| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48552 |
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| Symbol | |
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| ID | 7194720 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011686 |
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| Strand | - |
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| Start bp | 190430 |
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| End bp | 192834 |
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| Gene Length | 2405 bp |
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| Protein Length | 781 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183172 |
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| Protein GI | 219125824 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGA ACGAAAAGAT TGAGCAAATT CGCAACCGCA GGTTGCGAAT CTTGGCCAGC
CTTGCTTTGG GTTGTTGCCT CGTTGGGGCC GTGTTTGTTT CCTTCCAGGG AAGCGACTTC
TTCTCCGACA AGCCACCGTC CTCGTCAAAG CCGTCGCTCG CGAAGGCTTC TGATGTAGCG
GGGCCTTCAG AGTCACAGTT GGTGGCACAA GTGAAAGAGC TGGACCAAAA AGTCCGTGAC
ATTAAAAAGA CTGGCGTTTT CCTAGAGGTC GACCCGAAAG GTCTCGAAGC GAGTCGTCAA
CTCCAAGACG CCACTCGACA CCTTTTGGCA CGCCGATACG GTAGCAAAGA ACCCTACCGA
GTCCGTGTGG ACTTGAAATT CCAAGAATCA AATCCCACGT ATGAGGCCAA TGGCGAAGAT
GGGTCATTTA CAATCGAACT GGCGCCGTCT CGTTTGGTAC CGCACTCCAT TTTTAGTTTT
CTGGAAATCG CACGACACTG GGATGATCAC AAAGGCGCCT TTCACCGCCG CGCCAATCAC
GTGCTGCAAG TCACCGTAAA AGGTAACCAA GTCCCGCACC TAGCCTTTCA GGAGTATAGC
GACCTCTTCC CACACGTCAA GGGAACAGTG GGCTATGCTG GAAGACCAAG TGGACCGGCT
TGGTACGTGT CTATTATGAA TAATTCCAAC AATCACGGGC CCGGGAGTCA GCAGGCCGCG
AATCCGCACG AAGCAGATTC CTGCTTTGGA AAAGTCGTGG AAGGCTTTGA TGATGTGGTG
CTGAAACGAA TAACTAAAAT GCCTGGAACG GGATTTTTGG ATAAGGACAA GCACGTCTTC
ATTGATAAGA TGACCATTCT CGTATTGGAC GACACAGGAA AATATGTACC ATGGAAACAA
TCTGGAACTC TGGTTCAGTA GATATAGTGC ACAAGGAAAC TTTGCTTAAA ACAACTTTGT
TTCTCACGCT CAGTAGCAGT GACCCACATG CAGTTTACGC TTACATTAAG CCTATATCAC
TCATTGGAAA CGATTCCTTG TGCCACGAGG CGAGTATCGA TTCAAATGCT ACCATTATTC
TTATCATTCG TTATTACAAT GTGTTATTCA AAGTCAGAGA AAAAACAGGA CACAAAGGTC
GGATATTCGA GCGCGCCAAA AAAACTACCA AAAGCACGGG GCGGCGCCGG CGTCCAAAAT
CGAAACGTGG GCTGAAATTT CAATCGACAT GTGTGTTTGA CTTGATGACA GTGAAGCGCT
GTTTGGCCTT ACCGAGAGAC GTCTTTTTGG CAGGTGCCTT CATAATGAAG TCGGCTAACA
TCCTGACACG ATTGCTGCTG GTGTGGCTAC AATTCACAGC GTCTTCGGGA GCATTTGCTC
CGGCCCGTTT GGGCTCAACT CGAACGCATC GTGGTTCCTC ATGCAATTCG TCGTCTCCGC
CTTTGGTAAA GTCAGGAGGA AATTGGCCAA ATTTCCTAGC GTCTTTCCAT CAAACGGACA
GTAACGCGAA AAACAACGTC GTGAATCAGC TGGTGTACCA ACTCGCGCAA GAGTCCCCCA
ATGCGACCTA TATCAATGAA TGTATTCCGC AGCTAGAAGA GCTTGGGAAA GCTACTGTTG
GTGTGGACGA GAATGACTCC AGTCGCTTTG AACGCGTGAT AGGTCTCTAC AACGTCAGCT
TTGTCCAAAC GCGACAAAAG GACGAAAATC CGGTAGGAGG GCGTTGGACA CGGTCGTCCG
GATTCGCCCA AAAGATCCTC CGTACTCGCC GCACTCTGCA GCATGTACTT CCAGCGAACG
ACACCGGTTG TGCACGGGCA TTGATGTTCC AAAATCGTAA AGTCGTTGCT GAAGCTATCA
ACGTGATTGT GCTGGAAGCC TTTAATGGTT GGATACGCAC GACAATTTTG CTTCGTGGAG
ATTGCGTTCC GTTGAACACA ACGGAGCGGA TACAAGGCAC GTGCCAGCCG CTCTCTCCGT
TGGCGGTTCG AGTTTGGTTC GACGCACCTC GAATCATCAT CGGGCGAACA GGACGGTTTT
TCAATCTGAA TGTTGGACCG CAAAGCAGTG TTGTCTTGGA TACTCCCTTC GTAGACGAAC
GTGTCCGCTT AGGTCTAGGA GGACGGTCGG GTACGCGCTT TGTATTTGCC AGATGCGACA
CTCAAGATAC GGAAGCGACA GCCTTTCGAA CGTTACTGCA GAGAAAGCCA TGGAGCAAGG
TCAAGACATT ATCTGTTTTG GTCGGTATAT GCGGGGTGGG AATCTACAGT GCGATTGGCC
GCGCAGAAAA GCCGATCTTA GGAGGCGCAA TATCTGTATT CTCCGCTTTG TTTGCAATGT
TGATTGCCTT TTCGAGTGGA GGTATAGAGC AGGAGAATAT ATCCGCCAAG CAAGCTTTAG
AGTAG
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| Protein sequence | MEKNEKIEQI RNRRLRILAS LALGCCLVGA VFVSFQGSDF FSDKPPSSSK PSLAKASDVA
GPSESQLVAQ VKELDQKVRD IKKTGVFLEV DPKGLEASRQ LQDATRHLLA RRYGSKEPYR
VRVDLKFQES NPTYEANGED GSFTIELAPS RLVPHSIFSF LEIARHWDDH KGAFHRRANH
VLQVTVKGNQ VPHLAFQEYS DLFPHVKGTV GYAGRPSGPA WYVSIMNNSN NHGPGSQQAA
NPHEADSCFG KVVEGFDDVV LKRITKMPGT GFLDKDKHVF IDKMTILVLD DTGKYVPWKQ
SGTLVHSDPH AVYAYIKPIS LIGNDSLCHE ASIDSNATII LIIRYYNVLF KVREKTGHKG
RIFERAKKTT KSTGRRRRPK SKRGLKFQST CVFDLMTVKR CLALPRDVFL AGAFIMKSAN
ILTRLLLVWL QFTASSGAFA PARLGSTRTH RGSSCNSSSP PLVKSGGNWP NFLASFHQTD
SNAKNNVVNQ LVYQLAQESP NATYINECIP QLEELGKATV GVDENDSSRF ERVIGLYNVS
FVQTRQKDEN PVGGRWTRSS GFAQKILRTR RTLQHVLPAN DTGCARALMF QNRKVVAEAI
NVIVLEAFNG WIRTTILLRG DCVPLNTTER IQGTCQPLSP LAVRVWFDAP RIIIGRTGRF
FNLNVGPQSS VVLDTPFVDE RVRLGLGGRS GTRFVFARCD TQDTEATAFR TLLQRKPWSK
VKTLSVLVGI CGVGIYSAIG RAEKPILGGA ISVFSALFAM LIAFSSGGIE QENISAKQAL
E
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