Gene PHATRDRAFT_49336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49336 
Symbol 
ID7195495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand- 
Start bp616922 
End bp617710 
Gene Length789 bp 
Protein Length218 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184031 
Protein GI219127622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGACGATACA AAAGAAATAG ACAAAGGGAA AGCTAGTTGT TCATAATTCG AAAATGAAGA 
CCTACCTGAT GACTTTAACT CTCTTGCTCT CAGCACCCGT TCTCGGCGCA TCATTTATCG 
CTATACATCC TATCTCCACT CACTTTTCCA CACCGATGAC GCTGCTGTCG CCTTCCAAGA 
CAGCGTTGGC GTCTTCCGTT GTAGCGGTTC CTCCCTCGGT AGATTGGCAA GTCCGGAAAG 
CACAAGACAA CGATGTTTTG GAAGTGTACG GTTGGTTTGA GCGAAAAGGA GCTTTTGACT 
TGTCACTAAG TGGGAATCCA CCATCCAAAT TGAAGCCTAA AATCGGCCAA ACGTTGGCTT 
CTATCCTTCC CGATTTACCA AACGGCAACG TTCTCTTTGT TGAGCCAGCT GAAGGAGAAG 
TGACAGGATT TTGCTCCTAT AATCTCAAGT ATTCCGGTTT TGGTCCACCT ATGCTGTGGA 
TGGATGATAT TTACGTCGAT CAAACCAAGC GCTCCAGGGG GGCCGGACAA GCGCTCATGG 
AAGCATTGGT GGATGTGGCG CAGTCCTTTT CGTGTACACA TATGGCTTGG AAAGTTGACG 
AACGCAATGA GCGGGGCATG CAGTTTTACG ATCGGATAGG TGCCGAAATT ACACAAAAGG 
ACGGGACGCT GTACCGCGTG GAATGGATTC CTTCGGAATG GATAGAGTAA AGGTTCGGAG 
TTTTTCGTAT CACAAGACGG CTTATTTTTT GCAATATGCG ACCGTCATTT TTGTTGGCCA 
ACATTCTCC
 
Protein sequence
MKTYLMTLTL LLSAPVLGAS FIAIHPISTH FSTPMTLLSP SKTALASSVV AVPPSVDWQV 
RKAQDNDVLE VYGWFERKGA FDLSLSGNPP SKLKPKIGQT LASILPDLPN GNVLFVEPAE 
GEVTGFCSYN LKYSGFGPPM LWMDDIYVDQ TKRSRGAGQA LMEALVDVAQ SFSCTHMAWK 
VDERNERGMQ FYDRIGAEIT QKDGTLYRVE WIPSEWIE