Gene PHATRDRAFT_48182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48182 
Symbol 
ID7203315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp434979 
End bp435917 
Gene Length939 bp 
Protein Length308 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182534 
Protein GI219124488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAGAA CAATGAGCGG TTTTAAAGTG CGCTTTGAGC CCTGTGCTGT TTTGAAGGTA 
GCCCTGGCCT TTGCAGCTCT CATGTCTGTG ATGTTTTCTG TCATTCGCTC GAACGATTCC
ACTAGAACGG CAGAACATCC AAAGCAGTCA ATTTCTCTCG CAAAGCTCGG TAAAAAAACG
CCTGTTCTCG TGATGGGCTT GCCTCGTTCC GGAAGTGCGT CGTTGCACGA ATTTTTTCGG
TGCAACAACG TCAAATCCAG TCACTTTTGT TGTGGCACAA GCCAAAAGAC TTCCTTTGCT
TGCGAGCCAG ATCAACCGAC ATGCGGCCGC TGTGTCCACC AAAATTTGAA CCAAAGTCTT
CCGGCATTTC AGGGCTGCGG CAACTTTTCC GTCTACAGCC AGTTCGACGT GGAAAGCGGC
CAACCCTTTT CGTGGTTTCT GCCACAGCAT TTCGCTTTGC CACTCCTACA CGAAAGTTTT
CCAGAGGCGG TATGGATACT CAATCGCAGG GCGGATGCGC GCGTATGGGC GAGGGGAGTC
CTCCACTGGT ATTCCGTAAG TCGGCGTGTG ATGAATGCGT TTGGGCTACA GTATCATCAT
CCCACTCTGA TTGCGGCAAA AATCTACGAT GCTCCAGTTC GTCCCTTGAC GGAGGACGGT
TTAATTGCGG ATATCTCGCT AAGTTTAGCA CGAGCTGAAA ATGTAACTGA GCATAAACGC
CGTCTGGACG AGCTCACCAG TGTGTACGAA GCGCACTTAC ACCGGGTGCG CGCATTTGTC
ACTGCAAACC CTTCGCACTC AATGCTTGAA ATTGATGTGG ACGATCCTGC CTCCGGAGAA
ACCCTCTCTG CATTTTTTGG TGGTGCTCGC GCCTCCTGCT GGGTATTCGA TGCACAGTCC
CTAGACAATG ACTGGAAGAA ATTTTCACTT CAAATTTAA
 
Protein sequence
MSGFKVRFEP CAVLKVALAF AALMSVMFSV IRSNDSTRTA EHPKQSISLA KLGKKTPVLV 
MGLPRSGSAS LHEFFRCNNV KSSHFCCGTS QKTSFACEPD QPTCGRCVHQ NLNQSLPAFQ
GCGNFSVYSQ FDVESGQPFS WFLPQHFALP LLHESFPEAV WILNRRADAR VWARGVLHWY
SVSRRVMNAF GLQYHHPTLI AAKIYDAPVR PLTEDGLIAD ISLSLARAEN VTEHKRRLDE
LTSVYEAHLH RVRAFVTANP SHSMLEIDVD DPASGETLSA FFGGARASCW VFDAQSLDND
WKKFSLQI