Gene PHATRDRAFT_48410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48410 
Symbol 
ID7203663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp374749 
End bp376084 
Gene Length1336 bp 
Protein Length428 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182955 
Protein GI219125368 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.261739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGACTCCTTC CTTACTGCGT CCACCACCAT TACCACTACA ATTACCAGTA TGGTCGAAGT 
TGAGGATGTG GAAGAAACGC AGTTGTACGC GGACTTGCGG GGTTTCTTGT TGCACGCCGA
CCCCACACGG ACGGACGTCC GCCGCGCCGC CACGGAGGCG GTCCTGCAGG TGCGGGACAC
CCCGGGTCGG ACCCAGATGG TGCGGCACGG CATCGTTCCG GCACTCGCAC GCAATGTATC
CCACGACGAT CCTCACGTCG CCATTTCCGC TCTACGGGGA CTCGTGCAAC TGTCGGCACA
CGGACCGAGC GCCAATCAGG CCGTCGAAGA TCTCACCCAA GCCGGCGGAC TCAACCGTAT
GCTGGAAATT GTACTCAGTC GACCGGAAGA CGGTAGTGGT GAGAAAAACA CTGGTGCGGA
CTGGAAACAA CGGGTCAACT TGGCCATGGC CCTCTTGGCA AACATGACGC GGGTGGAAAA
GGGGGCCGTC GAACTGGTGG GTCGATCCCT ACCCGACCGA GCAATTGTGA AACCTTTGGT
CGATGCCGAC AACACTGCCG AGTCAGGAAT ATTGCCGACC AAACCCAGTC TCGAATTAAT
ACTGGCGCGC TTCATGAACA CTTCGTTTAT AGAATCCACG GATTACGATG CCTTGGAGGG
TGAAGTCTTG GACAGCGACC CGTCCGATCC GTACCAACAT TTTGCGGCCG TTCTCATGAA
CGCCACCCAG GTAGAGGCCG GTCGCCAGTT TGCTCTTCGT ATACACCGCA ATCCCAATCG
CAAGGACGAT TTGGGTTGGA CGGTACTGGA GCGAATTCTG GTACAGCTAA AGTCGCCCAA
TCCGCTGCGA CGACGGGGGG TGGCGGGGAC GATTCGCAAT TGTTGTTTGG AACGGGATGC
GGCCTGGTGG ATGCTACACG TCCTCAATAT TACGAAACAT ATACTGTATC CCCTCGCAGG
CCCGGAAGAG CTCGATTTGG ACGAAAAGAA AGGATTGGAT CCGGATTTGT GGCTGGAAGG
CCCCGACAAG AAAAGGGAGC CGGATCACTA CACACGACTG TTTTTGGTGG AAGCGATACT
CCTGCTGTGC TCTACGGGAA GGAAAAACCG CGAACAGTTG CGATTGAATC GGGTTTACGT
CGTATTGAAA TGGGCCGATA TGGTTGAAGA ACAAGAGGAT GTATCGGAGT GTATCAATGA
ATGTGTGCAG TACCTACGCC GCGATGAGGA AGGAACGGAG GAGGGTAGTA GTGACAAGCT
GGTTCATGAT GCCTACAACA AACCATCTAT CGCTCAGCAA GTCGGTACAA GCGCAGACTT
TGACGATGTC GATTAA
 
Protein sequence
MVEVEDVEET QLYADLRGFL LHADPTRTDV RRAATEAVLQ VRDTPGRTQM VRHGIVPALA 
RNVSHDDPHV AISALRGLVQ LSAHGPSANQ AVEDLTQAGG LNRMLEIVLS RPEDGSGEKN
TGADWKQRVN LAMALLANMT RVEKGAVELV GRSLPDRAIV KPLVDADNTA ESGILPTKPS
LELILARFMN TSFIESTDYD ALEGEVLDSD PSDPYQHFAA VLMNATQVEA GRQFALRIHR
NPNRKDDLGW TVLERILVQL KSPNPLRRRG VAGTIRNCCL ERDAAWWMLH VLNITKHILY
PLAGPEELDL DEKKGLDPDL WLEGPDKKRE PDHYTRLFLV EAILLLCSTG RKNREQLRLN
RVYVVLKWAD MVEEQEDVSE CINECVQYLR RDEEGTEEGS SDKLVHDAYN KPSIAQQVGT
SADFDDVD