Gene PHATRDRAFT_48981 details

Gene Information

• Locus tag: PHATRDRAFT_48981
• ID: 7195253
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: -
• Start bp: 216850
• End bp: 218936
• Gene Length: 2087 bp
• Protein Length: 639 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002183699
• Protein GI: 219126929

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGAAAACTCC CAGAAAGAAA CGCATTCTCA AAAGTCCATG CTAGAGTATG GACATCACTC 
TCAGATCGGT TTTGAAATGG GCAGTGACAT CGAGTCAAGG TCCGATGTTT CGTCCGCGAA 
AGAGTTGCAG AAGGCGACGG ACCGACCGAC TGCGATGCCA CGGAATGCCA GCACACCTGC 
AAACACCATC TCTGAAGTGA CAGAGCAAGC CGCAGTCGAC CACGTCCCGT CAGAAGATGA 
ACAGGGTCCA CTCGTTGATG CTGGTACGCA CAAGCGACCG TCAGACTCGG AGATACTTTC 
CACGCCACGA CGTCCGGTAC TCGGCCGCTT GGATTCTACG ATGGCAGTGG CAGATCAAGG 
CTCTCAAAGT AGTTTGAGCA TTGAATCAGC GACGGCCCTT GCGGCTACTG AGCCCGATCG 
CCTTGTAGTC GATCGAACAC CAGAAAGTAC CTCTGCAGGG ACACCGGTGC GGGAGCGCTC 
GTCCCAAACT CCTGCAAGAC GCACACCGCT TTCATCGGGA AAGAAATCTG GACGAATTGT 
TATTTATGAC CCGAATGAGG ACTCATCGAC GGAACCAGGT ATGTATGCGC CGGATCGAGG 
CGAAATCGAG CAAGAAGAAG AAGTCGCGGA TAACTTATCC CGTTCTGATA GAGCGGAAGA 
GATTGTCGAC AGCAGGAAAG CCCGACGATC CGCTGGCAGC TTGCCAGCGA CACCAGACGA 
CAAAGAAGCT GGCTTTCTTT TGCACGATAC ACACCAAACG GGTACCCCGG ACATTGACAC 
AGTTCGGCAG TCTCAATCTT TGCTACGGAG TGGACGGTTA CAGAGAAACA CGCTGTTAGA 
GTCTGATCGC CAGGAGAGTG ATAGCGAATC AGTGGCTTCC GTCGTTGCAA AGGTGCTTGA 
CGATCAGGTG GACTGGTCGT CCAAGACTGT CATTCAGCTG AAACAAGAAC TAGAGAGTCG 
TGGATTGTCA ACACGGGGCA AAAAAGCGGA GCTCATTGAT CGCTTGACCG AAACAACTAG 
TGTTGGAAAG AAGGACGAAG GAGTACAGGA AGAGACGATC AAAGCCGAAA GTGATACGAC 
TTCAAACCAC GAACGTTTGG ACGAAGAGAC ATCGAATGAT GAGTCATCAG AAGGGGATAC 
CAAGGTTCCA ACGGAACAAG TGAACTGGTC GTCCAGGACA GTCATCCAAC TAAAACAGGA 
ATTGGAGAGT CTTGGACTAT CCACAAGGGG TAAAAAGGTG GAGCTCGTAG ATCGAATATC 
CGCCGCAAAG AGTGCTGAGG ACGAAGACGA AGAAGCAGTT GACGGAACAC CCGAAGAAGC 
CGTACCGTCA GAACTCGAAG ACACAGACGG AGAGGCAGTC ATCGACTGGT CCCAAAAAAC 
GGTCGCTGAT CTTCGACGAG AATTATCTCG TCGCAACCTG TCAACCAATG GTCGAAAAGT 
AGAGCTAGTA GCTCGACTGA CACACGGCGA TGAGGAAGTT GATGGAGTCT CGGTTGCATC 
CAGCGAGTCC GCCGGTCAGG ATGAAGGGAT CGATGAAGGC AATGGGGACG TTCGTATTGA 
CTGGTCCAAG AAGACTGTTG CTGAATTGAG GGCGGAGCTT GGATATCGTG GGTTGTCGAA 
GGATGGTTTG AAGGCCGACC TAGTCGCCCG AATGGAACAT ACCACCGCTG GCGAAAAGAC 
GGTGACCCCA ACGAAAAAAC CGGCAACTAG AACGAACGAA GAAACTTCCG TGGCATCATC 
GACTCGGCCC GGTAGTGGGC GCCGCACGCG AGCTCGCGAC CACGAGAAGG AGAAGCAGGA 
CGATCCTGTC GGTATCGACT ACGCCTCGGT AGCCTCTTCG ACAGCACGTC CATCTCGGAA 
TCGTACCAGA GCCCAAGCCA ATGATATAGG TTCCACTACC GGTACTCGTG CTTCGCGACG 
GGCCACAAGC CGGCGCTCGA AGCGAACCAC TCGCTAGTTG CATTTCTTCG CTTTGCATGT 
CGCAAGAATA AGAGTAGTCT ATTTTGCGTC TATCAGTAAG TATGACTCAT GTCAGCTAAA 
GCACTGTGGC GGCAGAATCT GGAGATCTAG CTAGCATTTT TTGTCTC 

 

Protein sequence

MLEYGHHSQI GFEMGSDIES RSDVSSAKEL QKATDRPTAM PRNASTPANT ISEVTEQAAV 
DHVPSEDEQG PLVDAGTHKR PSDSEILSTP RRPVLGRLDS TMAVADQGSQ SSLSIESATA 
LAATEPDRLV VDRTPESTSA GTPVRERSSQ TPARRTPLSS GKKSGRIVIY DPNEDSSTEP 
GMYAPDRGEI EQEEEVADNL SRSDRAEEIV DSRKARRSAG SLPATPDDKE AGFLLHDTHQ 
TGTPDIDTVR QSQSLLRSGR LQRNTLLESD RQESDSESVA SVVAKVLDDQ VDWSSKTVIQ 
LKQELESRGL STRGKKAELI DRLTETTSVG KKDEGVQEET IKAESDTTSN HERLDEETSN 
DESSEGDTKV PTEQVNWSSR TVIQLKQELE SLGLSTRGKK VELVDRISAA KSAEDEDEEA 
VDGTPEEAVP SELEDTDGEA VIDWSQKTVA DLRRELSRRN LSTNGRKVEL VARLTHGDEE 
VDGVSVASSE SAGQDEGIDE GNGDVRIDWS KKTVAELRAE LGYRGLSKDG LKADLVARME 
HTTAGEKTVT PTKKPATRTN EETSVASSTR PGSGRRTRAR DHEKEKQDDP VGIDYASVAS 
STARPSRNRT RAQANDIGST TGTRASRRAT SRRSKRTTR