| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47913 |
|---|
| Symbol | |
|---|
| ID | 7203174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011683 |
|---|
| Strand | - |
|---|
| Start bp | 417262 |
|---|
| End bp | 418453 |
|---|
| Gene Length | 1192 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182389 |
|---|
| Protein GI | 219124182 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTTCTAGGCA TCTCTAGAAG GAGCCCTTTG TTCTTTAAAT TATTGTGTAC TATCCCCTCT
AGTCGCCACC CCTATTATTC CTGCTAGCGC ACTTTTTCAG TTCACTTTAC TGTTAAAGCG
AGTGCCTTAG GCCAACAAGT AGAGCCCGCG CAACGCAGTG GTCGTATTCA ACTCTGTTTT
TGCTCCATTG ATTTGGTTCT ATACTGGCAT TTTGCTTATC GCTATGTCTC GTCTTGGATT
TTCGTGTAAT GAGCGTGATG TGCTAATGGG TCGTGGTAAG CGAGTTTCGG AATGGCCGGG
CAACATTTAT TTTCGTCAAG TTGTGAACAA ATACCGCGAG CGATACGCGA AATCTGCACG
GACTGTGAAA GTCACCATTG CGCAAACAGT AATTGACGAA ATCCACCAAG TGAACGGTCG
ATTCTTGAAA GAGGAAAGAG ACGGTAGCTG GAACGAAGTT GAAGCGGACA GGACAGTGGA
AAAAACCTGC CAGGCGCTCC GCGAGAAAGA GAAGTCGAAT CCGGCCCCGA TGAGCCCTTT
CGTGGACACT GCTGGTCATC CTCAGCGCAA AAGAGCCAAG CTGCAGCCAG CGCTCAAGAG
ACCTCCTTCG TCCGACGAAA ACTCGGTTGA AAGTATTGGG GACGACACGG CAACCGAGTC
AGACGAAAGC AGCGAAGACG AAACGGAGAC GGAAAGTGAG GAAGAAGAGG TCAATGTGTG
CCCCCCAAAA CGAGCTGCAT CGAAAGGTCC AACGCCTCTT TCAACTGTGA AGCAAAAACC
TAATGAAGAA TGGCTGGAAC AAGTCCAGAA GTATGCTATT AAATATAAAC ACCTAGCCGT
CCCTCCTGGA TGGTCGGAAA ACGTCAAGTT TGCCGATTGG TGTGTTGGTA TGAGGCTTCT
CAGACGTGAA CTTGACTTGG GATACAGGAG AGTAAGCACG GCCGAAAGAG ATATTTTGGG
GGATCTGGAG GAAAGGGGTT TTGTCTGGGA TTATGAAGCC TGGCACTGGG AGAAGCGATA
CAAAGAGCTG CAAGAAACTT TGAACATGGG GCCACACGAA AATCTGAAAG ACACTACTTT
GCATTGGTTG GACAACCAAA GGCGACTCGG CCGAGCAAGC ATCCCAACCG ATCGACTAGA
AAAATTGCAG AAGTTAGGAA TATACCTTTA AATGCGGCAA ACGTTATACG AC
|
|---|
| Protein sequence | MSRLGFSCNE RDVLMGRGKR VSEWPGNIYF RQVVNKYRER YAKSARTVKV TIAQTVIDEI
HQVNGRFLKE ERDGSWNEVE ADRTVEKTCQ ALREKEKSNP APMSPFVDTA GHPQRKRAKL
QPALKRPPSS DENSVESIGD DTATESDESS EDETETESEE EEVNVCPPKR AASKGPTPLS
TVKQKPNEEW LEQVQKYAIK YKHLAVPPGW SENVKFADWC VGMRLLRREL DLGYRRVSTA
ERDILGDLEE RGFVWDYEAW HWEKRYKELQ ETLNMGPHEN LKDTTLHWLD NQRRLGRASI
PTDRLEKLQK LGIYL
|
|---|
| |