| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48084 |
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| Symbol | |
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| ID | 7203456 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011684 |
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| Strand | - |
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| Start bp | 147152 |
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| End bp | 149604 |
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| Gene Length | 2453 bp |
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| Protein Length | 538 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182623 |
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| Protein GI | 219124674 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0292036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGAACATTGG TCTCGTTCAA AAACTCACAC CTGTTTTACA CACAGGTATA TTCATTCATA
CAGCTAACTT GGGATTCGAT AATGATGAAA AACACGAGTG CGTTGTTCGT GTGGTTGGTA
TGGGGAGTGG GAAGGAGTCT CGCGGCGGAA ATTCCTGCGG ATACGGACGC GGATTCGAAT
TCCAGTAAAC TCATGATCCA CGTAAGTTTT CTAATGAATC GTGCCGCGTC GTGGCGCGCT
ATGGTTGCAT TTTTACTACA CCGCAAGGAT GCTGGCCTGT CGATATCCAG CGGAAAGGCG
TAGATGAGCA CGGAGACCAA GGGAGTCTTT CTATACGACT CGTGCCTCGA AACGTCCCAG
GCATTTTCTG GACGCAAATG CCCACTCACG TACACGACAA AACTACTCTA CACTGTCCAC
GCATTCCCTC AAATCACTCA CTCACTCACT GCACTATAGG TCCCTCACCG GCTTTACCAG
GAAGGAGGAT ACCGGCACCG GGAGGCGCTC TTTGGAATTT CTCCCTACGG GGGATCGATT
GTCCAGAATG TCTACTACAC AAACTCGGAC CTTTGCGAAA TCGACGACAT GAGTGGAGGC
TTTCCCGCAC GAGAAAAGGA AGGTACTCGT ATGAAACCTT ACCCGTCGCC CTTTTTGCTC
ATGATGGATC GCGGACACTG CACCTTTGTG CAAAAGGTAC GTACATCTCT TTGTGTGTGT
AGGCGAAGAG CATGGTCAGG ATCCGACCGA GACATTACTC AGTGCGGCTT TGTTCGTTTT
CTCTCATTCG ATCCAACGTT TTTCGTATGG CGACTTTTGT ACTCACGCAC TCCACGACAT
ATTTCTCTAT GCACACTAGG TCCGCAACGC GCAACACATG GGTGCTTCGG GCGTCTTGAT
TGCCGACAAC ACCTGCATCT GTTCCGACAC AACCTGCACC GCCGCCAACC CCACCGCACC
CTGTGAAATG ACCGAACCCA TCATGGCGGA CGACGGATCC GGCGCCGACA TTTCCATACC
CAGCTTTTTG CTCTACAAAA CCGACGCGGA CAAAATCATT GCCGAAGTCA AGGAAAATAG
GCCCGTCCAA GCCGAAATGG CCTGGTCTCT TCCCTCACCC GATGATCGCG TCGAGTACGA
CTTGTGGACG TCCCCTTCCG ACGGAATCTC CGCCGAATTT ATTCGAGACT GGAAGGACGT
CGCCATCGCC CTTGGTGACA AGGCATACTT TACCCCACAC ATGTACCTTC ACGACGGCGA
AAAGTCCGGA TGCCACGCCC CCAACGGAGA TAATTACTGC TTCACGCTCT GTACCAACGC
GGGAAGGTGC GTCAATGTCG GTCCCCTCGT ATGCAAAATG GTCGCACCGA TAGGAAAACC
TCACACATAT TCTCGTGTTA TGTCCCCATT ACTACCGTGT GTTTGTTGTA CCGTTAGATA
TTGCGCCACC GATCCGGACG ATGATTTGAC CAAGGGCATT TCCGGAGGTG ACGTAGTACG
GGAAAGTCTC CGTCGTATCT GCATCTGGAG TCATTACGGT GCGGCCAACG GCATCGGCCG
AGAGTGGTGG GACTACGTCA ACGAATTCAA CCAGCGATGC AGCGCGGCCG ACTACTTCGC
CGACGATGCC TGCATCAAGG ACGCCTACAA ACACTCCAAA GTGAACGGCG ACACCGTGGA
AGAGTGCATG AGCAATAGCG GTGGTACCAA ACAGGACGTG GTCAACACCA AACTCAAGAC
AGAAATAGAT TTGCAATATC AGCAGGGTGT AGTCGTCATC CCCACAGCCT ACGTCAATAC
GGCCGTCATT CGCGGCGCGA TGCAGCCCTC CACCGTCTTT ACCGCCATTT GCGCCGGGTA
CTTGGCGGGC ACGGCCCCGG CCAAGTGTAC CCAGTGCAGT GCCTGTCCCG ATCCCGTCGG
CTGCATCCGC ACCGGCAAGT GTACCTCGGA ATCTCCCGCT TACGCATCCA CGGACTCGGG
AGTCTCAACC CACACCTTTG CCACCTCCAT GCTTTTTGTC GTGGCACTCT TTAGCGGGCT
CGGCGTATGG CAATATAAAC GCAGTCGCGA GGAAATGCGG GACCAAGTCC GCGGAATTCT
CGCCGAATAC ATGCCTTTGG AAGATCAGGA TCAGATGAAC GGCAAGGGTG ACGACAATGG
TAGTAGTGGC ATGATGAGTA ATCCCATGGG CTTTGCACAG GGCGGTTCTG GCATGTCGCT
CATTTCGTAG AAAGGAATGC ATCTCGTACC CAAACATCGC CTGCGATACG AACCACGATC
CCTTTTTTAC ACACTTCACT GCATAAATGT TTTATTTTAC GATATCACTG TGACTCGCTC
ACGTAGGAAG ACGGGTATGC AAGAAATTGA AGGATTCAGC TGTGTGTAGC ATCGGGTTCA
TAGCCTTGTG CCGACGCTCG TTTTCTTGTT TTGTAAGAAG CACATTATTT ACA
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| Protein sequence | MMKNTSALFV WLVWGVGRSL AAEIPADTDA DSNSSKLMIH VPHRLYQEGG YRHREALFGI
SPYGGSIVQN VYYTNSDLCE IDDMSGGFPA REKEGTRMKP YPSPFLLMMD RGHCTFVQKV
RNAQHMGASG VLIADNTCIC SDTTCTAANP TAPCEMTEPI MADDGSGADI SIPSFLLYKT
DADKIIAEVK ENRPVQAEMA WSLPSPDDRV EYDLWTSPSD GISAEFIRDW KDVAIALGDK
AYFTPHMYLH DGEKSGCHAP NGDNYCFTLC TNAGRYCATD PDDDLTKGIS GGDVVRESLR
RICIWSHYGA ANGIGREWWD YVNEFNQRCS AADYFADDAC IKDAYKHSKV NGDTVEECMS
NSGGTKQDVV NTKLKTEIDL QYQQGVVVIP TAYVNTAVIR GAMQPSTVFT AICAGYLAGT
APAKCTQCSA CPDPVGCIRT GKCTSESPAY ASTDSGVSTH TFATSMLFVV ALFSGLGVWQ
YKRSREEMRD QVRGILAEYM PLEDQDQMNG KGDDNGSSGM MSNPMGFAQG GSGMSLIS
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