| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48134 |
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| Symbol | |
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| ID | 7203482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011684 |
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| Strand | + |
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| Start bp | 293094 |
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| End bp | 295934 |
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| Gene Length | 2841 bp |
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| Protein Length | 946 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182508 |
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| Protein GI | 219124433 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.252126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGTTT CATCGAGCTG TCCTTACCCA TCTTCGGCTC ACGGAACGGC GAGTCGACGC
GGCCACAAAA AGATGCGCCA CATCAAGAAA GAGCAAGCAC CAGCTGTACC GACCATAGAA
ATTCAGACAG TCCTGCGTCT CCGCCCGCTC CTGAAAAAAG AACGGGACGA CCACATCGTC
ATTGAGCCGC TACTTCAAAA CAACGTTCCA TCACGGTCCG TTGCCTTGCA TCCAATTCCT
CGTCCAGAAG TAAGTGCAAG CAGTCAGCTT GTGCGCCAGA ACTTTTCGCC AGAAACAGTC
GTCACGTCGC ACGATTTGGA GTTTACGACA GATCATGTGT TTTCCTCTGA CACCTCTCAA
GAAAAACTGT ACTTTTCAAT CGGCTCGCCC ATAGCATTGT CATCTATGGA TTCGCTGCTG
AAAGGCTCTA AGAAGACACA CATGATAGTA ATTACTGGAT CTAAGAATAG TGGTAGATCT
TTCTCGACCT TTGGTCCAGT TTCCAAAAGG AAACATGCCT CAGACGGTTT GGTACCTCGG
ATACTCGACA GTCTTTTTAG TCAGGCGCGT CATCAAATGA AACACGCGGC AGGGAACTTC
GCAGTCAATA TTTCCATCAT GCAAGTTCAT GATGAGAAGA GCGACGAATG TACGTTGCAC
GATCTCCTAC AGCCCATCAA AAGCGGAGGA ACTCCAAGAA AGCGGGCGGC GACTGGCTTT
GCACATTGGA GTGGTACCGG AAACGCAAAA GCCAACGCCG TGAAATCTCT TGTGGCGAAC
TTTGAGCGGC AACAATGCGC TACGCGTGCT ACCAAGACCA TTCCCATGAG GCGTTCGCCG
GCTCGTGGAT ACAATTCAAT GAAAGAACCG GTCTTTGTTG AACAGGATGC CAACACTTCC
GATTTTCAGA TAATCAATGG TCAGATCAAA GCATGCTACA ATACCGAAGA AGCTCGCGAA
ATACTGATTG CTGCAACAAA GCGGTCCGAA AAGATGTCAA AAGGCCATTT GCTCTCATCG
CACGTACTCG TCACTATGGA AACATCTTGG ATGGGCAAAA ACGAGACAAA ATTTGGAGGA
ACGATTGTCG TTCTCGATCT CGCAGCACCC GCTTTTCAAG ACAATACCAC ATCGATGCCC
AATCATAGAC GCGTCAAGGA CAGTATCCAG ACTAGACACG ATGCGTATTG GGCTGTTCGT
AAATGCTTTG AAACTCTGCA GTATAATCAA ACTGTAGCCT CGCTTATGTG CGGTGATGGC
CGGCAAGAGA GCTTGAAAAA GGTCCCGTAC CGTCAGCACA TGTTGACCAT GCTTCTACAG
CGCTTTTTTA AAGGAACCAC GTCCATCACG TACATGCTCA CGGTGTATCC AGGTCACACC
GACTATGCTG AAAAGAAAAA TCTTTTGCAA GACCTACAAA TTTTGTCTAC ACGCGAGCCG
GGGCAATCGG CTATGACCGG ATTGCGTAGT CGGCGTCCCA GTGTGGAATC CGGAGGAGAT
CAAAAGCCAA ACAACCAGCT AGCACCGCCC TTGTCCATGG CTTCACATGC TACCAACCGT
GGATCGCAGC CTGTAGATCG GCAGATATTA AAGAAAGCAA TCTTGTTGAC ACCGATGAAG
GAAGACATGA TTGAGATCCC AAACATTGCC AAGAATCCTT CCCTGACGTA CAGTGACTCA
ACACAAGAGA AAATTATGGA CGACGGGGAT GAGCGGAGAT TTATTGACGA TGAATATCTG
GTGCCTTTGC CTCCCCCACC TATTGCTCCG AGTTTTTCCG CTCGGCAATT GCCTCAGTAC
ATACTGTCGC CCGACGCCAG CGCGCCACCG GAAGACGGAA TCGAAGCAGG CCTAGCCCCG
AGTTTGGTGA CAACCCCAAG ATTGGCCACG GTACCATCCA CTTTTGACTT TGCCCGCGAG
CCCAAATATG ATCTCTGTAC TGCTGAACAT TCTCCTCGTC CCGCAGAGCC AGACTCGCAT
CAGACAGACT TCGTCTGTGC AGTAGAGGAG CGCCAGTCCC CTACGGCTCA TCCAGATCCA
TCCTCACTGA TCGCAAACCA GCCGCGCTCT CCAATACAAG AATTGGCACA GTCGGTTGAC
AGAAAGCACC GCAACGTATT CAATTCCAAG AGCTTTCGCC CAGTAAAGAC ATTCAACAAA
GTTGTACTTG CATCAAAAAA GAAGGCCAGC CAAGTAATTG CATCGCTGGA GCAACGTCCA
TTTGTGGATC CGGAAGTAAA GGTTGGCCCT TCGAATTTGT CTCTTTCTGA CACACATGCA
GCGCCAGTTG ATGACAGAGA ATACATACTT GAGCTCGAAC GAAAAAACTC CATGTTGGTG
GAAGAAAACG AGAGACTTCG AGCACGCAAC GAACAACTTG AGATCGAAAA TAAGTCAATT
GTGTCACGCG GCTGGGACTC AGTACTTTCA AATGACGAAA ACATTAAGCC AATGGATGAA
AGGCGGCCAC CGAGCATAAC GAAGCCCTTG GCCCAAAAAC TGTCACAACT GGTGCAGACC
AAAAGTTCCA ACACTGGTTC CAGAAGTACA GACAACCCAT GGAATCGACA TGCCAAAACT
GCAATCCCGC CTGTTCCTTA TTCTACTCAT AACGATGCCC ATGGACAGCA CTCCCCGAAC
TTTCGGTCCG CAGATTTACA ACGCACTGAG CAAAACCCTC GTTTTCGTCA CATTTCCGAA
ATGTCTAGTG GTAAAGGTAG TAAACCCCCA CCTAGCAAGT GGATAGATGG CAACAAAGGT
AGCAAGTCTC CCAGTTTTGT GTTGAATCTG CAGGGGGGCT TTCACGGTGG CCACCCTGGG
GCTGTTGTGC CCGGAGGCTA G
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| Protein sequence | MVVSSSCPYP SSAHGTASRR GHKKMRHIKK EQAPAVPTIE IQTVLRLRPL LKKERDDHIV
IEPLLQNNVP SRSVALHPIP RPEVSASSQL VRQNFSPETV VTSHDLEFTT DHVFSSDTSQ
EKLYFSIGSP IALSSMDSLL KGSKKTHMIV ITGSKNSGRS FSTFGPVSKR KHASDGLVPR
ILDSLFSQAR HQMKHAAGNF AVNISIMQVH DEKSDECTLH DLLQPIKSGG TPRKRAATGF
AHWSGTGNAK ANAVKSLVAN FERQQCATRA TKTIPMRRSP ARGYNSMKEP VFVEQDANTS
DFQIINGQIK ACYNTEEARE ILIAATKRSE KMSKGHLLSS HVLVTMETSW MGKNETKFGG
TIVVLDLAAP AFQDNTTSMP NHRRVKDSIQ TRHDAYWAVR KCFETLQYNQ TVASLMCGDG
RQESLKKVPY RQHMLTMLLQ RFFKGTTSIT YMLTVYPGHT DYAEKKNLLQ DLQILSTREP
GQSAMTGLRS RRPSVESGGD QKPNNQLAPP LSMASHATNR GSQPVDRQIL KKAILLTPMK
EDMIEIPNIA KNPSLTYSDS TQEKIMDDGD ERRFIDDEYL VPLPPPPIAP SFSARQLPQY
ILSPDASAPP EDGIEAGLAP SLVTTPRLAT VPSTFDFARE PKYDLCTAEH SPRPAEPDSH
QTDFVCAVEE RQSPTAHPDP SSLIANQPRS PIQELAQSVD RKHRNVFNSK SFRPVKTFNK
VVLASKKKAS QVIASLEQRP FVDPEVKVGP SNLSLSDTHA APVDDREYIL ELERKNSMLV
EENERLRARN EQLEIENKSI VSRGWDSVLS NDENIKPMDE RRPPSITKPL AQKLSQLVQT
KSSNTGSRST DNPWNRHAKT AIPPVPYSTH NDAHGQHSPN FRSADLQRTE QNPRFRHISE
MSSGKGSKPP PSKWIDGNKG SKSPSFVLNL QGGFHGGHPG AVVPGG
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