Gene PHATRDRAFT_49327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49327 
Symbol 
ID7195594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp590310 
End bp591643 
Gene Length1334 bp 
Protein Length360 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184025 
Protein GI219127610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTTCTGTTG CTCGAATGTG ACTCACGTAC ACGTACAAAG GGGAAGTTTC CAACCAACAT 
GCCAAAATTG TCATTTCTTT CTGTTTTCCT CTATTTCGTC CCCGAAACGA GTGGATTCTC
ACGTTTGGCG GCACCCAATC CGACTCGTTG CCGATTGCCT CACAGTCCCT ATGGTCGTGC
ACGCCTTGCG GATGCCGCTA CGGCCACACG AACACTGCCT ACTCCAGCCA CCACAACCCA
TCGCACAATC AACCCGGCCT ATCCGGATCT ACCGTTGGAC AAGTATCTCG CCAATCCTTA
CTTTGCGAAA ATCCGTACCG ATTACCCCGG GTTGCAACTG ATTCACGAAG AGCCCTTTCT
CTTTCTGGTG CACGATTTCT TGACCGCCGA CGAGTGCGCT CGCTTACGCC GCAAGGCCGA
CACGGGCACC TTGCGTCCCC AATTTGGTGG AGGTGCGGTG GAACGAACTT CGTCCGGCGT
CGTGTGCGTG AACGACGAAG TCCCCACACT GCGGACGAAG CTGCAAACCC TCACCGGTGT
GTCGGACATG GCACAACTGC AACCCCTCAA AATTTCCAAA TACCGACCGG GACAAGTCTT
TTCGAAACAC ACGGATGCGT GGCCCACCGA AGAGGCTCCC GTCACGCGAG GGTGGGTGCA
GGAACGGGAT TTCTTTGGCG ACGAATCCCG ACCAACCCGC GGATGTTACC CCGCGCGGAA
TCAGCCGAAC CACAACACTC TCTTGACCTG CTTTGTCTAT CTCAACACCG TGCACGGTTC
TGGATATACG ACTTTTCCCA ATATTGGTCT CCACCAAAGT CGGGACGGTG GCAGTTTCTA
CCGAAACCCG ACACCGTTGG ACACGCACGC ACGCGTGGAC GGGAGTGCGT GGGATTGGGA
GTATCGCGAC GAGGCTGATT CCGTCCAAAT CGCCCCGACG CAAGGGCTGG CGGTCCTGCA
CTTTTGCAGC GTGTTGCCCG AATACGGAGG CATCTGTGAC GGCAACGTAC TACACGTTGC
GGAAGCACCA CTGGACGGAC AAGACAAGTA CGTTGCGCAG CAATTCGTCG CGTCTTGTAC
CGAATGGAGT CTCCCGGACG ATAGTATTCC GTACGGTCGT GTCTCGTGGG ATACTATCTA
ATGGTACCGA TACATTTGAC TGTGAATGGG AGTGATACCA TCTCTGGTGG GCGGCCATGC
GTCTAGGGAA CGCTTTCATA CCAGTTCTCG CTACGTTTGG CTTGGCATTT GACTAGATAA
GGGTAAATTG AACGGAATGG ATTGACCAGC ACCGGTACGG CACCCACAGA CCGTGCACTG
GCATGCAGCC AATG
 
Protein sequence
MPKLSFLSVF LYFVPETSGF SRLAAPNPTR CRLPHSPYGR ARLADAATAT RTLPTPATTT 
HRTINPAYPD LPLDKYLANP YFAKIRTDYP GLQLIHEEPF LFLVHDFLTA DECARLRRKA
DTGTLRPQFG GGAVERTSSG VVCVNDEVPT LRTKLQTLTG VSDMAQLQPL KISKYRPGQV
FSKHTDAWPT EEAPVTRGWV QERDFFGDES RPTRGCYPAR NQPNHNTLLT CFVYLNTVHG
SGYTTFPNIG LHQSRDGGSF YRNPTPLDTH ARVDGSAWDW EYRDEADSVQ IAPTQGLAVL
HFCSVLPEYG GICDGNVLHV AEAPLDGQDK YVAQQFVASC TEWSLPDDSI PYGRVSWDTI