| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48454 |
|---|
| Symbol | |
|---|
| ID | 7203687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011685 |
|---|
| Strand | - |
|---|
| Start bp | 534873 |
|---|
| End bp | 536308 |
|---|
| Gene Length | 1436 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182979 |
|---|
| Protein GI | 219125418 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTTT CAGTTGCCTG CAAAAAACTT CATAGCGCCA CGACAGCGAC ACACTTTTTC
GCGTCGAAAG CAGGACAGAG CTTATTGTGC GTATCGGCGG CTTTCGACGA TCCGGCCCGC
TACCAGACTA TACCGGACCG GCCAGTTGCC AGCTACCGAG CTCATCGAGA CTCGTGTGGA
CAAGATGCAG GCGACGCATG TGACAAAAAG CGAACTCGAA GAGAGGAACG GGACGACCCC
TGGTCCTTGC GATGTCCTAC TTGGACGCGG AAGGAGAGTA CAAGCCCACG CAGGAAATCA
AGCGTTCCGG AAGATCCTCG AAGGACATAT GCTCCAGCAC AGAAGCTCTC CCCGAAAAGA
TAGGGTTGCC TTACTCTTGG AGATCCTCAC AGCTGTCAAA CTCAACGGAG GTCGCTTCTT
GCAGAGAAAC GGGAACGCGG GTCAGTGGGT CGAAGTTGAC AATTCAATAG CTCACAAGAA
GGTAGGCCAA GCCCTGCGGT ATCGACAAAA GCAAGCAACG TTGGCTCAGT CGCTACTTAC
CGATACGAAG GGAAGAACTG AGACTTCAAG CGCACCCCTC CTTTCCGATG AAGAAATATT
ACAGGCCATT GGTGAAGACC TATCCGCTTT AAACGTGTGT TCCCTTCCGT CAATGATAGA
AATCGACGGT CTCCATGGAA TTAATTGGAC TCCTACCGAC AGGGCACCAG GATTTTTCAG
TGGAGACGAC ATTCAAAATG CAGAAGCCTT TCCATCAGGC TTGCTCTACC AAGATGACGA
AAGCGTCTTT GATACAGAGA GTCTCGAAGA AATCGGAAAG GATTGGGAAT GAAGGCGTAG
CGAGCATGCA ATGCGCGCGT GGAAGGTACC ATATTTCCCT TATTGACGAG AAAATGCAAC
TGCAATTCAC TTTGTAATGT TCGAGCTTGA GATAGAGGAC AAGCCAGGTC GCCCCATCAC
CTCTCGACGT GACTCAACTA GACACTCCGG AAGCTTGGAA TCGACTCCAC CGTTAGAAAC
AGCCCTGTCT GCTCATATTC GTGTCGCTGC TGTCGGTCAG TTGGCGGTAT TGTCCCCGGC
CTGAGAAGGC CGGGGTCTAA GAAAAAGAGA GCACACTATA TGCATCGCTT TTCCAGTCAA
TGGTAGAACA AAGAAATCAG CAACTCCGAT ACATTGTGAA GTAAGAAGTC GTGACATCTA
TTGCTGCGTC ATCAACGTTC AGAGAGAAGC GCAAAGATCT CTTTTATAAG CATGCCGTCA
TGGCCATTCC CGATTGACAA CTCCAGTTCG TAGACACTCA CGGTCCAGGA GGAGTTGACT
CACTAACAAG CGGTAAAGAA AGCCGTGAAA CATTGAGGAT GACTTGTCCC CTCGTTTTCA
ACCTTTCCAG AGAATCAGGA AAGTTCGATC GGTGTTCTTC GTTTAGCGAA CCTTGT
|
|---|
| Protein sequence | MRFSVACKKL HSATTATHFF ASKAGQSLLC VSAAFDDPAR YQTIPDRPTR VDKMQATHVT
KSELEERNGT TPGPCDVLLG RGRRVQAHAG NQAFRKILEG HMLQHRSSPR KDRVALLLEI
LTAVKLNGGR FLQRNGNAGQ WVEVDNSIAH KKVGQALRYR QKQATLAQSL LTDTKGRTET
SSAPLLSDEE ILQAIGEDLS ALNVCSLPSM IEIDGLHGIN WTPTDRAPGF FSGDDIQNAE
AFPSGLLYQD DESVFDTESL EEIGKDWE
|
|---|
| |