Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48552 |
Symbol | |
ID | 7194720 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | - |
Start bp | 190430 |
End bp | 192834 |
Gene Length | 2405 bp |
Protein Length | 781 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183172 |
Protein GI | 219125824 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGA ACGAAAAGAT TGAGCAAATT CGCAACCGCA GGTTGCGAAT CTTGGCCAGC CTTGCTTTGG GTTGTTGCCT CGTTGGGGCC GTGTTTGTTT CCTTCCAGGG AAGCGACTTC TTCTCCGACA AGCCACCGTC CTCGTCAAAG CCGTCGCTCG CGAAGGCTTC TGATGTAGCG GGGCCTTCAG AGTCACAGTT GGTGGCACAA GTGAAAGAGC TGGACCAAAA AGTCCGTGAC ATTAAAAAGA CTGGCGTTTT CCTAGAGGTC GACCCGAAAG GTCTCGAAGC GAGTCGTCAA CTCCAAGACG CCACTCGACA CCTTTTGGCA CGCCGATACG GTAGCAAAGA ACCCTACCGA GTCCGTGTGG ACTTGAAATT CCAAGAATCA AATCCCACGT ATGAGGCCAA TGGCGAAGAT GGGTCATTTA CAATCGAACT GGCGCCGTCT CGTTTGGTAC CGCACTCCAT TTTTAGTTTT CTGGAAATCG CACGACACTG GGATGATCAC AAAGGCGCCT TTCACCGCCG CGCCAATCAC GTGCTGCAAG TCACCGTAAA AGGTAACCAA GTCCCGCACC TAGCCTTTCA GGAGTATAGC GACCTCTTCC CACACGTCAA GGGAACAGTG GGCTATGCTG GAAGACCAAG TGGACCGGCT TGGTACGTGT CTATTATGAA TAATTCCAAC AATCACGGGC CCGGGAGTCA GCAGGCCGCG AATCCGCACG AAGCAGATTC CTGCTTTGGA AAAGTCGTGG AAGGCTTTGA TGATGTGGTG CTGAAACGAA TAACTAAAAT GCCTGGAACG GGATTTTTGG ATAAGGACAA GCACGTCTTC ATTGATAAGA TGACCATTCT CGTATTGGAC GACACAGGAA AATATGTACC ATGGAAACAA TCTGGAACTC TGGTTCAGTA GATATAGTGC ACAAGGAAAC TTTGCTTAAA ACAACTTTGT TTCTCACGCT CAGTAGCAGT GACCCACATG CAGTTTACGC TTACATTAAG CCTATATCAC TCATTGGAAA CGATTCCTTG TGCCACGAGG CGAGTATCGA TTCAAATGCT ACCATTATTC TTATCATTCG TTATTACAAT GTGTTATTCA AAGTCAGAGA AAAAACAGGA CACAAAGGTC GGATATTCGA GCGCGCCAAA AAAACTACCA AAAGCACGGG GCGGCGCCGG CGTCCAAAAT CGAAACGTGG GCTGAAATTT CAATCGACAT GTGTGTTTGA CTTGATGACA GTGAAGCGCT GTTTGGCCTT ACCGAGAGAC GTCTTTTTGG CAGGTGCCTT CATAATGAAG TCGGCTAACA TCCTGACACG ATTGCTGCTG GTGTGGCTAC AATTCACAGC GTCTTCGGGA GCATTTGCTC CGGCCCGTTT GGGCTCAACT CGAACGCATC GTGGTTCCTC ATGCAATTCG TCGTCTCCGC CTTTGGTAAA GTCAGGAGGA AATTGGCCAA ATTTCCTAGC GTCTTTCCAT CAAACGGACA GTAACGCGAA AAACAACGTC GTGAATCAGC TGGTGTACCA ACTCGCGCAA GAGTCCCCCA ATGCGACCTA TATCAATGAA TGTATTCCGC AGCTAGAAGA GCTTGGGAAA GCTACTGTTG GTGTGGACGA GAATGACTCC AGTCGCTTTG AACGCGTGAT AGGTCTCTAC AACGTCAGCT TTGTCCAAAC GCGACAAAAG GACGAAAATC CGGTAGGAGG GCGTTGGACA CGGTCGTCCG GATTCGCCCA AAAGATCCTC CGTACTCGCC GCACTCTGCA GCATGTACTT CCAGCGAACG ACACCGGTTG TGCACGGGCA TTGATGTTCC AAAATCGTAA AGTCGTTGCT GAAGCTATCA ACGTGATTGT GCTGGAAGCC TTTAATGGTT GGATACGCAC GACAATTTTG CTTCGTGGAG ATTGCGTTCC GTTGAACACA ACGGAGCGGA TACAAGGCAC GTGCCAGCCG CTCTCTCCGT TGGCGGTTCG AGTTTGGTTC GACGCACCTC GAATCATCAT CGGGCGAACA GGACGGTTTT TCAATCTGAA TGTTGGACCG CAAAGCAGTG TTGTCTTGGA TACTCCCTTC GTAGACGAAC GTGTCCGCTT AGGTCTAGGA GGACGGTCGG GTACGCGCTT TGTATTTGCC AGATGCGACA CTCAAGATAC GGAAGCGACA GCCTTTCGAA CGTTACTGCA GAGAAAGCCA TGGAGCAAGG TCAAGACATT ATCTGTTTTG GTCGGTATAT GCGGGGTGGG AATCTACAGT GCGATTGGCC GCGCAGAAAA GCCGATCTTA GGAGGCGCAA TATCTGTATT CTCCGCTTTG TTTGCAATGT TGATTGCCTT TTCGAGTGGA GGTATAGAGC AGGAGAATAT ATCCGCCAAG CAAGCTTTAG AGTAG
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Protein sequence | MEKNEKIEQI RNRRLRILAS LALGCCLVGA VFVSFQGSDF FSDKPPSSSK PSLAKASDVA GPSESQLVAQ VKELDQKVRD IKKTGVFLEV DPKGLEASRQ LQDATRHLLA RRYGSKEPYR VRVDLKFQES NPTYEANGED GSFTIELAPS RLVPHSIFSF LEIARHWDDH KGAFHRRANH VLQVTVKGNQ VPHLAFQEYS DLFPHVKGTV GYAGRPSGPA WYVSIMNNSN NHGPGSQQAA NPHEADSCFG KVVEGFDDVV LKRITKMPGT GFLDKDKHVF IDKMTILVLD DTGKYVPWKQ SGTLVHSDPH AVYAYIKPIS LIGNDSLCHE ASIDSNATII LIIRYYNVLF KVREKTGHKG RIFERAKKTT KSTGRRRRPK SKRGLKFQST CVFDLMTVKR CLALPRDVFL AGAFIMKSAN ILTRLLLVWL QFTASSGAFA PARLGSTRTH RGSSCNSSSP PLVKSGGNWP NFLASFHQTD SNAKNNVVNQ LVYQLAQESP NATYINECIP QLEELGKATV GVDENDSSRF ERVIGLYNVS FVQTRQKDEN PVGGRWTRSS GFAQKILRTR RTLQHVLPAN DTGCARALMF QNRKVVAEAI NVIVLEAFNG WIRTTILLRG DCVPLNTTER IQGTCQPLSP LAVRVWFDAP RIIIGRTGRF FNLNVGPQSS VVLDTPFVDE RVRLGLGGRS GTRFVFARCD TQDTEATAFR TLLQRKPWSK VKTLSVLVGI CGVGIYSAIG RAEKPILGGA ISVFSALFAM LIAFSSGGIE QENISAKQAL E
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