| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48885 |
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| Symbol | |
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| ID | 7195165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011687 |
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| Strand | + |
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| Start bp | 576592 |
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| End bp | 581320 |
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| Gene Length | 4729 bp |
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| Protein Length | 1565 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183383 |
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| Protein GI | 219126268 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.733997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGCAA TTGACGCGTC TGGAGGGCTG GATGGCTCGA TGTCAACGGA TAACGCACTC
GTCGTGGATG CTCGGGACGT GGATACGGAT ACACACAAGG CAACCGAGAC AGTCGCCTCG
ATGGAAACGT CGGAATTGGA CTCCGACACG TTCCTGGATA GCACTCCGAG CCACCTCAAC
AGTACGAACA CTAGCAACAG CAGCACTGGT GTTGATTTCG AGTCATCCGC AACTACTGCT
TTGCAGGAAG CAGTGAAAGT TGAATCCGAG ACAAACGTAG AGGCCGACGA CGAGACCGTT
GACGCTCCAT CCATCCAACA TATCGTGTCC AACGAAACGC CCACGAGCGA CACTGAAGGA
CTGGATTCCA GCGACATTAC AATCGTGACA AACAGTACTA CAGAAACTTT CACCTCTATC
AATCGTACTG ATCCGACGAG TCCCCATCCT CCCGATGCTA TAACACGGGA AACCCTGCTA
TCTCACGCGA CGACCACCAG TAGCAGCACC AACGAAGAAA GCTCTCTGCG GGTGGAAACT
TCCCTCGATA CCGCCACCAC TCCTACAAAT CCCATGGAAG TCCAAACGAA ACAACCGCAA
AAAAAGGCGG AGGATGAAGA GGACGACGAC GTGTCAAGTA AAGCGGCAGT GGCTTTGGCT
GCGGTGGCGG CCGCCGCCAC GGCCAATCAC AAGAGCCCCG CCGAAGCCGC CAAAGAAGCT
CGGGCAGCCG CGCAATCCTT CATTAAGCCC GCCGATCATC ACCATGGGCA TTCGGTCTCA
TCGGTCAAGC GCACTATCCA AACGGTGCCG CTCGCGACCG TACAGACCCA TTTGCGGGCC
AAGGCACTCG AAACCGGCTC TGTTGTCGCC GATAAATTGT GCCAAGGAGA AAACGATGCC
TTTTTGCAGT ATTTGCTCCT TCTCGAATAC TTCCGAGCGA CGGTTGTCCA TGAAGACGAT
GATCCGGATC ACCTGTCCAT TGGCTCCAAC CATAGCCAGC ACGAACTGGA GCAAGCCGCG
AGAGCAGCTG AAGCCTGTGA CAAGGTGTTG ACCCTGCTGA AAAAAATTGA TCTCGCTTAC
GACAGCCTGG TCAATATGCT ACCTGCGGAA GTGGAACGAC TCCAGCAGCC AAGCTTTGAC
GAGGATTCCA GCGACTACGA TCAAGACTAC GAGACGCCAG TGGTCATTCC GGATTTACTG
CCCCCCTGTA CCTTTCCTGG CGGTGACAAG ACCGTCGCAT TTTTTAAAGC GTGTATGGGT
ACCGAAGGAG AAGCCCCTGC CATTGCCAGC GACGACACAA GCCTGGAGGA GGTGCGCGAA
CAAGCAAATT CAATAGACGG TAATGATTCT TTGGATCAGC CATCGACACC TACTTCCAAA
GGCAACGCTT CCCTCATACC GCCTGCGTCT CCCAAACATC CCATTGCGTC TAACACCAAC
GTTTTTTCCA TGTTTCGCCG AAACACCACG CCATCCAAGG GTATATTGGG CTCTTTGCGG
CGTCGGACGG GTAACGCGAG CACGACCGCT CGGGATACGG ATTCGAGTCT GCGGGTTTCG
GAAACTACGG AATCTACCCA GGCTCCATCC TGCCGACCGG GGGAGTATGT CGTCAAGATT
GAACGGGAAA TGCTGGGTTT GACGGTTGAA AATGTACTGG AACGTACCGT CGTGCGCACC
GTCCTGGCGA GCGGACCCGC CAAGAAGGCT GGCGCCAAAA TTGGATCCCT CATTGTGAAG
GTGGGGAATG TGGAAACAAA AAATTTGACG CATTTTGAAA CGATTGACGA GCTCCGCCAA
AGTCAGCGGC CGCTGCAGCT GGTCCTTCGT GAAGTGAGCG AAGATGCGTT GCGTTTGGCG
CGTGAAGAAA TGGGACGGCT CATTCGTGGG TCGGGATTTG GCACTATAAT GGACGGAAAC
CGTGCTGCCG AGGATGGGGA GCAGGAGGTG GAGGTGGAAA TTTCTCGTCC GTTGATTGAA
GCCGATTTGC GCATCGATGC GTACACAAAC TTGATAAGAC GACGCATCGC AGAAGTTGCC
CCGCAAGCAC GCAACAAAAA GGAAGAAGCT CTTGCCCGAG TAGGAGAGAA AATGGTGTGG
CTCTTGACAC TCTTCGTAAT TGGCTTTGAG CGTGAGGCTG CAGGGCGTTA CGATATTACG
TCAGCCGAGA ACAACGAGCC GTCTCCTGTC CCACGACGGA GTTTGCATGG TGTGCATGCA
CACTCGGCGA AAGAGTATGG TGACGCAGCA AAAAGTGTAT CCAAGGTCCT CTTGGATTAT
TCGCAGAGGA AGCTGGACCC TCAACCAGTC GCGCAACGGA CTCGGTCGGC GGACTTTATC
CAACACAGCC TTGAGACCAC GGGAGGCAAT CGTAGAGGGC GAAAAATCCC ACCGTCTCCA
ATCCAACCAC AGCGAGGTAC GACGAGTGTA AGGGCAGTAC CAGGCGCTGC CCAACAAGAT
GGGAGCAGTT TGGGACATGA CAAGCCTCTC TTACAAATCG GGGACGTTCT GCAACGCACT
CGGACGTTTT TGACCGACAC AACTTCTCCA CCGGCTGCCC TTTTACGCGG AGAGCTTATT
GCTTTTTTAT GCGATGTTCT AGACATTGAT ACGGACATGG AGCTTTCGGA AGAAGATTCC
GTTTCTGCAA CTGCCGGTGC GCAAGCCGGT CCCATCAATG ATTTAGGTAG TGCCGGAAGT
TTGTTGAAAC TAATTATACT GAACTGTCCA ATCATGCGCA GTCCGGGTTG CGAAGCCGCC
TCATCTCACG AGGACGTTTT GGACCCTGAG TTTGAAGAAG AAATGCGTCG TCGCTTTGGT
CTGAAAGAGT ACCTATCGGC GGTCGATCGC CACAAGCTTC ATGCCGGAAA TCGTTTCCTC
GCGGTAGTCC ATCGTCTCGC CGCCAGTCGA AGCATGAGCG CAAGGATAAC TGCTTGTTCC
CTTGGCCCAG TCATCTGGGG ACATCTAGAT TTCCCGCATC AGCTACAGTT GCGCGGAGTT
GTTACCAGAG CACTACACGA TGTGGAAGTT ATTGTTCGGA AGGCCACGGC CACGGTTCTA
CACGAGGTTG CCGAGCTTGT CTTTGATTCA CGGTGTGTTC CATGGTTGGT TTTGATGTGC
GAACGAGCCA TGACGGATCC GGAACCACAG CTCCGGTCTG CTGCCATGAC TCTGACTTGG
CATTTGGCTG AGCATCTTCC GAACGCGTTC CTCGGAGACG CCAGTCAAGG GAGTGCATAT
CTTCGTCGGC TGCCAGACCG TAATGACCCT ATTTTTGCCG ATGTGTACTT ACTACAGTGC
AAGCTGCTTC CGGTTGCCAC TCGGCTAGCA GAAGATCGGT CACCATCGGT ACGCCTTGCA
GTTGCTGCAC AATGCGACAG GCTATGCTAT GCTCTCGGTG ACCACTGGTC TAGTGTCGTC
ATCGACGTCT TACTCGCTAT GCTGTCGGAT GCCGATGAAA GAGTCAGATG TGAAGCCGTC
TTGTGCGTTC CAAGACTTGC TGACATTGTT CTGCTCTCAA CGTCTCCTGG AGAAACTGCT
GTCAGCGAAG TGAGCATTTT GGAAGCTCTC TTACCAGCAG CAATAAAGCT TCAAAAGGAT
CCCAGTCCAT CGGTCAGAAT TTCTTTGGCA GCAGCTGCTG GCGATTTGTT GACATTGCTC
GTTGCTATGC AACGGAGATC GGACGAATCG TCAGGCTCAT CAGTCGAGTC ACCAGCACCG
AGTGATAAAT CCGTTGATAT CGAAGTTGGC AGAAAGTACA GGAGGCAGGT TGATGACAGA
TTGATTCCTC TCGTGCAACA ACTACTGAAC GATTCGGATC CTGAAGTAAC AAGCGCTGCG
CTAAGAGCGG TTACAAACGC GTCGCGCAAA TCAATTCCAC CTTCCTCCCC TAGAAATCGT
CAAATGTCCG TTGCATCGGA GGATGATTCT TTGTCTATAA CATCGTATCA ATCCCAAACC
AGCCGCGACA CGAGACAGCC AATGATTCTC CCAGTGCTGT CCGAAGTTCA AGTGCTTAGA
CTTTTACCAA CCTTGACTGA TTTGGCAAAC AGTAGACAAT GGCGAGTCAG ACAAAGCGCC
GTGGAAATTG TTCCGGCACT TCTCGGATGC ACACAAAAGT TGGAAACTCG ATCCGAAATC
TCAAAGCTTT GCGTTCGGCT TATGTCCGAT TCTGTTGATG CCGTCCGTAA AACTGCAGCA
GAATGCCTTT GTATGGGTGG TAGCAGTCTC GGTAGTCACG GCGAAGATGC TAGTGCCGAG
TGGGCGACGT CCATTGTTAT CCCAGCAATT CGGAGGTGTG CCATCCATTC GTTTTCAAAA
CAGAGGCTTC TCAGTCTTAA GATGATTGAA GTAGTTCTTC TTAATGGCGC TTGCCCAAGC
AAATGGAAAG GAAGCGAAAC AGACCAAGAA AGATTGACTG ACTCTCCGAT GCGAGAGCTC
GCGGCAATCG CTCTTTCGTT GACATCTGAC CGAATAGCAA ATGTTCGGTT GAATGTTGGC
AGGATATTAG AGGCTGTACT GCATGATTTT GAAGATGCCG AGCTGTCGTT TATTAGAGAA
GTGCTTTTGC AGCAAATGGA AGAGGAAAAG GAGAGAGAAG GAGGAGGAGA TCGCGATGTG
TTATTCTTCG CGAAGCGTTG CGTTGACCGA GCGTCTACCA TTATCGAAGA GACTTCTAGT
GCTACTTCAC TGGTATAACC GAGAGATACC GATAAACAAG GATTAAAGA
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| Protein sequence | MEAIDASGGL DGSMSTDNAL VVDARDVDTD THKATETVAS METSELDSDT FLDSTPSHLN
STNTSNSSTG VDFESSATTA LQEAVKVESE TNVEADDETV DAPSIQHIVS NETPTSDTEG
LDSSDITIVT NSTTETFTSI NRTDPTSPHP PDAITRETLL SHATTTSSST NEESSLRVET
SLDTATTPTN PMEVQTKQPQ KKAEDEEDDD VSSKAAVALA AVAAAATANH KSPAEAAKEA
RAAAQSFIKP ADHHHGHSVS SVKRTIQTVP LATVQTHLRA KALETGSVVA DKLCQGENDA
FLQYLLLLEY FRATVVHEDD DPDHLSIGSN HSQHELEQAA RAAEACDKVL TLLKKIDLAY
DSLVNMLPAE VERLQQPSFD EDSSDYDQDY ETPVVIPDLL PPCTFPGGDK TVAFFKACMG
TEGEAPAIAS DDTSLEEVRE QANSIDGNDS LDQPSTPTSK GNASLIPPAS PKHPIASNTN
VFSMFRRNTT PSKGILGSLR RRTGNASTTA RDTDSSLRVS ETTESTQAPS CRPGEYVVKI
EREMLGLTVE NVLERTVVRT VLASGPAKKA GAKIGSLIVK VGNVETKNLT HFETIDELRQ
SQRPLQLVLR EVSEDALRLA REEMGRLIRG SGFGTIMDGN RAAEDGEQEV EVEISRPLIE
ADLRIDAYTN LIRRRIAEVA PQARNKKEEA LARVGEKMVW LLTLFVIGFE REAAGRYDIT
SAENNEPSPV PRRSLHGVHA HSAKEYGDAA KSVSKVLLDY SQRKLDPQPV AQRTRSADFI
QHSLETTGGN RRGRKIPPSP IQPQRGTTSV RAVPGAAQQD GSSLGHDKPL LQIGDVLQRT
RTFLTDTTSP PAALLRGELI AFLCDVLDID TDMELSEEDS VSATAGAQAG PINDLGSAGS
LLKLIILNCP IMRSPGCEAA SSHEDVLDPE FEEEMRRRFG LKEYLSAVDR HKLHAGNRFL
AVVHRLAASR SMSARITACS LGPVIWGHLD FPHQLQLRGV VTRALHDVEV IVRKATATVL
HEVAELVFDS RCVPWLVLMC ERAMTDPEPQ LRSAAMTLTW HLAEHLPNAF LGDASQGSAY
LRRLPDRNDP IFADVYLLQC KLLPVATRLA EDRSPSVRLA VAAQCDRLCY ALGDHWSSVV
IDVLLAMLSD ADERVRCEAV LCVPRLADIV LLSTSPGETA VSEVSILEAL LPAAIKLQKD
PSPSVRISLA AAAGDLLTLL VAMQRRSDES SGSSVESPAP SDKSVDIEVG RKYRRQVDDR
LIPLVQQLLN DSDPEVTSAA LRAVTNASRK SIPPSSPRNR QMSVASEDDS LSITSYQSQT
SRDTRQPMIL PVLSEVQVLR LLPTLTDLAN SRQWRVRQSA VEIVPALLGC TQKLETRSEI
SKLCVRLMSD SVDAVRKTAA ECLCMGGSSL GSHGEDASAE WATSIVIPAI RRCAIHSFSK
QRLLSLKMIE VVLLNGACPS KWKGSETDQE RLTDSPMREL AAIALSLTSD RIANVRLNVG
RILEAVLHDF EDAELSFIRE VLLQQMEEEK EREGGGDRDV LFFAKRCVDR ASTIIEETSS
ATSLV
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