| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48554 |
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| Symbol | |
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| ID | 7194723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011686 |
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| Strand | - |
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| Start bp | 199459 |
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| End bp | 201128 |
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| Gene Length | 1670 bp |
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| Protein Length | 356 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | DNA-binding transcription factor |
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| Protein accession | XP_002183175 |
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| Protein GI | 219125831 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.911244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGCTGTTTTC GTAAAACGAA GTGCCTCCAT GTCCTCATCC CACAAAAGTG TTTTGCGGTT
CGCGTCGGGT TTCATAAAAG GTTGATCGCA AGGTTTCTTG TCGCCAATTG TAGCTCCATA
AAGAAATCGC CGACCAGAAG GAACCAGTCT CAAGACGTTG CCTCACGATC GACCATGATC
AGCAACAGCA ACAGCAACGG TACAAAATCA CACTCTATTC TATCGAAACC CCTCAGCACG
TTGTTGAAGC AGATGAGCGA AGAGCCAGAT TTTCTTCGAA TATTCGAAGA CGAAGATTTC
GGGGGAATGT TGCAGCAGTC CATAGAGCAC ATAGGGACGT TTTCAAGAGA TGTCCCATCC
GTTCCCAAAG TTACAGGAAC GAATATGGAG AGATCAATCA AGACTGTCAC TTCTGGCCGA
TCTTGCTCTG CTTCCACTTG CTGTGAATTT GTGAACGTCG TTTTGATAGT CAATCCAATC
ACACGCCAAG TATGTTGTCC ACAACAAACA CTAATCCACA ATTCACAAAA GGCTGTGATA
GGGCCAGCTG TCTTGGACGG CTTTCCGATC GACACAATCG ATGGGCTATC ACAGGAGTTC
CAACGAATTG GACCGGACGG ACAAGATAGA GCCCCTGGTT GTGCAACGTC AGAAACGGGT
GGTTCTCAAG AAATCCCTTT GCAAACGCCT TCGCCCGTTA CGCAGTCGCA ATACCATGTA
AAGCATCCTT CGCCTTGCAT ATTGCACTCG AAGAAATCGA GAGTCTCTCA AACGCTTTCC
CTGGCAAAAT TCGACGAATG CGTTTCAAGT GGTACCCGAT CGCTTTCTCC GTTGCATATC
GATCACATAA CTATACAGAG TGCTTCCTCC GTCAACGCTG CACCACTACG AGCCTTGTCC
GCCTACAATT TTTTCTTTCG TGACGAGCGC CACCGACTTT TACATGGCGG CGACCATGAT
TGGAGCAACC AGAAACGTCA AGCTCTACTC AATTTGCACT GGCATCGAGA TCGGGCGAAA
AAACGAAAGC ATCGTAGAAC GCACGGCAAA ATCGATTTTA CAACTCTCTC TAAGTGTATC
TCGCAACGAT GGAGGGATCT TTCGGAAGAA AGTAAGGACT TTTACCGAGA CATAGCGACA
GCCGACTGGC AACGCTACCA ACAACAAGTC AACCACATCG CGAGCTTTCG CATGCAAAAC
GATGACTCTT TTCTGCCTGC TGATTTTTCG AGTGTAGTGG GATGAGGAAT TCAAGAAACT
GTACGCGAAG CAGAAGCCCC TGTACCAGAA AGCCGAGAGC CCAAGAGTTT TCGCTTATGT
TTATGTTTCA ATTTTTAAGA ACATCACAAC GATCAATGTC TTGCCTCCGC ATTAGAATAA
CCTACCTTGC TCCGGAAAGA AAAGCAAATC GAAAGGTTTG TACGACCGGT ACAACGGTTG
TCGCTGGGTC GCTATGAGGA ATAAACAACC CCAAACCAGG GAAAGGTAGA ACTACCACCT
GTAAGATTGG CTTACTGTTC GTTTCTACAT TACAGCCTCG CAAGTTACGA GAATACTTAG
TGGCACAAAT GTTTTTATTT ACTTGAATTG TTTGAACGAG GCGAAAGTCT TTCTATATGT
TAGGCATCGT TCATTTGGTT GCCTGGATTC AACTACTCGT TTCTTTGAGG
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| Protein sequence | MISNSNSNGT KSHSILSKPL STLLKQMSEE PDFLRIFEDE DFGGMLQQSI EHIGTFSRDV
PSVPKVTGTN MERSIKTVTS GRSCSASTCC EFVNVVLIVN PITRQVCCPQ QTLIHNSQKA
VIGPAVLDGF PIDTIDGLSQ EFQRIGPDGQ DRAPGCATSE TGGSQEIPLQ TPSPVTQSQY
HVKHPSPCIL HSKKSRVSQT LSLAKFDECV SSGTRSLSPL HIDHITIQSA SSVNAAPLRA
LSAYNFFFRD ERHRLLHGGD HDWSNQKRQA LLNLHWHRDR AKKRKHRRTH GKIDFTTLSK
CISQRWRDLS EESKDFYRDI ATADWQRYQQ QVNHIASFRM QNDDSFLPAD FSSVVG
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