| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49312 |
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| Symbol | |
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| ID | 7195587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011689 |
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| Strand | - |
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| Start bp | 546616 |
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| End bp | 551999 |
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| Gene Length | 5384 bp |
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| Protein Length | 1592 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184017 |
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| Protein GI | 219127594 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ACAAGCCTCG TGAGTATTCT TACCTGCTAA GCAATATACG ATTTACGGGT CTTGATGGGT
GCGGGTCAAT CGACGGTAAC GGCTCCAGAT GAAGCCGCAT TGCGCGAGAG TTTGGAAACG
CAACCGACTC TCCAAAGTTT TTCGTTCGAT GTGGCGCTCG TTCCCGGCTC GGGTCGCTTC
ACGCGAACCC ACCGTCTTAA ACACAAGTCG ATCGAAACTA CAGCCGTGTG CAAATCCATG
TGGATTGCCG AAACAACCAG GATCGAAACT CAGCGGGAAG AATTGGAACG GATTAAGCGA
GTATTGAAAG GGCAGCCTCA TGTCGCACCG TTCACAGCCT GGTTTATTGG AGAAGCCCGA
AGACCCCAAC TCTACCGACC TATTTTTGTT TTACGACCAC ATTTTTATAC TACGCTTTCG
GATCGCTTGA CGTCACGACC TTGGATGCAC CATGTGGAAA AGGTATGGGT GGCAGCGCAG
ATTCTGGATG CTCTGCAGCA TATGCACGAG GCGAACGTGG TGCACGGGTT CCTGACGACG
GAAAATGTGG GCCTGACGTC GCACGGTTGG GTCGTACTGT TGGATATTGC GAGTTACAAA
TCGGACCGAA TACTACCCGA CGACGATCCC ACCGAATATA TGTACTACTT TCATCCGTTG
CAGCACGCCG AAAAAACGCG GGAGAAACGA TGCTATTTGG CGCCTGAGCG GTTCTACACG
CCATCTTCAG AGATCCTGAC GACCAACGTG GCCCCCACAT CTGCGTCGGA CATCTTTAGC
ACTGGTTGTG TGTTGACGGA ACTCTTCATT AATGGTGAAA GATGTATGGA TTTAGGCGAT
CTGATGGAGT ACCGAAGACA GAGAACGATG ACGTCCGGGA CCCAGCAGAA ACTTAATAAG
ATCGAGAGCT CTCACCTACG AGCAGCGTGT CGTCACATGC TTAATTTGAA TCCGGAAGAT
CGACTTTCAG CTCTGGCATA CAGGGAACGC TTAGAAGCCA CAGAACAAAT ACCACCCCCC
TTGAAACGGT TGACAAAATT GGTTGAGCGC CTTACGACCT CCCACTCGAC ACCCGATGCA
CGTGTTGCTT TGATGGCCGC GGAGTATCCC CACGTGCTTT GGGAAACTAT GGGGATGCAA
GATACCGTTG GTTGCGCTTA TTTTGCGAGA GTTATGGGAC CGGTAATGTT GAACCAACTA
CCCGAATCGA CTAGTGAAAG TCCGACAATT GCATTGTTAA AGGACAGCAA GAAGACCAGT
TTGTCCGCTA AAGACGCGTT ATTCGCCGAG ACGGAGGAAT TGCTGAAGCA GCTTGAGTCG
CTCGATTTCG AAGGGGAAGA AGACTCTGTT GAATCGTCTG ATCTTGAGGG AGCTTTGGCT
CAAGCCGACG CAGTCAAAAA CGACGAAGGT CCACCATCTC CTCTCTCACA GGCTTCGCTT
CTGATTTACC TGCAGTCTGT GTTGTCGACA GTTCGTCATG TCCAACGTCC CTCCTCGAAA
TTGGTGGCGC TTCAATTAGT CAATCGGATC TCTCGCTGTA CGTCGGATGA AGCCAGAATG
CAGCGAATCG TTCCGGTAGC AATATCTCTA CTCCATGATC AAGACGCTCT GGTACGAGCT
TCTTCTCTTC GTCTTTTAGC TTTTACGCTG TCGATCATTC AGACATTCCC ACCATCGGAT
TCTAACGTCT TTTCCGAGTA CGTTTTTAAA AAAGTTGCAC ATATGATCAC GGATCCGTGT
TTGAATGTTC GCTTGGTCTT TGCTGAAAGT GTCGTAAGAT TGGCGGAAAC AGCACATCGA
TTTCTTGATA TTACGCATGC CGTACGTCTG TATGAAGCTG TTGGGAGCGG TCCTGGAAGC
GGGCTCGTGT CAGAAGAGGC AAATTCGTCT CGCTCTACAC TGTTCGCCGA CGACATTACC
AAGCTTCTGG ACACCTCAGA GTCTGACAAG CCAGCTACCG AGAGAATGGA GAGCTCGCTG
TCGTCCGACT CTGGCCAATC CGAAACCGCA TTGATGGCGG CAGGGAAAAT TATGATCAAT
AGCACATATG ATGTAGAGCT CTCCGCCTTG CACGAAATAG TTTCAAGATG GGTTGTACAC
ATTACCACTG ATCAGTCAGA ACATTCGTCT TTGCCAAAGC GAGCGTTGTT GAAAAATCTC
GGTGCACTGT GTAATTTTTT TGGGCTCGAT GGCGTCATGG CCTTTATTTT ACCACAAATT
TTAGCTTTTC TCAACGATCG AAAAGACAGA GAACTTCGGT CCTCTTTGTT TCAACATTTA
CCGTATCTTT GTGGAACAAT CGGACGGGCC GCTACAGAAG AGTTTGTCCT TCCCTGTGTT
GAAATTGGCC TTGTCGACTG TGAGGAGATG GTCGTCGCGG ACGCCATAGC GTGCCTCCGG
AGGCTCGTCG AAATGAATCT AATCTCTCGA TCAGTTCTCC TCGGTGCAGG GACAGCCTCC
ACTAGAGGTG GAGTTAGTTT GCTCGAACGG TACGCTCCAC TTCTCATGCA TCCTTGCTGC
GAAGTACGGA AGCAAGCGCT AGATTATTTT GCTTCGATTT GTGGGATTGT CGGTTCGCCG
GATTCTGACG TTTACGTATA CCCGATACTT TTGCCGTTCC TCCGTTACCG TGCTACTCGA
GAGCAGTGCA TCTCGCCCGA TGCACTGAAG GATTGCGTTA AACTTGCTTG GACAAGGAAA
AGCTTCGATA CTGAACTCGA ACGCTTGATG TCAGTCCCTT CCTTTCAGAG TGCGGGGACT
TGGACAACCG TGTCAGTTAG TGGTGGCCTC CCACATCGAA GTAAAGTTGT TCAGGAAAAC
AAGCAATCTA CCTTAAATGT CGAGCGAATA GGACAGTTCT CCGTGCAAGA AAATGTTTCG
GCGTACTTTC GCATGCTTGC CCGTCATACA ACTCAAACTT CCAATCAAGA CCTGCTCGCA
GGGAAATCTA TCTCCCTTTT ACCGAGTGGG ATTCAAGGTT CAGTTAAGTC AGCCCAAAGT
GTCATGTTTC CGCGGCATAA TGCGAAAATG GTTGACGGAG CAAAGATTCC GGAATGGTAC
GCAAAACTTC GCGACTCAGC AGAAGGACAG CATCTTTTTG TGTCGGAGAC TTCTGCAATT
CGGTCAGTGT CGACACTCGG ACATGTATAC GGGCTATCGA TTATGGGTCC GTCTCATGGA
GAAACCGGAA AAATAGTGGG TGCAGCAGAT GGTTCTAATG GAAATGATGA AACTCTTTCG
AGCTATCTCA AAACGGGAGA AGCAAAATCC ATTGAAGCAG CAAATTTGGG AGAATGGGGA
TCCGAAGTGC TATTGGACCC TGAACTTGTG GATACGACAC TTCTCGTGAC GAAACTGAAG
GCTATGAACG TCCCACCGTT ACCACTAGAT CTAGGAGATC AGTTTGCTCC GGTAATATTG
CCAGTTCCTA TCCGAAAGAA CGGAGGTAAG CAGGGGGTTG TCCAAGCGGA CTGGAGGCCT
AGGACGAATG CCTTGATCGC ATCAAGTACC ATATCTAGCG GTCATACAGC GCCAGTTGTT
CGACTTGCAG TTTCGCTGGA CGGTCGCTTC TTCGTCTCCG CTAGCCATGA TGGCTCTTGC
CGTGTATGGG AGACTCAGAA GGCTGAGCAG TCTGTTGGAA TCCTTGAAAG CAGCCTTGTC
TACAAGGATC ATTCGATCAC TGCCCCTGTC CGAATAAATG ATATTGCTAT GGTCGAAGGA
AGCCATTCAC TTTTTTCTGG AGACAGCGGT GGTTCTCTTC ATGTTTGGCG CGTAGATATG
GTCGAATCGT CTGCAAAACC AAGCTTTCAA GGAACTCTAC CGACAAATTT GAATCACTCC
AAAGTAGTAG GCTCTAGCAA TGTACGAAAG GTGGACGCCA AAGAGGGAGA GGTCCTTGCT
TTGTCGCATT TTAATACCAT TTCCGCTTCG CTCTTGGCAT TTGCAACCCA GTCGGGTGCT
GTCCACTCCT GGGATCTGAG GTGTTCTAAG GAACCGTTTG TTTTCAAGCA CACTCCAGAC
TTTGGGTTGC TTACCAGTAT GTCGATCGGC AGCGATAGAC AATACATAGT GACAGGAACT
TCGAGAGGGT ATCTAGCCTT GTGGGATGTT CGGTTTCAAC AACCAGTGAA AGTGTGGCAG
CATAGCCGCA GAGCTCCAAT TCATCGTCTT GCTACTTCCT TCGTTCCCCC TCCGCAAATG
TGGACATCTC GCGTAAACGA ATCAGAAGCC CGTCCTTTTC TTTTTGTCGC GAGTGGACCA
AACGAGACCG GAATGTTTGA TATGAAAACC GGCTCTTGCA TGGAATGTTT CAGGAGTTTC
TCTAGCAATT CTCTAGATTT GCAATCCGAG TTGGGCCTTC TTCCAACCCT CAACAATATC
GACATCTCCC GGAGGTCCAG CGGGGAGTCT TTAGGCATCA ACTGTCAGCG CCTGAGAGAC
ACCGAGTTTG TTTCATCGAA AGGATCGATT CATTGCATGG TTGGAAGTAT TGGAGCGAGT
CACCAAAGTT TCCTTGTCAC TGGGGGTAGC GACTGTCGAA TTAGATTTTG GGACTTCTCC
GATCCTTCCA AGTGCTTTAC ACTTGCGGGA CAGGAACAGG GCCAGAACCG ACCATACTTC
GAAAGGATAG ACCTCGGAGA AGGGAAGGGG AGGCTCATTG CTTGTCGGGA TGCAGAGTCC
GGACCAGCAC CGAGCCATAT GTCAAGAAAA TTGCACCAAG GGGTAAAAAG ACCCGACCAT
CATCACACCG ATTCAATCCA GGATCTGAAA ATCATTGATG GGTGTTCGCT TATAAGCTGC
TCGAGAGACT CTACGATCAA GATGTGGCGA TAGGAAACAA TCTTATTATT AGATGTCCTC
ACTTACTTCG ACCAATTTCA GGTCTTTCTA AAAGAAAGCG GCATCGAAGT TCTCACATTT
TCCGTCCGCG AGTTTGCTGT CGTCGCCTAC AAGATCATCC TGGGGGTGGA TGCACTTGAT
CGCGTTCCAG CTAGACGCCG ACATGGCAAT AGGGGGAGCG AAAGCCATGT TCTTTTCCTC
TTGTCCCGTA CTCAGACCAG TATATTCGCC TGCTCGATAC ACCTGCCCAC TGAGATTTTC
TGCTAACCCG TTCTGTCTCC AAAATGAAGC GTTAGTTCCC TCGGGGGTGC TGCGTTGGTC
CAGAAAGCTG GCGTTGTGAG AAAAAGGACG CCTCTGGTGG TAGCTAAACG CGTTGCCATC
GATGCAAGCC GGAACGCGAT TTGACAACAT TACTCCTAGC CCACCCTGTT GAGATTGATC
AAGTAGGAAT GGCGTCTGAC TCGGGCGCAT TTGGTTGTGA AATTGAGAAC CAAACTGTAC
TCGGTGATCC TGATAGGCAC TGTTGAACGA CATTGGTTCA AATC
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| Protein sequence | MGAGQSTVTA PDEAALRESL ETQPTLQSFS FDVALVPGSG RFTRTHRLKH KSIETTAVCK
SMWIAETTRI ETQREELERI KRVLKGQPHV APFTAWFIGE ARRPQLYRPI FVLRPHFYTT
LSDRLTSRPW MHHVEKVWVA AQILDALQHM HEANVVHGFL TTENVGLTSH GWVVLLDIAS
YKSDRILPDD DPTEYMYYFH PLQHAEKTRE KRCYLAPERF YTPSSEILTT NVAPTSASDI
FSTGCVLTEL FINGERCMDL GDLMEYRRQR TMTSGTQQKL NKIESSHLRA ACRHMLNLNP
EDRLSALAYR ERLEATEQIP PPLKRLTKLV ERLTTSHSTP DARVALMAAE YPHVLWETMG
MQDTVGCAYF ARVMGPVMLN QLPESTSESP TIALLKDSKK TSLSAKDALF AETEELLKQL
ESLDFEGEED SVESSDLEGA LAQADAVKND EGPPSPLSQA SLLIYLQSVL STVRHVQRPS
SKLVALQLVN RISRCTSDEA RMQRIVPVAI SLLHDQDALV RASSLRLLAF TLSIIQTFPP
SDSNVFSEYV FKKVAHMITD PCLNVRLVFA ESVVRLAETA HRFLDITHAV RLYEAVGSGP
GSGLVSEEAN SSRSTLFADD ITKLLDTSES DKPATERMES SLSSDSGQSE TALMAAGKIM
INSTYDVELS ALHEIVSRWV VHITTDQSEH SSLPKRALLK NLGALCNFFG LDGVMAFILP
QILAFLNDRK DRELRSSLFQ HLPYLCGTIG RAATEEFVLP CVEIGLVDCE EMVVADAIAC
LRRLVEMNLI SRSVLLGAGT ASTRGGVSLL ERYAPLLMHP CCEVRKQALD YFASICGIVG
SPDSDVYVYP ILLPFLRYRA TREQCISPDA LKDCVKLAWT RKSFDTELER LMSVPSFQSA
GTWTTVSVSG GLPHRSKVVQ ENKQSTLNVE RIGQFSVQEN VSAYFRMLAR HTTQTSNQDL
LAGKSISLLP SGIQGSVKSA QSVMFPRHNA KMVDGAKIPE WYAKLRDSAE GQHLFVSETS
AIRSVSTLGH VYGLSIMGPS HGETGKIVGA ADGSNGNDET LSSYLKTGEA KSIEAANLGE
WGSEVLLDPE LVDTTLLVTK LKAMNVPPLP LDLGDQFAPV ILPVPIRKNG GKQGVVQADW
RPRTNALIAS STISSGHTAP VVRLAVSLDG RFFVSASHDG SCRVWETQKA EQSVGILESS
LVYKDHSITA PVRINDIAMV EGSHSLFSGD SGGSLHVWRV DMVESSAKPS FQGTLPTNLN
HSKVVGSSNV RKVDAKEGEV LALSHFNTIS ASLLAFATQS GAVHSWDLRC SKEPFVFKHT
PDFGLLTSMS IGSDRQYIVT GTSRGYLALW DVRFQQPVKV WQHSRRAPIH RLATSFVPPP
QMWTSRVNES EARPFLFVAS GPNETGMFDM KTGSCMECFR SFSSNSLDLQ SELGLLPTLN
NIDISRRSSG ESLGINCQRL RDTEFVSSKG SIHCMVGSIG ASHQSFLVTG GSDCRIRFWD
FSDPSKCFTL AGQEQGQNRP YFERIDLGEG KGRLIACRDA ESGPAPSHMS RKLHQGVKRP
DHHHTDSIQD LKIIDGCSLI SCSRDSTIKM WR
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