| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47929 |
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| Symbol | |
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| ID | 7203122 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011683 |
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| Strand | - |
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| Start bp | 454678 |
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| End bp | 458866 |
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| Gene Length | 4189 bp |
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| Protein Length | 1272 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182398 |
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| Protein GI | 219124201 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTTGAACAAG GGTCTCGCTC TCGAAAACAG TCGAAGATAC GCTAACACAG ATACTATTGA
TGGCTAGATA GTAGGCATCT GAGGAGCAGT ACGAAACGAG CAAGCAAAAA AACATACCAA
TACACGATGG AAGGCGACGG TGTGTCTCCT TCGACAGCAG GTTTGGTCGT TTCCCACCAC
GACAACGGAA GCGAGAGTGA CGACGTAGTG CCAACGCAGG CCGATCCCGA ACACGACATA
TCCGTAGAGA TCGAAGGCGA CGAAAAGAAG AAGATTGGCA GGACCACGTC GGTGACAGCG
TCGTCACCTT GCGCAACTCG AGACAATGTG GGGGACGACG TTTTGAGGGG ACCCGATTTA
AACGAATCCA AGACGTCTTT GGATTCCAAG TTATATCGCC AAATTCTACT ACCTAATGGC
TTGCGTGCAG TCTTGATCCA AGATACCATC GCCATGCATC AAAACTCCCG TTACGAGTTG
GGCGGGTCGG ATGAGGAGGA GGACGACAAC GACATTGACG ATGCAACTGC CGATCAAGCT
ACACCTGCCT CCACCCGCTT GCACCATTCG CGCCACGGAA GGAGCGCCAC GGAATCCGAC
GACGATAGTG ACGTTGACGA TAATGATGAC GACGATACGG GTTTGCGTGA CGCCGCCGCA
TCCATTCTCG TCGGTGTTGG GTCCATGTAC GATCCTGTCA CCTGCCAAGG TCTCGCTCAT
TTTCTCGAAC ATTTACTCTT CATGGGATCC GAAAAATATC CCGGAGAAAA CGAATACGAA
TCCTTTGTCG CGAAACACGG TGGAACAGAC AACGCTTGGA CAGAATGGGA GTATACCACG
TATACGGTTT CGATTCCGCA AGAATACCTT TGGGAAGCCA TGGATCGCTT GGCGCAGTTC
TTTGTGGCAC CACTCTTGTT AGAATCAGCC GTCGATCGGG AATTGAATTC TATTGAATCC
GAGTTTCAAC TCAACAAAAA TTCCGACTCG TGTCGGTGGC AACAGCTCTT GTGCGCCACG
TCTCGTCCCG ATCATCCCAT GGCCAAGTTC AGCTGGGGCA ATCTGCGCTC TTTGAGGGAG
ATCCCCCAAG CGCTCGGCGT CGACCCACTC GTTGAATTGC GACGTTTTTA CAATCAATAT
TACTACGCTG CCAATATGAG GGTTTGCGTT ATTGGAGCGT ACACGCTAGA CGAAATGGAA
CAACGCGTAC AATCTATGTT TGCGAAAGTG CCAGCTTTGC CTCGCACGCC CGGGCCCCTA
GCGCTACCGC TCAAGCCAGA AACAGGATTA TGTTCCTGGC AAGCCGAATA TCATAGTCCC
TTGCGAGAGG TCGGTTGCCC TTTGGCGGAG CATGCTTTAC AGAAGATTTT TCGGATCGTT
CCCGTCAAAG ACAAACACGC GCTGTCCATT ACTTGGCCCT TTCCAGGACA AATGGATCAG
TGGCGAACCA AGCCGGGCGA CTTCTTGGCG CATTTATTGG GACACGAAGC AAGTGGTTCG
CTGCTCTCAT ACTTTCGATC CCAGTCTTGG GCGACTAGTT GCATGGCTGG TGTGGGCGAA
GAAGGTAGTG AAAGAGCGAG CAGCCACGCC TTATTCAATA TGTCCTTCGC GCTCTCGAAA
GAAGGCCTGG AGCATTGGAG AGACATGGTT GCTGCTGTTT ACGAGTACAT AGGTATGTTG
CGTTTCAAGT CCGAGCATGG TTGGCCGGAA TGGATTTTCG ATGAGTTGCG CAGCATTCAC
GAAGTATCTT ATCGCTATGG TGACGAGGCC TCACCGGAAG ATATTGTTGA AGCCATGACG
GAAAGCATGG CGCCACACTA CCGATTGCCA CCTGAGCGTT TGCTGGATGG TCCACATCTA
CTGTTTGGAT TTGACGCGGC GGCAATTTCT TCCCTGTTGG ATTGCATGAC TCCTCAAAAT
GCACGTATCG ATTTGACGTC ATCGTCGTTT GGACGGCCAG CAGATTTCGG TGTTGTGATT
GCGGAAGATT CCACCGACAC TCTTGTTACG GATCTTCAGA TCGCCGATGA GATGGAGCTA
TTCGATGCGT CGGTAGCTGG TCCGCCTCAA ATTGAGCCCA TGTTTGGTAC ATTTTTTTGG
TGTTCTGATG TTCCCTCTGA CTGGATTGTG GATTGGTGCT CGTTGGCGCG ACCGCAAGAG
CCTACTTTGC GCATTGGTTT GCCGCCACGC AATCCGTTTG TTCCAGAAAA GTTTAATCTC
AAACCCTTGC CTTCCGATGA TGCTCGACAT CCTTTGCTGA ACTCTTCATT AAAGCTTTGT
ATTGCTGTTG GCAAATCGAA GCAATGGTTC CCGGCGACAG TTGTTCAGTA CAATGAAAAG
AAGAATGCTT TGCTACTGTC TTACGAAGAC GAAGATGAAC AATGGCATGT CTTGGATCGA
CATATTGAGA CGTTTCCTCC TGATCAGATT ACTCCCGACT TTGAAGGAAC AATGGACGAG
AAGAAGGTCA AGTATCGCAT CGTGGCGCTC GCACAGCCAG GCATGGGTCC GTTGCGAAAA
TTTGCCGACG ACAGTGATTT TGCCGCCGAG AATGGCACAG CCTTCCCCCC CATTCCACCG
GCGTTACCAC CTTCTAGACT ACCCAAACAG ATATGCAACT CGAACTTGCT CAAAATGTGG
TATCTGCAAG ATCGAAGCTT CCATCGACCT ATTGCTGAGC TACGTCTAGA AATTATTTGC
GGAAAAGCGA ATAGTTCGCC GCTGCACAAG GCTTGTGCCG AATTGCTGGT CGAGCTCTGC
GTTGACAATT GCCTGGAAAT GACTTATTTG GCTAGTGTCT GTGAACTGGG CTCGTTATTG
GTCGCGACTG ATGTGGGTTT CTATTTACGC TTCCATGGGT TTGACAACAA GCTTTCGGAT
CTGTTCGAAA GGTGCATAAT TGTTTTCCTG AGTTTTCGGC AGGAAGTGGA TACCTTGCCG
TCCGGTATTG ACGGATCAAG ATTTAGGGCT TGCTTGGAAG TTCTTCGTCG AAGATATCGC
AACCAGGACA TGTCCGCTTC ACACCTTGCC GGAAACTTGC GACTCCGTGC TTTGCGACCG
AGCATCTGGT CGGCGAACAA AAAATTGCAT TCAATCAAAG ACCTTTGTGT TCCTTTATTC
GCAAAAACGG TTTCAGAAGT CTTGGCCGAT TTTGCCACTG AATGTCTCCT CCACGGTAAC
ATAGACCTTT CAGATGCAGA CCGCACGAAA AAGATGATCA TTTCGCTTGT TGGAAACGCT
AGGTGGCAAG GGTCTTCCAC GTAAAAAGTA TCCAGCCCAG TCGATGATCC GCATTCCGTC
GGTTGACAAA CCAGTTTCCC TTATTGCCCC TTCAAAGGAT CCTGGGGAAC CAAACACGGC
AGTGGAAGTC TATGTACAGG TGAACAAGGA CAATCTGCAC GAACGTGTTT TGATTGATCT
TCTTGTACAC ATAATTGATG AGCCGATTTA CGACCAGGTA AGGGAGCCCC TTGATGCACG
AATAAAGAAT CAAAGTGCAT ACACTGGACT CACTCTATTT TGTCTTTCCT ATTCAGATCC
GGACGAAAGA CCAATTTGAA TATGATGTAC ACTGTGATAT TAGATGGTCG TACGGTATTA
TGGGAATTGT ATTCAAAATT GTAACAAACG TGAAGAGTGC ATCTGCAGCT GTCGAACGCA
TTGACAAGTT CTTGTCGGAC TTCCGTGTAG ATCTTGAGAC AATGTCGGCA GCCGAATTCT
TGGAGCACCT GGTGGGGCTT TCAACTCAAA AGCTGGACAT GTTCAACTCT CTGTCCGAAC
AATGCGATCA CTACTGGTGT GAAATTAGGG ACGGGCGATT TGAGTGGGAA GCATATCGGG
ACGAAGCAAT TTGCCTTCGA AGCGTGCAGA AAGGCGAACT TCTCAAAGCT TTCGACAAAT
GGTTGAACCC AGCTAGCCGT CGCAATGTTA TTGCAATTCA AGTGATCGGG ACCGGAGAGG
GCGATGTGTC AATCGGTCGG CCTTCTCTCG AAAGTGACAA AGTCGATGAT TACTTGGACG
CAGTGTCATC AGACTTTCAC ATTCTCTGCA AAGCGCAAAC GTGGGGCCGA GTGAACTCGA
AGCTCTTTTG AGCGTGTATA TTGCTACAAA TGACCAAGTG GTGCGGCCAC TTTCATAGAA
TATTTGTCTT CTAAAGTCCT ACCTAGCTAG CTGACTATCA ATGCGAGCG
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| Protein sequence | MEGDGVSPST AGLVVSHHDN GSESDDVVPT QADPEHDISV EIEGDEKKKI GRTTSVTASS
PCATRDNVGD DVLRGPDLNE SKTSLDSKLY RQILLPNGLR AVLIQDTIAM HQNSRYELGG
SDEEEDDNDI DDATADQATP ASTRLHHSRH GRSATESDDD SDVDDNDDDD TGLRDAAASI
LVGVGSMYDP VTCQGLAHFL EHLLFMGSEK YPGENEYESF VAKHGGTDNA WTEWEYTTYT
VSIPQEYLWE AMDRLAQFFV APLLLESAVD RELNSIESEF QLNKNSDSCR WQQLLCATSR
PDHPMAKFSW GNLRSLREIP QALGVDPLVE LRRFYNQYYY AANMRVCVIG AYTLDEMEQR
VQSMFAKVPA LPRTPGPLAL PLKPETGLCS WQAEYHSPLR EVGCPLAEHA LQKIFRIVPV
KDKHALSITW PFPGQMDQWR TKPGDFLAHL LGHEASGSLL SYFRSQSWAT SCMAGVGEEG
SERASSHALF NMSFALSKEG LEHWRDMVAA VYEYIGMLRF KSEHGWPEWI FDELRSIHEV
SYRYGDEASP EDIVEAMTES MAPHYRLPPE RLLDGPHLLF GFDAAAISSL LDCMTPQNAR
IDLTSSSFGR PADFGVVIAE DSTDTLVTDL QIADEMELFD ASVAGPPQIE PMFGTFFWCS
DVPSDWIVDW CSLARPQEPT LRIGLPPRNP FVPEKFNLKP LPSDDARHPL LNSSLKLCIA
VGKSKQWFPA TVVQYNEKKN ALLLSYEDED EQWHVLDRHI ETFPPDQITP DFEGTMDEKK
VKYRIVALAQ PGMGPLRKFA DDSDFAAENG TAFPPIPPAL PPSRLPKQIC NSNLLKMWYL
QDRSFHRPIA ELRLEIICGK ANSSPLHKAC AELLVELCVD NCLEMTYLAS VCELGSLLVA
TDVGFYLRFH GFDNKLSDLF ERCIIVFLSF RQEVDTLPSG IDGSRFRACL EVLRRRYRNQ
DMSASHLAGN LRLRALRPSI WSANKKLHSI KDLCVPLFAK TVSEVLADFA TECLLHGGKG
LPRKKYPAQS MIRIPSVDKP VSLIAPSKDP GEPNTAVEVY VQVNKDNLHE RVLIDLLVHI
IDEPIYDQIR TKDQFEYDVH CDIRWSYGIM GIVFKIVTNV KSASAAVERI DKFLSDFRVD
LETMSAAEFL EHLVGLSTQK LDMFNSLSEQ CDHYWCEIRD GRFEWEAYRD EAICLRSVQK
GELLKAFDKW LNPASRRNVI AIQVIGTGEG DVSIGRPSLE SDKVDDYLDA VSSDFHILCK
AQTWGRVNSK LF
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