| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49408 |
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| Symbol | |
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| ID | 7195902 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011690 |
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| Strand | + |
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| Start bp | 176601 |
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| End bp | 180390 |
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| Gene Length | 3790 bp |
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| Protein Length | 1026 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184075 |
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| Protein GI | 219127714 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.612989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AACAACCTGT CTTGACCGTG AAAACCAAAA TCGTTCAGTA GCCTATGGTG ATTGGTGGGG
CTTGGAAGAA CGATGAATAG TTCAGGTCAC AGACGGTTGT TCCGTTGGAA TCGTGACAAA
CACGGTGATA GTTTTGACGC TTCAACCGAA GGGGGAGGAA GCAGCCATGC TCTTCCGGTA
TCGAAATCTG GCTCACCGGT TCCCAGTGAT AGTATTCCCA AAAGTTTTGC ACAAAGCCGA
ATCAATTGGG AGTCCGGAAA GAAGTACGAC GAGTCATCGC AGGATTTTTC CGGACATCGC
AGTCGTGATG ATTCTGTAGT GGAAACAAAG CTTTGGAGGA ACAAGCTGAC AAAAAATCTC
CGTGGTAAAT TCAGTCCACG TTCAGGTCTC CAGATAAGAA AGCGTAGAGA TAAGAAGGAT
TTAAAAGAAG AGGCCGAATC TCGCTTCCTC CGGACCACAA GTTTATCCGA CGTTGATGAC
ACCTTGACTC GAAACGACTC TCGTGGATGG CACAAGCGAA ATGGCCATCC CAGAAATTTA
GCTCATGCAA AGAAAAGAGG CGATGACTCG TTGGAATTCG CACGAAAACA ATCCCCGCCG
TCTAGCACGG TATTCTTTGA ACAAGGAATG TACTCTGCTG CATCGGTAGA GGAGCTTGGA
TATGAAACTA TGACTGGCTT CACCGACGCT CCGAAAGAGT CAGACCAACA GTTGGAGATG
AAACGGGCGA ACTATGGAAC AGGGCATTCG AAACGCAAGT TTCGCTTACG ACCCCACCAT
TGTTTTGAGA AGGCTACGTA CATGACAGAG GAAGACATTT ACTCGGATAG TATAGAGCCG
TCCCAGTCTT TTGAGTTCTT GAAGTCTTAT CTGGCACCGA CTGCTTTCAC AGAGCCGAAA
GGCGAACGTG ATGGAAAAAT TGAAGAAAGT TATGGTTCGC CGGAAACCGA TGGCCGTGTG
GGAGCGCTGC GCGTGGAAGT TCTTGGATGC GTGAGCCTGG CGCGACAAAA ACCTGATGTC
GCCACGTATT TGGTTTGTGG TGACAGTGCT TTTTGTACGG ATGTGATAAG CGGTTATCGA
TCCCCAATGT GGCCAAGCGC TTCAAAGCGT GCCGCAGTTT TTCCTATTCA TCATGCATTC
TCCAGATTGT ACATTGGTGT TTTCGATGTA AAAGCACGAA AGAGTAACAA GCAAACAGAC
GCATTTTGTG GAAGAGTCAC CGTTGATATT TGTTCTTTAA GACCCGGGAC TGAGTATGAT
ATAACATTGG CCCTTCGGGC CTCTACATTT GTTTACGATC GTCGTCGACG AGGAGTGGTC
CGCTTGCGCT TTTCTCTTCA TTGGTTTAGC GAGCGCGGCG CTATTCTTTC TTACTTCAAC
CAACCGCGAA GCCTTGTCCA GGCCTGTCCT CTTGTCAGTG GCTCGCCTGT GATTCCGTGT
GCCGAGCCCA GAACATTCAG AAACCTTGCT CTTACTGTGC ACGGTCAAGA TCTTCCTGGA
AAGTATTCCC GGAGCGCGTT TCGGGCAACC ATGCGTGAAT TCAATTTGTA CCAGGTGAAC
ATCCGGCACT TGCTCAAGAC AAGCGTAATT GAGGCTGTTC TCTACGAGAA ACCAATAGTC
TCTTTTTGTT TGTTCCTCGC TGGAATGCAT TGCGTTGTCT CAAACTCAGT ACATATGGTT
CCACCATATT TTCTTGCTTA TCTTTTGATT CAACTGCACG AGAGCTACCA ACACTATGTC
CAAAGTTCGG TATACAATTG TGGATACAAA CCCCTCACTT TCTTTGAGGT ATTTCAAGCT
CTGATATTCA ATACGACAGG ACGAGATCGA ATGTTTGAGT CCATATCCGT GGCCAAGCAA
GCAAAGCAAA GAGGAAATAT TAGGCAACAT AAGCAGCTTG CCGATATGGA TTCTGATAGA
GGGGAAGGGG GTTTGGTAAC TCACCCTCCG GATCATCAAG AATTTCCTTT TTCAGATAGG
GATGCCTACC CCAATTTTGG TGTTGACGAC GCACTCGCAC CGAGTTTGAA GAAAGGACGA
GGTGAGTTGG TGGTGTGTCT ACACTACAAT GAACTGGCGA GTGACTGAAA TCTCAAATAA
TTGTTCTCTG CAGGAGGGGA AAACAGTCTC CATGGAAGAC TCTCTGTGTA CTACACAGCT
ATACCAAAGA CGGATCCAAG TGGATATGTT GACGGCATCT CAAGTGATGA AAGCGGGGAC
GCAGACAATG ACGACGAAAC AATTACGACA GAGACGGGTA TGGATGACAG CATGTTCCAC
CTTGATATGG AGGGGGAGGA TGATGGCTTG GAACCGGATG ACCATTTGGA GCTGGCTTCA
CAATCCAACC TTCCTTTGGC CGCTAGCAAC AGACGACGGA TTAAGCTTGG GCCGGCTCAG
AATACAGACA CATCTGCAGC AGTCAGAGTT CCACCTCAGA TCCACTTGAA AAAAATGGAA
AACATTTTTC ATAAACTTTC TAAAAAGCTG TCTGTTGAGC TTGTTGCAGC ACCTATGGAT
CGAAATCTGG GTGGAACTGT GGACACGTCT CACCTTGCGA TGCGTGGGTC GCTGGCTTTA
ACTACGGAGG CTTTGCAGGC GCAAGAAAAA CTGGGCAAGA AGGCAATTTA CGATGAATTC
GATAGACTCT TGGGTCTAGA GACGAGGACT GCTAATCCAG TTCTTAGAAT TGCATCGGCT
TTTTTAGGTC CTTTGATGCG GATTATCCGA GTCTTTGTGT ATCTGGTCCG CGTTTTATTC
AACCTTACAA CATGGCGCGA TCCGTATATG TCTTTCTTCC TCTTCATTTG CTTGTCCGTG
TTGTGCCTCA TTCTCGCCAT TTTTCCATGG AGAGTGTTTT TCTTTCTGAC TACATTCTTA
TTCCTGGGTC CTCAGGTAAT TTCTCGACCG GGTATAGGAA AGCATACGCT GGTTTCGTCT
AACTTTATAA TGTGCGTTGT TTTTTTTTGC AGAACATTTT TCTTCGCACG CATCTCGAGA
ACAAAGCAGC AAAAACACCC AAGGAGCACA GGGAGAAAAC CGGTAACAAA GATGAAGCGT
ACCCGACGGA GCAGAGAAGA GACCACAAGA CTAGCGAATT ACAATTGGGT GTTTCGAGCA
ATAGTCGCTT AGATCATCGT AAGGTTTTTT TTCGGAAGAA CACAAGTCGT GAACTAAGTA
CTGACAAGCC TCACTTGATT GGACCTTTAT ACCAAGATGA ACGCCCAGTA TTCAGTGTTC
AGCACGGTTC GGTGGCGAGT CGTAAACTTC GGCCTAGATC TGTGGCCATA CCGTACAATC
GTTTGCGGAA GGAGCGATTT TATGATTGGC CCCCAGATCC GACAGTTTCC CGTGCAACTC
CTTTGCACTT TGCCTACGGC GAAGAAACGG AACGCAGACG ACGAGACAAC ATTTTTTCTT
CTGACTTGGT TATGTCGCTT CAGGAAAGGG ATAAGAACGA AAATCGAATC TTCCGACAAC
GATTGCTAGA AGCCTCGTTG GGAGAGAATT GAAGTGGTCG GAATCATCAA TCGGAATAGG
ATGATGAAGG TATGAAAGCG ACTATGTATC GTAGCAATTC GTAGCGGAGA GGAGAAACGG
AGCGAACTGT ATGTGCTACT CGGAAAGATC TACTACTATC ATTTAAAATT CAGTCTCAAA
ACGCCTTTGA GAGTGCTTGT CTTCTACAAA AGGCCTTGTG AAGTCAGAGG TGCAGTTGCG
GAAGCGGCGC AGTAGTTCAC GTGCGTCAAC TGAGACATCG AGAAGATGAC GGAACGATTA
GAACATGGGC
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| Protein sequence | MNSSGHRRLF RWNRDKHGDS FDASTEGGGS SHALPVSKSG SPVPSDSIPK SFAQSRINWE
SGKKYDESSQ DFSGHRSRDD SVVETKLWRN KLTKNLRGKF SPRSGLQIRK RRDKKDLKEE
AESRFLRTTS LSDVDDTLTR NDSRGWHKRN GHPRNLAHAK KRGDDSLEFA RKQSPPSSTV
FFEQGMYSAA SVEELGYETM TGFTDAPKES DQQLEMKRAN YGTGHSKRKF RLRPHHCFEK
ATYMTEEDIY SDSIEPSQSF EFLKSYLAPT AFTEPKGERD GKIEESYGSP ETDGRVGALR
VEVLGCVSLA RQKPDVATYL VCGDSAFCTD VISGYRSPMW PSASKRAAVF PIHHAFSRLY
IGVFDVKARK SNKQTDAFCG RVTVDICSLR PGTEYDITLA LRASTFVYDR RRRGVVRLRF
SLHWFSERGA ILSYFNQPRS LVQACPLVSG SPVIPCAEPR TFRNLALTVH GQDLPGKYSR
SAFRATMREF NLYQVNIRHL LKTSVIEAVL YEKPIVSFCL FLAGMHCVVS NSVHMVPPYF
LAYLLIQLHE SYQHYVQSSV YNCGYKPLTF FEVFQALIFN TTGRDRMFES ISVAKQAKQR
GNIRQHKQLA DMDSDRGEGG LVTHPPDHQE FPFSDRDAYP NFGVDDALAP SLKKGRAIPK
TDPSGYVDGI SSDESGDADN DDETITTETG MDDSMFHLDM EGEDDGLEPD DHLELASQSN
LPLAASNRRR IKLGPAQNTD TSAAVRVPPQ IHLKKMENIF HKLSKKLSVE LVAAPMDRNL
GGTVDTSHLA MRGSLALTTE ALQAQEKLGK KAIYDEFDRL LGLETRTANP VLRIASAFLG
PLMRIIRNIF LRTHLENKAA KTPKEHREKT GNKDEAYPTE QRRDHKTSEL QLGVSSNSRL
DHRKVFFRKN TSRELSTDKP HLIGPLYQDE RPVFSVQHGS VASRKLRPRS VAIPYNRLRK
ERFYDWPPDP TVSRATPLHF AYGEETERRR RDNIFSSDLV MSLQERDKNE NRIFRQRLLE
ASLGEN
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