Gene PHATRDRAFT_49212 details

Gene Information

• Locus tag: PHATRDRAFT_49212
• ID: 7195519
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: +
• Start bp: 242101
• End bp: 244243
• Gene Length: 2143 bp
• Protein Length: 561 aa
• GC content: 55%
• Product: predicted protein
• Protein accession: XP_002183838
• Protein GI: 219127221

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCCAACACTG GCGTGTTATT TCCTTGTGGA CTACGTACGA GACTTTTTCT CTCTTCCGTA 
TCGAGGTCTC GACGATTGGA TCGACGAGAT TATCGCTACC GAACGTGAAA AGTGGAGAGA 
AAGGGGTAAT TTGAGTACAC GGAATCGCAG TTTCAACCAC AGGTTGCTGC TAGTCTCTTT 
CCGTTGTTTC ACCGGTACTC TGCAAGGTAT GCGGCAGTGC TGAAGACGAG GTGATTATTT 
CTTTACAGTG AGTCATCCGC CGGAATATTT GGACAGTAAT AGAATCATAA GTATGAGCAG 
CAACAACAGC ACCGATTGGT CGCGCAAGCG CAGTCGGGGC GAGGAAAAAC TAGACGAGAA 
GCAGGGAGAC AAAGATCTCT CTTCCACGGC TCCTCGCGAT CCCCATTCCC CTCCGCTTGG 
AGGCATTGGA CCTCCTCCTC CTCCACAGGG AGGTCCTCCA CCAGGAAATT CTAGAGGAGG 
CGGCCCCCCG CCCCCGTCTC ACCAAGGATA CGGAGGATAC CCCCCGCCGC ATATGGGTTA 
TCCTCCTCCT TCCGGTCCGG AAGGACAGGC CCCCTATCCT CCCAGAGGCT ACGAAAACGC 
GCCTCCTTAC CCAGGCCCTG GGTATGGACA GCATCCTCCG GGATATCCTC CCTACGGAAT 
GCCACCTTAC GGCATGTACC CGCAATACCA GCATTCCATG TACGGACCCC CTCCTCCGCA 
CCACCCCTAC CCACCGCACG GACAACCCCC ACAGCAACCC TACTATGGGG ATCCCAACAT 
GCCCGGCGGG GGCAACAGCA ACGGACCCCA TCCTCCCTCA TCACGCTACG ATGCACCACT 
GGAGGAACGG AGCGGACCGT ACGGTGGCAA TGCCGCTTCG GGTGGTCCCA TTGCACCCCG 
CAGAGGAAGT GGCGTCGATC GGAAACTATC CCGGGCCTCG GCCGAGTCCT CCCGTGCCGA 
TGACGACGGA GACACGGAAG GCGATGACGA CAACATTGTC CCTGGCGCGG TGACGGCGCG 
TCTCAAAACC TACATCAAGC CGCGGACTCC GTCCACTCGC GAAGTTCTGG ATCGCCGAGC 
ACGCAAGAAT GCACAGTCTC GAGCACGCGC GGCGAAATTG CGTTTGCGCA TTGCGGAAAT 
TGAAATGAAG CCAGAAGACG AACGCACGGA AGAAGAAATT CATTTATGGC AACAGTACGA 
ATCAAGGAGG CAGCGGAAGA ATGATCGGTC CCGCGAACGC GCACTGGAAA AGAAAGAGGA 
AATTGATCGC ATTTTGGCCA AGCCCGATAA GAAGCGAACT AAAATCGAAC GCCAATTTTT 
GGAAACCGCT TTGTCAGCGA AAAAACGTAA AAACGAAGGC GATCGATTGC GGCGACAGAG 
ACTTAAGGAG CTGGGTTTGG CAACGAAAGG AACTGGAATA AAACCTGGCA TTAGTGCTCG 
TGGCCCACTT CCGCCTCAGT ACCAAGGCAT GGTGAATCCG CCGCCGCACC ATCATCCCAT 
GTACGGACAG ATGGGCGGTA TGGGCGGACA CCCGCATCAC CCAATGGGAG ATATTCCCAT 
GTCACCGCTA CCCAGCATGC CCCACCATCA ACACCATCAG TATGCTCCCA TGCAGTCGCC 
ACACTTTGGA TCGCCTACTA TGATGACCCA CCCGCATCAC CAACCATACG GCTACCCGAG 
TCCGCAGCGC AGAGGCCCTC ACGGAACCAC CAGTCGCCAT GAGGGTGGTA TGCCCTACAT 
GCCACCAGCG CAAGGCTACG ACGCAAGTCC GCCTTCACGT CATCCTCCTC CGGTGCAACA 
GCGTCGCAAT CCGGACGGCT CGATGAGTAT TTCGATTGGA GGTAGAAGTG GACAGCAACA 
AGGAGGGCCT CCTTTTGGCG GGGAGGTCCG AGGAGATGAC ATATCAAATA TGATGATGGA 
CAACGACAAC CGTGGTGGAT ATGATCGGAG TGGACCAAGA GATATCAAGG ACGAGTAGGT 
AAAGACGCTG CGTGCGTTCT GAATGTTTCA AAAACAAGTT TGTTTTGTGA AAGAGTGACG 
AAGCCCTCAG GCATTGTTGA ACAAAGCTTA AGGGTAGAAT TTAATGTTCG AGACCATTGT 
GGCCTCGCAA CTAGTATTTA TGTAAATCTG TTTCTGCAGA GTT 

 

Protein sequence

MSSNNSTDWS RKRSRGEEKL DEKQGDKDLS STAPRDPHSP PLGGIGPPPP PQGGPPPGNS 
RGGGPPPPSH QGYGGYPPPH MGYPPPSGPE GQAPYPPRGY ENAPPYPGPG YGQHPPGYPP 
YGMPPYGMYP QYQHSMYGPP PPHHPYPPHG QPPQQPYYGD PNMPGGGNSN GPHPPSSRYD 
APLEERSGPY GGNAASGGPI APRRGSGVDR KLSRASAESS RADDDGDTEG DDDNIVPGAV 
TARLKTYIKP RTPSTREVLD RRARKNAQSR ARAAKLRLRI AEIEMKPEDE RTEEEIHLWQ 
QYESRRQRKN DRSRERALEK KEEIDRILAK PDKKRTKIER QFLETALSAK KRKNEGDRLR 
RQRLKELGLA TKGTGIKPGI SARGPLPPQY QGMVNPPPHH HPMYGQMGGM GGHPHHPMGD 
IPMSPLPSMP HHQHHQYAPM QSPHFGSPTM MTHPHHQPYG YPSPQRRGPH GTTSRHEGGM 
PYMPPAQGYD ASPPSRHPPP VQQRRNPDGS MSISIGGRSG QQQGGPPFGG EVRGDDISNM 
MMDNDNRGGY DRSGPRDIKD E