| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47896 |
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| Symbol | |
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| ID | 7203162 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011683 |
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| Strand | + |
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| Start bp | 377288 |
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| End bp | 381995 |
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| Gene Length | 4708 bp |
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| Protein Length | 1543 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182211 |
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| Protein GI | 219123812 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGCGT CGGCCCCTAA AGTGAAGGCC TACTTGGCTA GTCTGAAAGG AAGCGTTATA
GATTCCGAAA AACCAGACTT TATACTCTGT TATACAGCGC TTCTCAAACT TGAACTGCTT
CATAGGGGAG TATTGCTCGA CTCAACAAAT GATCTATCCA AAACGCTGGA CTCCGTGACG
GTCACGGCCG GGAAAGCACT GCTAGACTCA TCTATCGCAT CCATGCCGAA AACACTCTTA
TCGGGTATTT CGGCATTCGC TGGCAGAATA GCTGAAAATG TGAATACTGC TGTGATGGAT
TCAGGGACAT ATTTAAATGA GTTATCTGAG CTGGACGGGG AACGTAGTCA ATCCGCACGC
CAACGTTGTC GCGATGTGGG CGATAAACGA CTTTACGCAA TCTTACTCAT CGCTAGCGAG
AGAAAGCTAC TAACGAATGT CCAACTCTCT GAGCGATTAT TGTTTCTCGC AGAAGGTTAC
TACTATCATG CCGCAAGTTT GCAACCAGAT GCTCCTATTA TGTGGAAAAG GGCCTGGGAT
ACCATCGTTG AAAGACAAAA GATTAATGGC AAGAATGATG AAAACTCCTG GGAGGCGACA
TTTTCACTTC AAAATCTACG CCGTATCGCC TCATACAAAG GGAACGGTAA GCGCGCGGCA
GAATTGGGTT TAGCTCTCGT GCAGAGTCTC CTCAATTCTG TTGACTGTAC CGAAAGCAAC
GTATCTCTCA AGGGCCTTCT CGAATCATTT GTGCAGCCTT ATCGGGAACT GGAACCAATG
AAACGCAAGT ATGCAAACAA GATGGCTGCT GATACTGTAG AGTCCATATC TGAGGAAAGT
CTATCAGAAC TGGACCTTTT TCTTCTAAAA CAACTGTCTC TAAGGGTTTG CTTGTCTGGC
GAAGATTGGG CAATTGAACA AATAGCAGAG GACGAAATCA AGCAACGAGA GAATCGTAAA
CCCCTTGAAG CAGTAATCAA ACCCTTATCT TTGGAAGCTG TACGTGGCCT TGTAAGAAAG
GATTATTTGG CGAACCAAGA TTCTTTCTCT GAGAAGATGG ATAAGTTTGC AAATGCTCTA
CGCGACGCTG TCTTACTGAA TTTTGCAGAT TCTAAAGCAC GCATTAATGG CTGTATTGAC
CTATTGAAGT ATTTGTCGCG GATGAAGGAC AAGTACCAGG CTAGAGCTTA TACATTGGCA
TTAGGCTCGA CAGAACGATG TGTTACATTG GAAGATATCG CGAACTTCGT TAAGCCTATC
TTGTACGCCT TGCGAGAACG AGCCGCTTGG AGTGGAATCG ATGAGAGTGC GGAAGAAAGG
ATACATAGGT TAGAGAAATG CTTCAATGAT GTGTCCGTAG AAGAATTGGG ATATATCGAG
GCATGCGCTT TGATAGTCCC ATTTTTAGAA TGGAAATTTT CTTGCTCAGA TTCTGTTGTG
ATGCTATTTG ACATGGAATC TCATTGCTTT GTTCAAGAAC TTCTTTGGAT GCTTCGTAGA
AAATGGAAGG CTGTCGCCGA ACATTCCCAG ACGACTGCTA CAGTGAAGAA TCAAGTAGAT
AAAACGGATC GACGCATTCA AAAGATCGAC TTGGCACTTT TGTCGACGAT GGCTCTCCTC
GCTCTGGGGT TGCCTTCAGG TTCCACCTCT GATGTTCGAC GTGTGACGGA TGCGGCAATC
TCTTTTTCAA TCAAAGATGT CAGCCAATAT TCAAGTGAGA GTGGTGGTCC GTTTCTCTCT
TTCCTTGTCG CCTGGAATGG TCTATCTCGA TCGCCCTGGC AATTTTGCGG AGTTGCCGAA
GCTCGCCGAA TACTAGTCGG TGCAAGAGCG TGCTTACTGA AGTCGGCAAG AGCTTGCGGT
CAAACATTCT TGTCGGTTGG TTCACTGCTC CTTGACATCG CCAAGGCAGA TGCGGAAATG
CTGTCTATTG GAGGAGGGTT GACTCATGAA GTGCCACTCC TTTACAGAGC CGTAATGACG
GCAGCAAAGG ACACTGGGAG AATGGCGGAC AACTTAGAAC TTATACTGCA ATCACATATT
TTCTCGGGTT GGGGGAGGTT ACTTATCAGA GAACCAGCCC TGCAGTTTGA GGCAGTCAAT
GCGCAAGAGA ATGTAGTAGA CGTATTGAAA GGGTACTTGA TTGCTTTGCA AAGAATGGAC
TGTGAAGGCT CTTTTTACTT GTGGCGCTCT CCAAGCGCAG TGAGGAACGC GGCCTGCTAT
CAAATTGCGG CTGCGAGGCA GAGAATTGCT GATCTGCTGC TTCACAAGGG TGAGCTAGAG
GAGGCGCAGT TTTTTCTTCA AGACGCGGTA AACGATGCGC CTGAAGATCA AAATGCATGC
TTTTCTTTGG GTGTTTTTCA ACTTCGACTG ATGTGTTGTG AACAATCGCG ATTGCCTGTC
GATGAAAAAG CGGCACAGAT GCACCTTCTA CGAGCTGCCA AACTAGATTC GAGTCGTCCC
GATCCCTTCG CCTTGCTAGG ATATTGGTAT GAAGAGTCGA ACGATTACAA ACGGGCTGCT
GGATGCTATT CGAAGGCTTT GCTTCTTGAC CCTTCGCATC CAGTAGCTGG TCGTGGTTTA
TTAAGACTGA AAGCTGGAAA CCTACTGGGT GTGCTTGAGA AGGCAATTGA TAGGGGCTCC
ACGCTCAGCG GATGGGCATG GTTGGCGCTT GCGACCCACA AAGCCAACGT ATTGGGCGAC
GACGAGCTTG CCGTAGTGTC TCTCGTGAAT GCTCTGCGTT GCCGCGACAT TCTGAACCCT
GAATCTGAGC CTCTTGCTTT CTGCTATTAT GACCCATTAG GCCCACGTGA CTCTAGCTGC
AGCGATCACG CTACGGCTTT GTGCGCTTTA GGTTCTAGCT ACGAGCGCCT TGGTCGCTAT
ACTGCCGCGC TTCGGTCATT TCATTCTGCT ATTGACGAAT CGTCTCTACA CGTCACCACA
GCATCTCTCA TTTCGTGTGC GCAAGGTAAG CTGGGAACCT ATAGTATAGG CCGAATTTCT
CCAAATTTCA TGGCTTAAAA AGTGTCTTCC TATGTTTGTA GTCGAGATTA AACTTGGGTT
ATTTGAAGAC GCCGCAGAAC GACTGACAAC AGTCGTATCT ACGGAGAACA AGGACGAGCG
ACTTGTTGCT GCGCAAAACC TTGGTATAGC TCTGCATGCA CTTGCCCAAC GGGATCTCCA
TGATGGAAAG GCTGGTGCAG CTCTTTCGCA TATTGTCCGA GGCATAGAGT TCTTGCAGTC
ACAATTGGAA TCTCATGTCT GTCTACAAAA ACTGATCGGG GATCTTTACA CCTATGCGGC
TGTGTTGCCT CCCGACCTAT TTGAATCGAC CTTCAGCAAC AGCTCATCGA TTAGCCCCAA
TGGTCAGTTG AGCCCGCATT ATCAATTTAT TGCCGCTGGA GAAGAATTTT ACAATATTGC
AATATCAAAC GCCACGGACC TTTTCAAAGA AGGCGATGAA TTGAAGCATT TGCAGGCCAG
CCTGATAAGT GACCTTGGTT GTAATATTCT TCTCCAGGCT CAATCATGCT TTTCAGCCCA
TGTACACGGC GTTACATCTC CTTCAAGAAA GGAGGTCTTA CTCACCTCTG CAGCGACTAA
GTTTAAAAGT GCTCTGGAAA TTGACCCTCT ACATTCTCCA GCTTGGTGTG GACTTGGATG
TGCGTTAGCC GTAAGCGATC CCCTTCTTGC ACAGCACGCC TTTTCACGTG CAATCGAACT
GGACAAGGTC AGTCCCGATG CGTACGCGAA CCTCGGTTTC TTGTACACAT CTAATGCCAG
ATTAGCCGCG AGCGCCGGGG TCTCTGATGC GTTGACCGAA GTAGCAGACA CACCCATGAT
GTGGATCAAC CGAGCTATAG TTCTTGAGTA CCAGGCTCGG CAATCTCACC AGCAAGAGGA
AGAACAACAA TACCGTGGCT ATATTCGGGA AGCTTCAAAT GCTTACCTTG CGTCAATGCA
AGTAGTGAAG CGGCCTGCTG CTGTCCTTGG TATGTCTCTG TTGTCCCGTA TCGACTGGGG
GAATCCCGAG GCACCATACG CCCAGCGCGA AAGCTCCTAT TACCTCGATG AGTATTTGGC
CTCCGTTGGT CCAGCCGACT TGCCTGCTAA AATACTACAA AGAGTGGCCT TTTTGGAGAA
GTCAGCTTCG AGCCATCGAA GCACTTCTCC AGCTGAGCTA TCGGCGATGA TCTCCGGTGT
TACAGATGCC ACCAGCGATC TCAAGGCAAT TGGTATAGGT AGTGAAGCCG GACAAGGTCT
TGACCTGGAT TTGATCAGCG GAATAGGAGC AGACGTGGCG ACTGAACATT CAGAAGAAGG
CACAGCCTGT GAATTGTCGT TGCCTATACC AATTGGTCGT CGCCTGATGC TGACACCACG
GGATGGCTCC GTGTGGTTGG AACTTTCCAA AGAGTTGGTG TTTGCTTTGA GTAACGACTC
ACCAGACTGC TCCTTTGATG CTGCCCGATC TGCTGCCGTG CAGTCACTCA ACATTCTGAT
GAGAAGCGTG TTCCACACTT CCTATGTCAT GAGCAAACCA GCAAAGTACA AGGCTGCCGA
CGTTTCGGAC GCTCTGTCCC TTGCCCACGT ACTGAAGAAT AAGGCTCAGA ACGAGTGGTA
TTCATCAAGC GGTCACGACT TTGATCTTCA GCGAGCACTC ATTTTATGCC CCACCAACAA
AGTTGCCAGA GCAGCGCTGA CCAATTAG
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| Protein sequence | MLASAPKVKA YLASLKGSVI DSEKPDFILC YTALLKLELL HRGVLLDSTN DLSKTLDSVT
VTAGKALLDS SIASMPKTLL SGISAFAGRI AENVNTAVMD SGTYLNELSE LDGERSQSAR
QRCRDVGDKR LYAILLIASE RKLLTNVQLS ERLLFLAEGY YYHAASLQPD APIMWKRAWD
TIVERQKING KNDENSWEAT FSLQNLRRIA SYKGNGKRAA ELGLALVQSL LNSVDCTESN
VSLKGLLESF VQPYRELEPM KRKYANKMAA DTVESISEES LSELDLFLLK QLSLRVCLSG
EDWAIEQIAE DEIKQRENRK PLEAVIKPLS LEAVRGLVRK DYLANQDSFS EKMDKFANAL
RDAVLLNFAD SKARINGCID LLKYLSRMKD KYQARAYTLA LGSTERCVTL EDIANFVKPI
LYALRERAAW SGIDESAEER IHRLEKCFND VSVEELGYIE ACALIVPFLE WKFSCSDSVV
MLFDMESHCF VQELLWMLRR KWKAVAEHSQ TTATVKNQVD KTDRRIQKID LALLSTMALL
ALGLPSGSTS DVRRVTDAAI SFSIKDVSQY SSESGGPFLS FLVAWNGLSR SPWQFCGVAE
ARRILVGARA CLLKSARACG QTFLSVGSLL LDIAKADAEM LSIGGGLTHE VPLLYRAVMT
AAKDTGRMAD NLELILQSHI FSGWGRLLIR EPALQFEAVN AQENVVDVLK GYLIALQRMD
CEGSFYLWRS PSAVRNAACY QIAAARQRIA DLLLHKGELE EAQFFLQDAV NDAPEDQNAC
FSLGVFQLRL MCCEQSRLPV DEKAAQMHLL RAAKLDSSRP DPFALLGYWY EESNDYKRAA
GCYSKALLLD PSHPVAGRGL LRLKAGNLLG VLEKAIDRGS TLSGWAWLAL ATHKANVLGD
DELAVVSLVN ALRCRDILNP ESEPLAFCYY DPLGPRDSSC SDHATALCAL GSSYERLGRY
TAALRSFHSA IDESSLHVTT ASLISCAQVE IKLGLFEDAA ERLTTVVSTE NKDERLVAAQ
NLGIALHALA QRDLHDGKAG AALSHIVRGI EFLQSQLESH VCLQKLIGDL YTYAAVLPPD
LFESTFSNSS SISPNGQLSP HYQFIAAGEE FYNIAISNAT DLFKEGDELK HLQASLISDL
GCNILLQAQS CFSAHVHGVT SPSRKEVLLT SAATKFKSAL EIDPLHSPAW CGLGCALAVS
DPLLAQHAFS RAIELDKVSP DAYANLGFLY TSNARLAASA GVSDALTEVA DTPMMWINRA
IVLEYQARQS HQQEEEQQYR GYIREASNAY LASMQVVKRP AAVLGMSLLS RIDWGNPEAP
YAQRESSYYL DEYLASVGPA DLPAKILQRV AFLEKSASSH RSTSPAELSA MISGVTDATS
DLKAIGIGSE AGQGLDLDLI SGIGADVATE HSEEGTACEL SLPIPIGRRL MLTPRDGSVW
LELSKELVFA LSNDSPDCSF DAARSAAVQS LNILMRSVFH TSYVMSKPAK YKAADVSDAL
SLAHVLKNKA QNEWYSSSGH DFDLQRALIL CPTNKVARAA LTN
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