Gene PHATRDRAFT_48742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48742 
Symbol 
ID7195002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp122305 
End bp123219 
Gene Length915 bp 
Protein Length304 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183296 
Protein GI219126087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.526159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCATG TGGTTGATCC TTTAAAAGCC AACGTTGTGA AGGGTACAGG CTCAAGTGGA 
GGATTTGGCG GTAGAAAGGA AGGAGGGGAA AATTCCCAGC TAAAAGTGGA GGGTAAAGCT
CATGCCGACG TATTGAAAAC AGAGGGAGTA GTTCGTATCG ACAATGTTTT GTCGAAAGAG
ACCGCCGACG AACTCCGGAT ATTCTTGTAC GATCTCCGGT CTGAATCAGA AAAGTTGGTT
GAAAGTGGTG ACATTCAGCC CATCGAGCGA TTCGCCAACG TGTTGTTGAA GGAGAATCGC
TGCGATCTCA CGGTTCCGCT GGGATCCAAA ATCGTAGCCG ATTCTCTTTG CAGCGTTCTT
CAGCACAGCC CAGTGGGTCA CACAATTTCC AATTTGCTTG GGAAAGATGC AGTGCTTTAT
GAGCTAAGCT GCCTGATTTC GGATCCGGGA AGCCAACGCC AAGTGATGCA TCCCGATACC
CCGTATTTGA ACGATGATCC AGCTCTATAC ACATGCTTTA TCGCTTTGCA AGATATACAA
ATTGATATGG GGCCAACCAC ATGGCTACCA GGAACAAACT CCATGGTGGC ACACAAACAG
TTCAAAGACG AGGATTGTAG TTCTGGTGAA AGTGCCAAGG ACAAGCTGCT TCGAAGCACA
CCGGGTGTTC TGGGAACGTT GCCGAAAGGA TGTTGTGCTC TGTATGATTC ACGAACGCTA
CACTGTGGAG GCGCCAATGG CTCAAATCAA AGTCGGGCTC TTTTCTACTT TAGTTTTAAG
AACCCAAGTA TGGGATATCC TGGAAATCCT GGAAGCATAC GGCGAGAATA CATTTCTAAG
TTTAGGTTGG CGGACCTACA AAAAGAAATG AAAGCGTACG GCAGAGGCAG AAAGGACACT
GTTCTAACTT TGTAG
 
Protein sequence
MAHVVDPLKA NVVKGTGSSG GFGGRKEGGE NSQLKVEGKA HADVLKTEGV VRIDNVLSKE 
TADELRIFLY DLRSESEKLV ESGDIQPIER FANVLLKENR CDLTVPLGSK IVADSLCSVL
QHSPVGHTIS NLLGKDAVLY ELSCLISDPG SQRQVMHPDT PYLNDDPALY TCFIALQDIQ
IDMGPTTWLP GTNSMVAHKQ FKDEDCSSGE SAKDKLLRST PGVLGTLPKG CCALYDSRTL
HCGGANGSNQ SRALFYFSFK NPSMGYPGNP GSIRREYISK FRLADLQKEM KAYGRGRKDT
VLTL