Gene PHATRDRAFT_48314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48314 
Symbol 
ID7203787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand+ 
Start bp96063 
End bp96760 
Gene Length698 bp 
Protein Length184 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182770 
Protein GI219124984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00233708 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAAGATCCTT AGGGTCTGGT TTTCTCATCC GTGTCACGTA TAATTCGCTT CTCCCCGCAA 
TGTGCAACGC CAAGTCTGCA ATGAACAACA TCCTTCACGG ACCAGCATCA GAGGCGCTAG 
AACGCACCAC CAAGCGAAGG CGAATAGGAA GCCAAAACCA GAGTATGCCA CCTGCTGCTG 
ATCCGTTTTC CTCGGAAGAC TTGTTTCAGT CCGTCACGTC TGCATCCGAC GAAGGATTCC 
CTTCCATCGG ATGGAACTTT GACGATGATG AAACCGACTT AGAACCATTT ATGGCAACGA 
CCGGTGACAA CTTTCGACAT CGAATCAAAG GAACTAAACG CGAACGTGGA GGTCTCCTCA 
GGTGCAAATC TTTCAGACAA GGCCTTTCCG GGATCGCCTT GGAAGAGCAT TTCTGTAGTA 
CGTCGAAGTC CTTGGAAACA TGCGATACTT TGCAAGTATG CAACGAAAGA GAAAGCTCTC 
TCTGTGTAAC AAAAAATCTT CCCCATGTTC CGTTCGGATC GGCGCTGCAT GGCCATCGAT 
TTCGCGACCT TTCTGCAACC AGCTTGATAA GGAAAGAAGG TCCGAAGCCA CACGCTCTCT 
GCCCCCTTGC CTGATTTTCT CGAGGAGACT GTTGCCGCAT CAACGTTCTT CCCCAGCTAC 
TGTACAAGCA TTTTAAAAAA CTAATGCTAT GATTTTGC
 
Protein sequence
MCNAKSAMNN ILHGPASEAL ERTTKRRRIG SQNQSMPPAA DPFSSEDLFQ SVTSASDEGF 
PSIGWNFDDD ETDLEPFMAT TGDNFRHRIK GTKRERGGLL RCKSFRQGLS GIALEEHFCS 
TSKSLETCDT LQVCNERESS LCVTKNLPHV PFGSALHGHR FRDLSATSLI RKEGPKPHAL 
CPLA