| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48447 |
|---|
| Symbol | |
|---|
| ID | 7203623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011685 |
|---|
| Strand | + |
|---|
| Start bp | 498044 |
|---|
| End bp | 499698 |
|---|
| Gene Length | 1655 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182850 |
|---|
| Protein GI | 219125150 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.017641 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CACGATTACA CCCAGAGTTC TAAGAACGTG AGCACATCCG CCCCGAACTC TGTGTTGGTG
CCCCAGAACA GTCACGCTAA AATCTCTAAA GTGAGTTTAG CACTAAAAGC AATTAACTGT
TGGACCAGTC ACTATTCCTT TCTTGTACTT CTACTGCTCA GCGAATTGAT TTCTAAAGAG
AATATGGTTT GTAGAAAAGT GAAAGTTGAC GAGACTTTAA AAAAGGTCAA TCTAGCGATG
AACCGAGACT CTGCGCAGGG ATCAGGTTTG TCAATGACCA GAGTCGGAGC TGACAGTGAA
AATATGAAAA AAAAGGGTCG ACTGCGACGG CAAAAAGCAA CGAAGAGCTA TTTACAGTTT
TTGAAAGGGA AAGCGAACAA GCCTATTGCA ATTATGACAA GACCTATTTG CCCTTCGGAT
TTAAGTGCCC CTTTGGAGGG GTTCAGAAGC GACGGAGAAC GCCGATTGAC GATTCCTTCC
CAGCAGTTGC CTGATGGAAT GGATATCGTG GTGGAAGATG ATCTGATAAA AACGTCGCCG
AGTGTTCACA GTAGACTGCT GGCTATCGTC TCAACTACTT TACGGGATCA GGCTAGTTCA
ACAATGTCAG ATGGACTCGT AGATCAGTTG ATTGAAGGTT TAGAAGACTT GGGATGCCGG
TTTTTGCTTC CAACAAAGAT AGCGGAAGCA CAATTTCCGA GCAACAATGA CTTGCTTTCA
GAGGAAAAAT TGTATCGTGA ATTGGGATCA GGTAGCGCGG ACACGAAGAG GCTTTTTCTT
CGAAAGTATG TCACTATTGT AGCTTCGAGG TATAGCGCCA AGGTTACAAA ACGGAAACGA
GACGTCAACT CTTCTCACAA TCGGCCAACT CGTGCGATGG CTCCTGGCAA GAAGTCAAAG
ATACTTCCCG TTCCTACGGC AAAGGTAGAC AATAGCGAGC TGGGTCAACA TACCACCAAT
TTAGAGCTAT CATCGCAAAC AGCCGAACTT CAAAAAAAGT GTACCAAAGC TTCGGAATTT
CTATCTCCAC AAGTGAGCAA GAATGTGTCC CTGGCTACCA CCCCCCAATC AGGTCCCATA
AAAACGCTCC ATGACCACGA TGTAGTCTTG GGACGAGGGA ATGGCACCGC GGCGTTGGCT
GGAAACATAA GATTCCGTAG CTTTGTTTGG GAATCAAAGG AAGCTTATAA CCAGGCCTCA
AGGTATGAAA AATCACCAGT CGCTTACCTT GTTATGAATC GTGTAAAAGC ATTGGACCCT
CCTGGGCAAT TTTTAGAAAT GTGTTGTGAT GGTACTTTCA TCGTCGCGCC CTTTGAAAAA
GCCTTTGAAA AGACATGCCA AGCTCTCAGA GAGAAAAAAT GGCTTTCTGC TCCTTCACGA
ACTTACAAGC CGAAAGGAAA CGGAGGAGGT GTACCCCAAC CATCAAAATC CTCGGAAAAA
GATGTGCACG ATGAGCGTGG AAGGAAAGTT GGTGTGGGAT CCCGTGTATC TGTCTTTTGG
CCGTTGGACA ATACGCACTA CGCGGCAAGA GTCTGTGAAA GGGGGGAGCA AGGATGGCAA
TTGCTTTATG AAGAAGATGG AGAAAAGGAA TGGTTGGACC TAAAAAACCA CAGCTTTGTG
GTTCTTAGTT AAAGATTTGA GATGACAGCT CACAC
|
|---|
| Protein sequence | MVCRKVKVDE TLKKVNLAMN RDSAQGSGLS MTRVGADSEN MKKKGRLRRQ KATKSYLQFL
KGKANKPIAI MTRPICPSDL SAPLEGFRSD GERRLTIPSQ QLPDGMDIVV EDDLIKTSPS
VHSRLLAIVS TTLRDQASST MSDGLVDQLI EGLEDLGCRF LLPTKIAEAQ FPSNNDLLSE
EKLYRELGSG SADTKRLFLR KYVTIVASRY SAKVTKRKRD VNSSHNRPTR AMAPGKKSKI
LPVPTAKVDN SELGQHTTNL ELSSQTAELQ KKCTKASEFL SPQVSKNVSL ATTPQSGPIK
TLHDHDVVLG RGNGTAALAG NIRFRSFVWE SKEAYNQASR YEKSPVAYLV MNRVKALDPP
GQFLEMCCDG TFIVAPFEKA FEKTCQALRE KKWLSAPSRT YKPKGNGGGV PQPSKSSEKD
VHDERGRKVG VGSRVSVFWP LDNTHYAARV CERGEQGWQL LYEEDGEKEW LDLKNHSFVV
LS
|
|---|
| |