Gene PHATRDRAFT_49399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49399 
Symbol 
ID7195785 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand+ 
Start bp157131 
End bp157949 
Gene Length819 bp 
Protein Length162 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184070 
Protein GI219127704 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.304124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCTCTCTCT GTTTTCCCTC ATTCTACAAT CATGGGAGAA ACCAAAGCCA CACAAAAAGA 
AGTCCGGGAT GAATGGGAGC GCAAACTCGC TTTGTCGGCG CCGTCACGCG AGTTGCTGGA 
AGAACTAGCC TTGGCCTGCG CCAAAGAGGA TTCACCGTTG GCGACCTTTC AGTACGCGTT 
TGCCCTGAGC AAATCATCGC AAGCTTCCGA ATTGCGCTAC GCCGTTTCGA TACTCGATGG 
ATTGGTTAAG GACGGATACG AACACCAAGT AGATTGCATG TATGGATCCG CCACTGCGCT 
GTATTTGTTG GGCGATCACA AAGAAGCCAG GGTACGTAGA ATGCCAGCCG ATTAACCTAC 
TCCAGTTGGG AATCAATGCA AGGCATGCAT ACGCGTTGAA CGTTGCTGGT TGCTCACAGT 
ATTCTTCTCT TGTGTACTTG TTTGTTTGTA TTATTCGGTA ACAGGCACGC TGTGAGGCTA 
TTTTGCGAAC ACAACCTAGT GCTCGCTTTG CGAAAGAACT GCATTTGGCC TCCATTGAAG 
CCGAAGAGGA CAAAAAACGT GAGCAACTGA AAACCGCGGC CTTAGGTAGT GTGGGTGCCG 
CCGCGGCCAT TGGTGTAGTG GCTGGTATCG CCAGTCTTTT ACTGAAAAAG TAAAATATGG 
AAGAGAATGG ATGGTCGTGT ACCAGTTTTG AGGATTGATC TAAGAAAGGG TGCGTCCGTG 
GTTGACACTT AAGGAGGAAA GCTGTGCGCG TCAAACGTGG TGCATACTCG TTTAGGTTTT 
CGATACAATC TAAAGTAAAT CAGCAAAGGT AAAAGCCAA
 
Protein sequence
MGETKATQKE VRDEWERKLA LSAPSRELLE ELALACAKED SPLATFQYAF ALSKSSQASE 
LRYAVSILDG LVKDGYEHQV DCMYGSATAL YLLGDHKEAR ARCEAILRTQ PSARFAKELH 
LASIEAEEDK KREQLKTAAL GSVGAAAAIG VVAGIASLLL KK