Gene PHATRDRAFT_48012 details

Gene Information

• Locus tag: PHATRDRAFT_48012
• ID: 7203007
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: +
• Start bp: 704478
• End bp: 706558
• Gene Length: 2081 bp
• Protein Length: 617 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002182281
• Protein GI: 219123957

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTTGATTGAT CACCATGGCG CCTTCTGTCA CTCGTTCCGC GGAGGGAGTA GTCCTAGATG 
ACAAGAAGAA TTGGGTAGTA GGGAAGAAGA TTGGATCCGG TGTCCAAGGA ACCGTCCACG 
AAGTCTTGGC GAACGGAGCC GTCAGCGAGT TCGCCGTCAA GCTCGCCCCC GTGCCGACGG 
TCAAGACCAA AGGACGACAG CTGTCGCCCG CACAACAAAA CGCGAACGCG ATCTACCGCG 
AGTCCGTGGT ATATCAAAAT GCTTTGGGAT CTCTAAAAGG GACCTTTATC CCCAAGGTCG 
CTTCCCCCCA AGCATTTAAG GAAGTCAGCG GTAAGTGTCC AAATTTTGCA CCGTATTTTT 
CGATTTCTAG AAATTCCTAC CGGGATGTAC GTTCCCGCAA TATTCTCAAT CGCTGATTCA 
TGTCGATTTA CGCAGGGTTT AATTGCTTGT TTCTGGAGCG CATGGACTTG CCGCTCGAAA 
ATATTGTTCC TCTGTTAGTA AAGCGGCCCA AAATTGACTT GGGACCGGTT GCCCTCCAGC 
TCTTGAACAT TTTGCAAGCG GTTCACGCTC AATGTCATTT CCTCACGGAT GTCAAGCTCG 
AAAACTTCAT GCTGGCCAGA GCCTCTAAAG TATCTTCTAC ACTAGAAGCC CGGATTCGCG 
TAATTGATCT CGCCATGGCC GAGCCCTCCA AGATGGTCGG CGGAAAGCTC CAGAACGTGA 
CCAAGCCGGA AATGGCGGGG ACTCCTTTGT ACGCAAGTCT CCATGTGCAC GCATTGCAAA 
CGCACTCATT TCGGGATGAC GTTGAGTCGG TTCTCTACGT TCTTGCGGAG CTAGTGATTC 
GTACCCAAGC CACACAGGAG GGCACCTTAC GGCGATACGA GGCGACTCGC GGGACGGACG 
TTCCAACATT CTTACCGTGG AGCCACGGCG CTTCCACCGA GCAGATTGGT GAACTCAAAA 
AGCGCCTAGT GACGGACCCA AAGTCTGAAT TTTACCAAAG GATGCCTCCG TCGATTGCTA 
AATCCATTCG TGATGCCTTG CATATTGTAT GGGAATGTGA ATTTAACGAA CATCCGGATT 
GGAGCGCGCT GGAACATGTT TTACACAAAT TGGTCTTTCC TAAAACCGTG CCGAAATCGC 
AGGCCGCGGG AACAGCGAAA GCGCCACCCG TATCTAAATC TAAGAATAGC TTGAAAGTAT 
CGCATCGGGA TCAGCTTGAA GACGCTCGTC GCAGGGCACG GGAGTATATG GGAGCTCCGG 
AGATCCAAAG TCAAGCATCA AAGGTTGTAT CGCGTACTTC GGAACGAGCT CAGCGGGCTG 
CCAAACGCAG CTCATTGGAA TCGCGGGCGT CTCCCAAGCA TAGACCACCG AGCTCGCGCT 
ACTTTTTGGA CAGTAACAGT GATGAAGGAT CGCCCGGAAG ACTTTCACCG GCCGAGCCAG 
CCGTAGATGT CGACGGTGAC GTAAGTATGG ACGACGCGAA AGACTACGAG TCCGACGATG 
AGACATTCTA CACAACTCAT GATCCCCTGA ACTCGTCATT GGGATCCCCT GCCATGATGT 
CCGTCGCCTC GGTTCAAGAG GAAACGATGG AACTGGCATC GGACGAGAAC CAGAAACCGG 
GTCTGTTGAC AGTTTGGCTC AAGGTCACCG CTGGGCCTAG CCGTGGACGA AAGATATGCT 
TGACGGAAGG AAGTTCTGAG GTAATCACGA TCGGATCCAA ACCGAACACC AAGGGAGAAT 
CTTTCCGGCT CGGCCCAGAT GTGGAAGCCA ACCATGCACG GTTTACTCTG CAAGTCCAGC 
GTAGTAAGCG TGCCGGAGTG TCCTTTAAAG TTCAAGTGGA TGATCTCAAA ACATCGAGTG 
GAGTCACAAT ATTGGAACAT CGTATTTCGA AGGGAAAAAG TGGATGGGTT TTTGCGAACC 
AATCTGTGCG TCTGGGGAAA GAGACAGTGC TTCGAGTCTG CCGCGCCGTT TAAAGGTGGG 
AGCCTTTCTC ATTGTATAGT GCAGGAAGCA TTGTGACAAG CAATGTAAAG TATTTGTCAA 
GAACATTTGT GAATATTAAA TACAGTCTGT ATTGCCTGTC T 

 

Protein sequence

MAPSVTRSAE GVVLDDKKNW VVGKKIGSGV QGTVHEVLAN GAVSEFAVKL APVPTVKTKG 
RQLSPAQQNA NAIYRESVVY QNALGSLKGT FIPKVASPQA FKEVSGFNCL FLERMDLPLE 
NIVPLLVKRP KIDLGPVALQ LLNILQAVHA QCHFLTDVKL ENFMLARASK VSSTLEARIR 
VIDLAMAEPS KMVGGKLQNV TKPEMAGTPL YASLHVHALQ THSFRDDVES VLYVLAELVI 
RTQATQEGTL RRYEATRGTD VPTFLPWSHG ASTEQIGELK KRLVTDPKSE FYQRMPPSIA 
KSIRDALHIV WECEFNEHPD WSALEHVLHK LVFPKTVPKS QAAGTAKAPP VSKSKNSLKV 
SHRDQLEDAR RRAREYMGAP EIQSQASKVV SRTSERAQRA AKRSSLESRA SPKHRPPSSR 
YFLDSNSDEG SPGRLSPAEP AVDVDGDVSM DDAKDYESDD ETFYTTHDPL NSSLGSPAMM 
SVASVQEETM ELASDENQKP GLLTVWLKVT AGPSRGRKIC LTEGSSEVIT IGSKPNTKGE 
SFRLGPDVEA NHARFTLQVQ RSKRAGVSFK VQVDDLKTSS GVTILEHRIS KGKSGWVFAN 
QSVRLGKETV LRVCRAV