| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48564 |
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| Symbol | |
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| ID | 7194730 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011686 |
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| Strand | - |
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| Start bp | 223038 |
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| End bp | 225297 |
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| Gene Length | 2260 bp |
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| Protein Length | 671 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183182 |
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| Protein GI | 219125845 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.304178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGGG CAGCTGCTAC TGATTGTGAA GCTGGCGATG CGGAAAGGAC CTTCGGACAC
GGCAACGACA TCATTCCTGT CGATATCGTT GATTCGACGG AACCGCAGCT TGCACATTCG
TTGGAAACGC CCAAGGTAGC TGACGATGCG GATACGCCGA CGCCAGCACT CGATGAAGAT
ACCACAATTC GGTATTCCTT CAGGGTGAGC GTTCACAAGT CTGACCTCTC GCATAGGTAC
GATCAGTCGC GGTCAGCGCC AGAGGTCACA GGATTAAATC GTGAGTTCGC AGTACGTACA
GTCTCACACA AATCCATCGC TTCTCATGTC TTCAGCAGTG GCATGAAGCA ATGGTTATGG
CCTTTAGGGG TTACGAAGCA GGCCATTCCA ATGTTCTTAT GCTTGATTGC TTTGACGCTA
ACTGGGGCAG GGAGCTGGGA TTGCTCCTTT TTTCAAGGGG CGCAAATATC GTTTACCGGA
AGTAACTACG GATTGTGGAC GCTGCGGGAT ATTTCTGGTA CGTTAATCTC ATAGTTCATG
CGACGCGCAT TTCTGTTTCT TTCCATAATA CTAACTGTAT GTAATCACCG TTCCTCTCCA
TCGAATCGAA GGCAAGTGCC AACGATGGGA TGTACTCTTT TTCAGCTACA ATCTCGGCGG
TCCTTTGATA GCTGGACGCA TTTTCAGTAT GGCTAGTATG TTATTGGGTT TGTCACTCTT
GACTACAATG GCGCAAGCTC TGCAATTTTA TGCGGTCAGC TGGGGAATCG GGATCATTTT
GCTTCTACTG TCACTCGTGA GTATTTTTAC AACCAGTATT TACAATGTCT GGGCGGTCTT
TTGGCTTTTC ACATACATTA TTTTCATTCT AGCGGCGCGA GCATTGTTCA TCCATCCGAT
CCAACGCAGG ATTTCACAAC GCGGATGCAA GATTGTGGCT GGTTTGTTTG CTCTGTGCAG
CGTCTGTACG ATGCTCACAC TCATCGTTTT AAAAAGTGAT TTCTGCACCT GTGACAACAT
TACGTCGGAA GCGCTCAAAG GCCGCAGCCC TGGCGACAAT GCCTGCGACA AGGAGTGCGA
GATCGGCTCG GCCGGAATTC TGATGATTCT GGCCGCCTTT GTTTGGGCCG CCACGGCAGT
TGCCGTTTTG CGGTACGGCG TCCAACCCGA CGATTTGGAG AGCATTATTG AACGGACCAC
CGACCATACC ATATATGGAT ATTATCCAAG AAACTCCATT ACATCCCGTC TGTTCGGTTA
TCAAACTACT TTCACGGGTA CGGTCGCTAA AGCGAGTGCT CCGCTTGTCA AAATGGCGAC
TCGACGATCG CCGGGTCCTA GCAAGGGCGA AGGGTCCGCG CGCGATGAGG CTACCGCACA
AGAGGTGGCG GGTGAAGGAG ATGACGCAAT TGAGTTGATG GAAGCATCCA AACGAATGCT
CATCAAAAAA GAGAATGAAG AGATCGAGGA CAAACGAGGG TACTGTAAGA GAGGTTGCTG
CGATTATAGG GTCCGCGATC GCACTCGCAG GGAACGTTGG GCGTTTTGGA CTTTCCGAGT
GGTCCTTGGC TTTCTGATTG GAATCTACGT TTTCTTAGTA GCCATCATGG TTGGTTCTCG
AGGTGAAAGT ACCACAGCCG CTAAGGCTCC CGACACAAGC TTCAATTTTA TCACGGACAT
CGTCTGTGCT TTTGATCCTC TCGACTTGAG CCAGCCCTTC CAAACTTTCC CAAATAAGGC
CGATGCCAAT TCGGCCGGGT ACCAAGTCGC ACACTGCGGG GCCTGCGCAT TTTGCTCCAA
CCCTGCAGAT ATAGAAACCT ACGTTGAAAC CCGCAAGACC ATTGCCAAAC AAGCCAAGAA
GTGTGGGAAG ATCTCAATGC TGGGAAGTTA TGAGGAGTTG GTGGCGTGCC TTGATGACAA
AATTGGATTC ACAGAAGATT GTACCAAATG CTGGGCAGAC AATATGATCA GTACTGGCAA
GCAGTGCCTT TTTACTTGCA TGGTTACTAT GTTTACGGGC TTCATGAGTA ACAATAATGT
ACCAGGAGCT GGTGACCAAG GCTGGCTCAA TCAATGTCTC TTCTGCGACG AGAAACTGAG
CGGCCCAGCT TTTGTGACGT GCTCAGGGGT CGCGAGACGT CGACTCGGTA TCGTTAGCGA
AATTGAACGC AATCCAGACG AACAATGCCA ACAGACGGAC GTTGACTGGG TCAGCGTGGA
TTTCGATACC CTTTTCGGAG ACTACGGACT TGTGCCATGA
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| Protein sequence | MKRAAATDCE AGDAERTFGH GNDIIPVDIV DSTEPQLAHS LETPKVADDA DTPTPALDED
TTIRYSFRVS VHKSDLSHRY DQSRSAPEVT GLNRSWDCSF FQGAQISFTG SNYGLWTLRD
ISGKCQRWDV LFFSYNLGGP LIAGRIFSMA SMLLGLSLLT TMAQALQFYA VSWGIGIILL
LLSLVSIFTT SIYNVWAVFW LFTYIIFILA ARALFIHPIQ RRISQRGCKI VAGLFALCSV
CTMLTLIVLK SDFCTCDNIT SEALKGRSPG DNACDKECEI GSAGILMILA AFVWAATAVA
VLRYGVQPDD LESIIERTTD HTIYGYYPRN SITSRLFGYQ TTFTGTVAKA SAPLVKMATR
RSPGPSKGEG SARDEATAQE VAGEGDDAIE LMEASKRMLI KKENEEIEDK RGYCKRGCCD
YRVRDRTRRE RWAFWTFRVV LGFLIGIYVF LVAIMVGSRG ESTTAAKAPD TSFNFITDIV
CAFDPLDLSQ PFQTFPNKAD ANSAGYQVAH CGACAFCSNP ADIETYVETR KTIAKQAKKC
GKISMLGSYE ELVACLDDKI GFTEDCTKCW ADNMISTGKQ CLFTCMVTMF TGFMSNNNVP
GAGDQGWLNQ CLFCDEKLSG PAFVTCSGVA RRRLGIVSEI ERNPDEQCQQ TDVDWVSVDF
DTLFGDYGLV P
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