Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49327 |
Symbol | |
ID | 7195594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 590310 |
End bp | 591643 |
Gene Length | 1334 bp |
Protein Length | 360 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184025 |
Protein GI | 219127610 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTTCTGTTG CTCGAATGTG ACTCACGTAC ACGTACAAAG GGGAAGTTTC CAACCAACAT GCCAAAATTG TCATTTCTTT CTGTTTTCCT CTATTTCGTC CCCGAAACGA GTGGATTCTC ACGTTTGGCG GCACCCAATC CGACTCGTTG CCGATTGCCT CACAGTCCCT ATGGTCGTGC ACGCCTTGCG GATGCCGCTA CGGCCACACG AACACTGCCT ACTCCAGCCA CCACAACCCA TCGCACAATC AACCCGGCCT ATCCGGATCT ACCGTTGGAC AAGTATCTCG CCAATCCTTA CTTTGCGAAA ATCCGTACCG ATTACCCCGG GTTGCAACTG ATTCACGAAG AGCCCTTTCT CTTTCTGGTG CACGATTTCT TGACCGCCGA CGAGTGCGCT CGCTTACGCC GCAAGGCCGA CACGGGCACC TTGCGTCCCC AATTTGGTGG AGGTGCGGTG GAACGAACTT CGTCCGGCGT CGTGTGCGTG AACGACGAAG TCCCCACACT GCGGACGAAG CTGCAAACCC TCACCGGTGT GTCGGACATG GCACAACTGC AACCCCTCAA AATTTCCAAA TACCGACCGG GACAAGTCTT TTCGAAACAC ACGGATGCGT GGCCCACCGA AGAGGCTCCC GTCACGCGAG GGTGGGTGCA GGAACGGGAT TTCTTTGGCG ACGAATCCCG ACCAACCCGC GGATGTTACC CCGCGCGGAA TCAGCCGAAC CACAACACTC TCTTGACCTG CTTTGTCTAT CTCAACACCG TGCACGGTTC TGGATATACG ACTTTTCCCA ATATTGGTCT CCACCAAAGT CGGGACGGTG GCAGTTTCTA CCGAAACCCG ACACCGTTGG ACACGCACGC ACGCGTGGAC GGGAGTGCGT GGGATTGGGA GTATCGCGAC GAGGCTGATT CCGTCCAAAT CGCCCCGACG CAAGGGCTGG CGGTCCTGCA CTTTTGCAGC GTGTTGCCCG AATACGGAGG CATCTGTGAC GGCAACGTAC TACACGTTGC GGAAGCACCA CTGGACGGAC AAGACAAGTA CGTTGCGCAG CAATTCGTCG CGTCTTGTAC CGAATGGAGT CTCCCGGACG ATAGTATTCC GTACGGTCGT GTCTCGTGGG ATACTATCTA ATGGTACCGA TACATTTGAC TGTGAATGGG AGTGATACCA TCTCTGGTGG GCGGCCATGC GTCTAGGGAA CGCTTTCATA CCAGTTCTCG CTACGTTTGG CTTGGCATTT GACTAGATAA GGGTAAATTG AACGGAATGG ATTGACCAGC ACCGGTACGG CACCCACAGA CCGTGCACTG GCATGCAGCC AATG
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Protein sequence | MPKLSFLSVF LYFVPETSGF SRLAAPNPTR CRLPHSPYGR ARLADAATAT RTLPTPATTT HRTINPAYPD LPLDKYLANP YFAKIRTDYP GLQLIHEEPF LFLVHDFLTA DECARLRRKA DTGTLRPQFG GGAVERTSSG VVCVNDEVPT LRTKLQTLTG VSDMAQLQPL KISKYRPGQV FSKHTDAWPT EEAPVTRGWV QERDFFGDES RPTRGCYPAR NQPNHNTLLT CFVYLNTVHG SGYTTFPNIG LHQSRDGGSF YRNPTPLDTH ARVDGSAWDW EYRDEADSVQ IAPTQGLAVL HFCSVLPEYG GICDGNVLHV AEAPLDGQDK YVAQQFVASC TEWSLPDDSI PYGRVSWDTI
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