTCTGCG AGGAACAAGA 
TTTTGTTCGC CAACATGTTG ATAAGCGTGT TGTCGCTTTG CGTAGCGTCC GTCTCATTGG 
TTGGGTCTCT ATTTGGAATG AATCTTTTGA ATTATCTGGA GGATGACCCC AACGCATTCC 
GTCAAGTAAC GTACGGGGGA CTAGCCGGAG GTGTTGCTTT AGGCATGCTC ATCATGCTCG 
TGTTGATATA CTCAGGGACA ATCCCTAGAT TTCGGCTAAC TTCGAGTGAT CCCGCGAATT 
TGTAA 

 

Protein sequence

MQGLREGNVL QPSHFVNKMN LGNLRKSLRW AGPTPTERTE ALQERLEELL VFELHKDGGS 
QYLTLSVRGL YRHVLSAITN RKDQINVDLE EIPKMPNATS NDHRQTLHDL VTSPYPLGLA 
NITGEEASET QVAQRRVTFQ APSFPKPSKP KRNRSISIDT TGKDPARQRS SEITYRERLG 
GYLHPRDMRR LVTPFSASNE PALLVRRHVM LLNFDPLRAI ILRDRLLVLV PDGADSLLVK 
VERRVRGGAA EVEDSIFGGG SSVNSASDEK DIGDNLHSNN SRSSDEKQRK AKKSLLSKII 
GRHSSKSDDC DPISSESGKA FEASQSTPSE TTELEDAADS EEDDSQDADE WDEMEGREWI 
DLPFELQCAD ACLNIVCELL TDDTKELQEA TVGYIHRIIT DHGVSDDPLT IIRAIKDATR 
EMNARVKGFV QSMNRILDED EDMALMNLSR LLTHPERFIQ PVPQSVLEEE SDESELLLES 
HLQTSLTLMN SLDLIQGQID TAAELVDQKL DSARNKILFA NMLISVLSLC VASVSLVGSL 
FGMNLLNYLE DDPNAFRQVT YGGLAGGVAL GMLIMLVLIY SGTIPRFRLT SSDPANL