| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48689 |
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| Symbol | |
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| ID | 7194919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011686 |
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| Strand | + |
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| Start bp | 611804 |
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| End bp | 613483 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183127 |
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| Protein GI | 219125731 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000119699 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTGGC CAACGGTACG CAACGTCCAG AAACTCATCC TCCTTACTAT TCAAGTAGTG
AGCAGTTTTG TTCCGAGACC GACCGCTCGC TCCAGATTGC AGTGGACGAC TCGAGCGACT
GCCTCCTGCA GACTACTGTC GTCTACCGAA GGACCAAACA GAGATGACCT ACCAACTCCC
ATATACCACC ACATAGATCT ATACAACGAA AACTCGTATA CCGACGACGT TGAGACAGTC
TTGGGGCGTG TCGATGGGTT TATGAGACTG CTTGAGCAGC AGGAAGCCTG GCCACTTCTA
CACGAGAGTA AAATCCGTGA TAGAATTCAT AGCCAGCATA CACGAGATTG CGAGGCAGCG
TCTCTTAACT TGGCGCCCGA ATCGCCAGTC CTGCGCGACC AGCAATGCAG TACTCGGTAC
GAATGGATTT TTTCTGGCAC CAAATCCTAC CCGTTAGCGG CGCAATCGTT AGAGCCAATA
TTGAATACAA CGGCTATTTC TACAATTCGC GAAGCCGCAG AAGCGCATTG GGAAAATCCG
GCTTTCTGTA CATCCCGGTT CACCTATCAG CGCCCAGGAA ACTATGAAGC CCACGTAACG
GACTTGGGCG AGCGAGTTCG CTCGATTGTC AACGAAACAT TGACAACTAG AATTTACCCA
CTAATTCGCG ACGTGTTTTG GAATGACCCA ACCTGTTCGT TGGCTCCAGT TGATCAACTT
TGTGTGTACG ACGCTCTCTA CATACGCTAT AATTCCACAC AAGCCAAGCT ACTGGATCAC
ATTGGTGCCG GGCAACCTTT GCACCGTGAC TTGGGACTCA TTAGTATCAA TATTCGACTG
AACAACGATT TTGAAGGTGG TGGCACCTTT TTTGAAAATC AGCTCCTCGA CCGAAAGGAG
TCCGATCTCG AACCAGGAAT AACACCTCTG ACACCTCTCG AGCGCGGCCA CGTCCTATTG
CACAAATCAT CGGAACGACA TGCTGGTGCC AGCACCGTAG ATGGAGTGCG AGACATTCTC
GTCTTTTTTG TATCAGGAGT CTCCTGCGAG ACAGGCTCCG GCAGTGGCTC GACAGTACCG
ATGCCAATTC AATCCGCTAT TGCGAAACAG TCTCGTGGAT ACTGCGACGA CTGCTATTCG
AATAATCCAC TACGGGCTAT CTTTTGTCGC ATCGCACATC AACGCTACGC GGTTCGGGTT
GCGCCTTCGG ATGGGGAAGC TTGGCAGTAC TTGGGTACTG CCTTCATGGA GTACGATACC
TACCTGGCAG TAATGAAGGC TTCCGCCGGG CTTCGAGGGG CCGTACTCCA GACGGCGACA
CGATGTCTAC AGCTCGCCAC GAGACTGACG CCGTGCGATT CGCGTGTCTG GAACAACCTG
GCTCTCACGC TGAACCGGCA ATGGAAATTG AAAAGCGACG CGAGTTTGCT TAATACCACG
GAAATGGCTT TTGCGACGGC TCACCAACTT CTGAAAATGT CTCGAGAAAA GTGCGATGTT
GAGGGCGAAT TGGACAATGT GAATGTAAAC TATGGACTAT TTCTTTCCAA TCAAGACAGG
TTTATGGAGG CGGGGTGTAT TTTGGAAGGC ACTGCACTGA AGAAGATCAT AGATCAAGAT
TGCGGAAAAG CGGTTGAAGA TGCCTATGAA TTGTGGAAGT TTTGTAGACA ACAGCAATAA
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| Protein sequence | MSWPTVRNVQ KLILLTIQVV SSFVPRPTAR SRLQWTTRAT ASCRLLSSTE GPNRDDLPTP
IYHHIDLYNE NSYTDDVETV LGRVDGFMRL LEQQEAWPLL HESKIRDRIH SQHTRDCEAA
SLNLAPESPV LRDQQCSTRY EWIFSGTKSY PLAAQSLEPI LNTTAISTIR EAAEAHWENP
AFCTSRFTYQ RPGNYEAHVT DLGERVRSIV NETLTTRIYP LIRDVFWNDP TCSLAPVDQL
CVYDALYIRY NSTQAKLLDH IGAGQPLHRD LGLISINIRL NNDFEGGGTF FENQLLDRKE
SDLEPGITPL TPLERGHVLL HKSSERHAGA STVDGVRDIL VFFVSGVSCE TGSGSGSTVP
MPIQSAIAKQ SRGYCDDCYS NNPLRAIFCR IAHQRYAVRV APSDGEAWQY LGTAFMEYDT
YLAVMKASAG LRGAVLQTAT RCLQLATRLT PCDSRVWNNL ALTLNRQWKL KSDASLLNTT
EMAFATAHQL LKMSREKCDV EGELDNVNVN YGLFLSNQDR FMEAGCILEG TALKKIIDQD
CGKAVEDAYE LWKFCRQQQ
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