Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48742 |
Symbol | |
ID | 7195002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | + |
Start bp | 122305 |
End bp | 123219 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183296 |
Protein GI | 219126087 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.526159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCATG TGGTTGATCC TTTAAAAGCC AACGTTGTGA AGGGTACAGG CTCAAGTGGA GGATTTGGCG GTAGAAAGGA AGGAGGGGAA AATTCCCAGC TAAAAGTGGA GGGTAAAGCT CATGCCGACG TATTGAAAAC AGAGGGAGTA GTTCGTATCG ACAATGTTTT GTCGAAAGAG ACCGCCGACG AACTCCGGAT ATTCTTGTAC GATCTCCGGT CTGAATCAGA AAAGTTGGTT GAAAGTGGTG ACATTCAGCC CATCGAGCGA TTCGCCAACG TGTTGTTGAA GGAGAATCGC TGCGATCTCA CGGTTCCGCT GGGATCCAAA ATCGTAGCCG ATTCTCTTTG CAGCGTTCTT CAGCACAGCC CAGTGGGTCA CACAATTTCC AATTTGCTTG GGAAAGATGC AGTGCTTTAT GAGCTAAGCT GCCTGATTTC GGATCCGGGA AGCCAACGCC AAGTGATGCA TCCCGATACC CCGTATTTGA ACGATGATCC AGCTCTATAC ACATGCTTTA TCGCTTTGCA AGATATACAA ATTGATATGG GGCCAACCAC ATGGCTACCA GGAACAAACT CCATGGTGGC ACACAAACAG TTCAAAGACG AGGATTGTAG TTCTGGTGAA AGTGCCAAGG ACAAGCTGCT TCGAAGCACA CCGGGTGTTC TGGGAACGTT GCCGAAAGGA TGTTGTGCTC TGTATGATTC ACGAACGCTA CACTGTGGAG GCGCCAATGG CTCAAATCAA AGTCGGGCTC TTTTCTACTT TAGTTTTAAG AACCCAAGTA TGGGATATCC TGGAAATCCT GGAAGCATAC GGCGAGAATA CATTTCTAAG TTTAGGTTGG CGGACCTACA AAAAGAAATG AAAGCGTACG GCAGAGGCAG AAAGGACACT GTTCTAACTT TGTAG
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Protein sequence | MAHVVDPLKA NVVKGTGSSG GFGGRKEGGE NSQLKVEGKA HADVLKTEGV VRIDNVLSKE TADELRIFLY DLRSESEKLV ESGDIQPIER FANVLLKENR CDLTVPLGSK IVADSLCSVL QHSPVGHTIS NLLGKDAVLY ELSCLISDPG SQRQVMHPDT PYLNDDPALY TCFIALQDIQ IDMGPTTWLP GTNSMVAHKQ FKDEDCSSGE SAKDKLLRST PGVLGTLPKG CCALYDSRTL HCGGANGSNQ SRALFYFSFK NPSMGYPGNP GSIRREYISK FRLADLQKEM KAYGRGRKDT VLTL
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