Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48449 |
Symbol | |
ID | 7203685 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011685 |
Strand | + |
Start bp | 507823 |
End bp | 508869 |
Gene Length | 1047 bp |
Protein Length | 253 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182851 |
Protein GI | 219125152 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGAATTA ACGGAAACCA CCTTGCAGCC AGTATCTTTT GTCTTGTTTT CCATCTACCC AATCCCACCT CCAACGAATT AAGACTACAC TATGTTCGCT ACCGCAGTCT CGAGACTCAG CTCTCGGTTC CAAATCTTGC CTAGACCAAT TTATCGACGT ACGCTGGCCA CATTGGTTTT CGGCAACAAC GCTCATGCCG AAAAATCCGC GTCAACCGCG ACTTGGTGGG TCGTAGCCGC GTTGGGAGGC TTGACTTTGA CTTCCAAAAC TCTTCTAGAC ATCAAGATTC CCCGCGGTGG AGATGTGATT GCGGCCGGAA CGCCAGTGCA GGAGAAAGCA ACCGGAATTC TTTTCCCCCA GCTCTGTAAC GGGTATTACA TTGCAGGTTG CGGAGTCCGT GTCAAGTACG GATTTGTTAA GGTTTACGCA GTGGGGTCAT ACTTTGACCC ACTCGCGATG AGTGCAGTGA AAAAAGGAAG CCGTGAAAGT ATGGAACAAG CCTTGCTGGA TCCCACGTAT CCTAGAACTA TTCGTATCGT GATGAATCGA GGTTTGTCCA TTGAAAAATA TACGTCTGCA ATCGTCGAGG CCTTGGAACC ACGAATGAAG GGACAGGACC TTGAAAAGTA AGTTGCCTAG TAAAGCTGAG AAAATTTACT TCAAGTCAGT CTCATCTATG CTTTTTACTT GCAGACTCGA GGAATTTAAG CAATTGAACC CAGCGGTTGA CCTCGTTCAA GGTGCTGAAT TGGAGATGAC TATCCGTGGG GACACCATGC TCTACAAGAA TGCGGTGGGT GGTGTTGGAA CAATTCGCTC TCGTGTTTTC ACTGAAGCGA TGTGCGACGT TTTCTATGGG TCCGATGCTG TTTCGCCAAC GATGAAACAG TCCGTGCTCG AAGGGATTCC GAATTTGTAG TGATTCTTGC GACTGGACGT TTTTTCGACG TTTGGCCAGG CTTCATTTCG ATGCTTATCT CACTATCAGT CAAAGAACGC CCTTTCAGCC AAACAACAAA CGGAGCTAAA ATCTAGCCAG GCTTCGC
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Protein sequence | MFATAVSRLS SRFQILPRPI YRRTLATLVF GNNAHAEKSA STATWWVVAA LGGLTLTSKT LLDIKIPRGG DVIAAGTPVQ EKATGILFPQ LCNGYYIAGC GVRVKYGFVK VYAVGSYFDP LAMSAVKKGS RESMEQALLD PTYPRTIRIV MNRGLSIEKY TSAIVEALEP RMKGQDLEKL EEFKQLNPAV DLVQGAELEM TIRGDTMLYK NAVGGVGTIR SRVFTEAMCD VFYGSDAVSP TMKQSVLEGI PNL
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