| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49236 |
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| Symbol | |
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| ID | 7195534 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011689 |
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| Strand | + |
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| Start bp | 321454 |
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| End bp | 322832 |
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| Gene Length | 1379 bp |
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| Protein Length | 396 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183854 |
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| Protein GI | 219127254 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.011629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCTACAGGG AACGCTACAA ATCTACCATC ATGCATTTAT CTCTTCAGGC CATTAATGCG
GACGACTTTG CTGTACTTGC CAACAAGCTA AAAGCTGAGC TTGGCCAAGA GAAAGGGAAC
CATATTCACG GGAGCATTAT TCCGCACGAA AATGATATTC TGCTTGGCAG AGGTACGATT
TCTAAGAGGT TCGAGCATGT GTTGAGCGCT CTCACTGATA AAGAAAACGC TTGTGTATTC
GTTGCGCATC TCTCTCACCT GGCTTTTTTC GACCAAGTGT AGGAGGCAAG AATAACCAGC
ACTTCGGAAA TATTCAACTG CGAAACATGA CTCGGCAATT CTGCTCCGCC TATTACGGCG
CCACCAAAAA GGAAAAGCCC GCCGTTGCTC GAGGTTTGGT TCAATGTATC CAGAACTTAA
ATCCACCGGG ACGTTTCCTG AAGCATTCAT TGGGAGGGTG GGAAGAGGCA ACAGCATCTG
TCGCTCAAGA GAAAGCTAGC CAGAGCCTCC GTGATACGGT GGCGTCAGTC TTAAAGGAAG
CAAACATCCA GGATGGCACA CACCCGAAAA ACGAAGTTTT CACTCAAAAA TGTCTTGACG
AACTACATCC CGGGTCGAGT CGCCATCCTA AATCTGCAAC CAAAGATTCA GTCTTATTTC
AAGATTCTAC TGAGCAATTG CCTAACAAAA TCGCCCGTTC ATATCAGGAG AGTGAGTCTT
CATGTCAGGT TCGCATGCCC GATAGCTTAG CTGTGAACTT TGGCGACCAA ATGTTACTGT
CGATGGACGC GACGTCGTCT ATCTCCCTCC AAGAAGAGTT CAATGAAAAT GGCAAGAGAA
GTAGAATCTC TTTCTTAGAA GCCGATTTGA ATAGCAAGAT CCAACGTTTT TCTACGGATC
GCGCCTTCTG CACCATGGGG CTTATAGACA ATTCCGATTT TAGTTCGATG GCTAACTCGA
AGCCCCAGTA CCAGATATCG TCCCAGGTAA CAACCAGTCG TGTGCCATGC ACAACATCGA
CAAAACTCTC GTTCGACACC TGGACTGGAA ATGGTGGCTT TAGCCTCAAT GATGCAGCTC
GGTACGCTCA CCTCGCAGCG CAAAGGAAGA GGCAGTTCAG CACCAGCATA AACAGCGAAA
GCAAGGAAGA TCAAGAGATT GAACTTTTCA GTGCTGATGC GCTCGATTCT ATTGTTTGGG
ACGACGATGA TATCAAGCTT GATAGTACCT CTTCTTTTCA ACTTGCTCCG GGTCAACACC
AGGCCGCAAG CGCTTGGGAC GACGAAGACG CTTTTCGTCG GCGCATTAGG AATCTCTTAC
AGGAATTGTA GCCGCTGATA CATCATCATT TCTAAAATAA TATATTTGCT TGTGTGCGT
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| Protein sequence | MHLSLQAINA DDFAVLANKL KAELGQEKGN HIHGSIIPHE NDILLGRGGK NNQHFGNIQL
RNMTRQFCSA YYGATKKEKP AVARGLVQCI QNLNPPGRFL KHSLGGWEEA TASVAQEKAS
QSLRDTVASV LKEANIQDGT HPKNEVFTQK CLDELHPGSS RHPKSATKDS VLFQDSTEQL
PNKIARSYQE SESSCQVRMP DSLAVNFGDQ MLLSMDATSS ISLQEEFNEN GKRSRISFLE
ADLNSKIQRF STDRAFCTMG LIDNSDFSSM ANSKPQYQIS SQVTTSRVPC TTSTKLSFDT
WTGNGGFSLN DAARYAHLAA QRKRQFSTSI NSESKEDQEI ELFSADALDS IVWDDDDIKL
DSTSSFQLAP GQHQAASAWD DEDAFRRRIR NLLQEL
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