Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48182 |
Symbol | |
ID | 7203315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | + |
Start bp | 434979 |
End bp | 435917 |
Gene Length | 939 bp |
Protein Length | 308 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182534 |
Protein GI | 219124488 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATAGAA CAATGAGCGG TTTTAAAGTG CGCTTTGAGC CCTGTGCTGT TTTGAAGGTA GCCCTGGCCT TTGCAGCTCT CATGTCTGTG ATGTTTTCTG TCATTCGCTC GAACGATTCC ACTAGAACGG CAGAACATCC AAAGCAGTCA ATTTCTCTCG CAAAGCTCGG TAAAAAAACG CCTGTTCTCG TGATGGGCTT GCCTCGTTCC GGAAGTGCGT CGTTGCACGA ATTTTTTCGG TGCAACAACG TCAAATCCAG TCACTTTTGT TGTGGCACAA GCCAAAAGAC TTCCTTTGCT TGCGAGCCAG ATCAACCGAC ATGCGGCCGC TGTGTCCACC AAAATTTGAA CCAAAGTCTT CCGGCATTTC AGGGCTGCGG CAACTTTTCC GTCTACAGCC AGTTCGACGT GGAAAGCGGC CAACCCTTTT CGTGGTTTCT GCCACAGCAT TTCGCTTTGC CACTCCTACA CGAAAGTTTT CCAGAGGCGG TATGGATACT CAATCGCAGG GCGGATGCGC GCGTATGGGC GAGGGGAGTC CTCCACTGGT ATTCCGTAAG TCGGCGTGTG ATGAATGCGT TTGGGCTACA GTATCATCAT CCCACTCTGA TTGCGGCAAA AATCTACGAT GCTCCAGTTC GTCCCTTGAC GGAGGACGGT TTAATTGCGG ATATCTCGCT AAGTTTAGCA CGAGCTGAAA ATGTAACTGA GCATAAACGC CGTCTGGACG AGCTCACCAG TGTGTACGAA GCGCACTTAC ACCGGGTGCG CGCATTTGTC ACTGCAAACC CTTCGCACTC AATGCTTGAA ATTGATGTGG ACGATCCTGC CTCCGGAGAA ACCCTCTCTG CATTTTTTGG TGGTGCTCGC GCCTCCTGCT GGGTATTCGA TGCACAGTCC CTAGACAATG ACTGGAAGAA ATTTTCACTT CAAATTTAA
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Protein sequence | MSGFKVRFEP CAVLKVALAF AALMSVMFSV IRSNDSTRTA EHPKQSISLA KLGKKTPVLV MGLPRSGSAS LHEFFRCNNV KSSHFCCGTS QKTSFACEPD QPTCGRCVHQ NLNQSLPAFQ GCGNFSVYSQ FDVESGQPFS WFLPQHFALP LLHESFPEAV WILNRRADAR VWARGVLHWY SVSRRVMNAF GLQYHHPTLI AAKIYDAPVR PLTEDGLIAD ISLSLARAEN VTEHKRRLDE LTSVYEAHLH RVRAFVTANP SHSMLEIDVD DPASGETLSA FFGGARASCW VFDAQSLDND WKKFSLQI
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