Gene PHATRDRAFT_48449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48449 
Symbol 
ID7203685 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp507823 
End bp508869 
Gene Length1047 bp 
Protein Length253 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182851 
Protein GI219125152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGAATTA ACGGAAACCA CCTTGCAGCC AGTATCTTTT GTCTTGTTTT CCATCTACCC 
AATCCCACCT CCAACGAATT AAGACTACAC TATGTTCGCT ACCGCAGTCT CGAGACTCAG
CTCTCGGTTC CAAATCTTGC CTAGACCAAT TTATCGACGT ACGCTGGCCA CATTGGTTTT
CGGCAACAAC GCTCATGCCG AAAAATCCGC GTCAACCGCG ACTTGGTGGG TCGTAGCCGC
GTTGGGAGGC TTGACTTTGA CTTCCAAAAC TCTTCTAGAC ATCAAGATTC CCCGCGGTGG
AGATGTGATT GCGGCCGGAA CGCCAGTGCA GGAGAAAGCA ACCGGAATTC TTTTCCCCCA
GCTCTGTAAC GGGTATTACA TTGCAGGTTG CGGAGTCCGT GTCAAGTACG GATTTGTTAA
GGTTTACGCA GTGGGGTCAT ACTTTGACCC ACTCGCGATG AGTGCAGTGA AAAAAGGAAG
CCGTGAAAGT ATGGAACAAG CCTTGCTGGA TCCCACGTAT CCTAGAACTA TTCGTATCGT
GATGAATCGA GGTTTGTCCA TTGAAAAATA TACGTCTGCA ATCGTCGAGG CCTTGGAACC
ACGAATGAAG GGACAGGACC TTGAAAAGTA AGTTGCCTAG TAAAGCTGAG AAAATTTACT
TCAAGTCAGT CTCATCTATG CTTTTTACTT GCAGACTCGA GGAATTTAAG CAATTGAACC
CAGCGGTTGA CCTCGTTCAA GGTGCTGAAT TGGAGATGAC TATCCGTGGG GACACCATGC
TCTACAAGAA TGCGGTGGGT GGTGTTGGAA CAATTCGCTC TCGTGTTTTC ACTGAAGCGA
TGTGCGACGT TTTCTATGGG TCCGATGCTG TTTCGCCAAC GATGAAACAG TCCGTGCTCG
AAGGGATTCC GAATTTGTAG TGATTCTTGC GACTGGACGT TTTTTCGACG TTTGGCCAGG
CTTCATTTCG ATGCTTATCT CACTATCAGT CAAAGAACGC CCTTTCAGCC AAACAACAAA
CGGAGCTAAA ATCTAGCCAG GCTTCGC
 
Protein sequence
MFATAVSRLS SRFQILPRPI YRRTLATLVF GNNAHAEKSA STATWWVVAA LGGLTLTSKT 
LLDIKIPRGG DVIAAGTPVQ EKATGILFPQ LCNGYYIAGC GVRVKYGFVK VYAVGSYFDP
LAMSAVKKGS RESMEQALLD PTYPRTIRIV MNRGLSIEKY TSAIVEALEP RMKGQDLEKL
EEFKQLNPAV DLVQGAELEM TIRGDTMLYK NAVGGVGTIR SRVFTEAMCD VFYGSDAVSP
TMKQSVLEGI PNL