Gene PHATRDRAFT_47903 details

Gene Information

• Locus tag: PHATRDRAFT_47903
• ID: 7203167
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: +
• Start bp: 392759
• End bp: 395420
• Gene Length: 2662 bp
• Protein Length: 858 aa
• GC content: 45%
• Product: predicted protein
• Protein accession: XP_002182216
• Protein GI: 219123822

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.113318
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCTTCTTGTC ATGAAATGAT CCATCCCAAG ATTGTCCATC CTTGCTTTGT TGACTCCAGA 
GCCCTTTTTA GAGAAAGACA TTATCATGGA AGTGGTTACT CTGCCGAGAC GCGGTAGTAG 
TGTATACGCT CGGTCCAACA GTGATGAATT GGACGACAAT ATTGGTCCAT GCACACGCAT 
TATTCCTGGA AGTCGAATGC TTGACTGGTT TCATATTGAG AAACCAGTGA AACAACGTGA 
CAGTGTCTTC CTAGAGACAG ACACAGAGAC GATGACCCAA GTGTTGCTTG AAATTGTTGG 
TGCCATGGGA CTTTCTACAA AGCTTAAAGT GGAAATTGAT CCCTACTGTA TTGTTTCAAA 
AGAAGAAAGA GAAATTCATC GCACAAAAAA GATTGTCAAC GATGCGAATC CTATCTGGAC 
GGTAGAGACG AATTCGCTTT GTGTTGTGGA AGTGAGCAGT CCGAACGATA CCCTTACAAT 
TCGTCTGTAC GATGGATCGA CGATACTCGG TGTTACCAAT TTGAGCTCGG CAATTGCAGT 
CAAATCTCTG AACGGAATGA AGCTACTCGG GACTGTAACT CTATCTTGCG AAGAACTGCT 
TAGAGGTAAA GGGGATCGCA AGGAATTTGT TATTAAGCCA GAAAATTCCA AAGTTAGCAT 
GCATAAGGGT GTCTTGGCTA TGCGCTTTCG ACGTGCGTCG CGTTCAGATC TCGAATTCTT 
GGGGAAAATT CCAACCCAAA CCGCTGCGGA AGAGACGGGG TTGGCCTCCG ATATCGATTT 
TAGAAACGTG TTACGGAACA GTTTTTTTCA GTCAGCTCAA CGGAAAGGGA AGATGGGAGA 
AACTTTACAC CGTGTCAAGC CTTTTCCTGA CCCAGATTGT ATTGAAGAAA CCACATGGAT 
GACGGTCGAG TCCCTTCAGA AGGAAGCCTT AAAGCCGTCG ACCAAATGGG TCAGTGCTGG 
CTTCGGATCA ATGGGCGTTG TGCATGTAGA AATCATTGGC GCGGACAATT TGCCAAAGCT 
CGACATAAAT TTGAATGATT TGACGGATCC GTTCGTTGCA ATCGCTTTTG AAGACACCAT 
AGTTCGGACG GACGTTATAT GGGACGACTT GAATCCTCGT TGGATGCCAT GGTCGACGCG 
AGCCTTCTGT TTTCATGTAC GGCACCCTAC ATCAATTCTT CAAGTAGGCG TCTTCGACTT 
TGATGACGGT CCACTTGATT ACTTTGATCC AGTGGGTCGT ATCGTCATTA ATACTATCAA 
CTTCGACTCG GACACGACTT ACCTCTTGAA ATACAACCTT CATCACGATC CGAGGCAAGC 
GGACGACGCA CCTCGAGGAA CTCTCACAAT TCGCTTGCGC ATTGAGTGGG ATGATGAAAG 
TGAGGCTATG AAAATGTCTT TTATTAGCCC GCCTCGTTTT ATCATTAATG TCGAGACCGA 
TAAAGCGTAT CAAGTTCTCT GCTACTTGAC TAGAGGAGCT GTGGATATGG AAAAGGCATC 
TGTGGCTTCG GTTAAGCTAT ACGCCAATGA ATTGATTTCG TACTGGAAGA GCTATTGCTA 
TGTCTTAGAC GTCCTGTTCG AAGTTGTATT GTGGCGAGGC CGCTTAACAA TTGGAGAGAA 
TCGAACAGTT TGGTTCCCTA TCCACTCCTT GTTCCTCTTC ACAGCGACGA CAATTGCAAT 
TGAGCGGCCT ACTTGGGTCG TTCCTATTTT TCTCTATACA ATATCATGGA CAATGCTATC 
GATCAATTTC TACGCCAGTC GCCATCCCTA CCCATGGAAG CGCGTCAAGT CTTGTGAACA 
GACAAATATG GTTGTCTTGC TGGGACGGTC GGTTCACGCG CCGGTGAAGA TATCGCCTAA 
CCAAGGTGTA CGCGAAGGTG ACATGATTGA CAGACTTGAC GATGCCAAAG CCAAACGAAT 
GTCGGCTCTA ATCAGTGGGA CTCTTTTTTT TATGGTTAAG ATCTACGGCA TTTACAGCAA 
GACAAGCGAA ACGAGCCAAA AGATAACGAC TGAAAAATAT CATTGGTCAT TGTTGAACGG 
TCGCCTATAC TACCTGCACA TTTTGTTGAA ATCTTTGTGT ACGTACATCC GAATAATTCG 
AAACCTTGTC AACTGGAAGG GATATATATC CAACAAATTG ACAATGAACT GCGTTTTGTT 
GGCGACAATC TGGGTGGTGT TTCCAGTCCA TACCTTCATG CTCTGGATGC TGCGAATATT 
GGCTTGGAGC TTTCTTGGCC CTTGGATGAA AGCTGTTGAT GTTCTGTACG TCCACAAATG 
GTATAAGACT AAAGAGGAAC TCCTTAGCGA GGTTGATGGA GGAAATGATG CTGTACCAAA 
TCTTCCTGAC TTTGATGCAA TCATTGAGAG CGAAATCTTC TTAAACATGG GGAAGTCTGG 
ACGTATTGTT GCTGAGAACA ATCTGAAGCT CAAGGCTATG AGAGAAAAAA TGTTCGGCAA 
GTACAGTGAA CGTATTCCGG CTTCCGATTC CTCCCGCTTC CCAAGTGTCC CCCTTCCCGA 
ATCGACCGCG GAACCTTACC AAGGCAAATC CTGGGGGGCT CCTAAATTTT GGTACCACGT 
TCCGGGCCAG CGATTAACGG GAAATATGAT ATTGGAACGC TCCAAAGATC AATACTTTGA 
TCTGAGTAGT TCGATCGTCT AG 

 

Protein sequence

MEVVTLPRRG SSVYARSNSD ELDDNIGPCT RIIPGSRMLD WFHIEKPVKQ RDSVFLETDT 
ETMTQVLLEI VGAMGLSTKL KVEIDPYCIV SKEEREIHRT KKIVNDANPI WTVETNSLCV 
VEVSSPNDTL TIRLYDGSTI LGVTNLSSAI AVKSLNGMKL LGTVTLSCEE LLRGKGDRKE 
FVIKPENSKV SMHKGVLAMR FRRASRSDLE FLGKIPTQTA AEETGLASDI DFRNVLRNSF 
FQSAQRKGKM GETLHRVKPF PDPDCIEETT WMTVESLQKE ALKPSTKWVS AGFGSMGVVH 
VEIIGADNLP KLDINLNDLT DPFVAIAFED TIVRTDVIWD DLNPRWMPWS TRAFCFHVRH 
PTSILQVGVF DFDDGPLDYF DPVGRIVINT INFDSDTTYL LKYNLHHDPR QADDAPRGTL 
TIRLRIEWDD ESEAMKMSFI SPPRFIINVE TDKAYQVLCY LTRGAVDMEK ASVASVKLYA 
NELISYWKSY CYVLDVLFEV VLWRGRLTIG ENRTVWFPIH SLFLFTATTI AIERPTWVVP 
IFLYTISWTM LSINFYASRH PYPWKRVKSC EQTNMVVLLG RSVHAPVKIS PNQGVREGDM 
IDRLDDAKAK RMSALISGTL FFMVKIYGIY SKTSETSQKI TTEKYHWSLL NGRLYYLHIL 
LKSLCTYIRI IRNLVNWKGY ISNKLTMNCV LLATIWVVFP VHTFMLWMLR ILAWSFLGPW 
MKAVDVLYVH KWYKTKEELL SEVDGGNDAV PNLPDFDAII ESEIFLNMGK SGRIVAENNL 
KLKAMREKMF GKYSERIPAS DSSRFPSVPL PESTAEPYQG KSWGAPKFWY HVPGQRLTGN 
MILERSKDQY FDLSSSIV