Gene PHATRDRAFT_47845 details

Gene Information

• Locus tag: PHATRDRAFT_47845
• ID: 7202979
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: +
• Start bp: 221358
• End bp: 223475
• Gene Length: 2118 bp
• Protein Length: 620 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002182181
• Protein GI: 219123749

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0593792
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AAATCGCGTC CACGCTCGTA GCATGGAGTC ACCGTAAAGA AGTAAGGTTT ATGATACCAT 
CTTTCAATTG TCTTCCGTGC GTGTTAGAGC TCAGCTTAAT TTCCTTGGTA CATAATAGTC 
CTCTCGCGTG CGCTGCATTG GCAGGCAGAA ACTTCGTTGA CGATAGAGTC TGCCTGCCCT 
GGATCTAAAC CACAGCCAAA AATATGACAT TGACGTCAAG TATTTCAACC GATTCAACAA 
ACGGTAAAGT TGGACAACTC GAAACGCCAA ACCAGCGTAG TATGGCAACA GAAAGAAGTT 
TTCTTTTCGG TTCTCGTCGG GTGTTTACGT TCGCCATGCT TGCTGGAGTT TTAATTTTTC 
TGATGGGGAG TCTCTCCGTG TCGATGCAAT CGCAGCAATA CATCGAAGCG CTCTATTCGG 
GGTTGTCCGC GGTCGCTAGT CTGAATAACA GCACCACCCT AAAAAGCGTT GAGGAATTGA 
CGTATGTTGC ACAGCAACAT TCTCCTGGAC TTACGGGACG AACATTACCG GAGCATCCCC 
ACGAAACACG AATACGACAA GCGATACATT CCCACTATCC TCATTTTGAA CATCATTCGG 
TTCGAGGTAA AGTTGTGGAC GTGACGCAGA ATGTTAACCG GATCGAAGAG CTGTCCTTAA 
CGAGGAAGAA AAATGTCACC TACATGGAAG TGAAGGATGA GGACCACGGA CCGTTGAATG 
TCGTCCTGTT TTACGCTGAC GACTGGACTT TGAAAGTGCT TGGAGCCTTA AACCCTCACG 
TAAAAACACC AAATATTGAT CAAATGGCGA AGAATGGAAT GCTCTTTCCC TATAATTGTG 
TCACCACGAG TATTTGCTGG ATTTCACGTG CCACGTTGGT AACGGGTGTT TATGCGGCGG 
TCCACCAACA ACTAAAAATT GCGCACAACA GTCTATTTAA TAACCTGACC ATTCCGTGGA 
CAGAAACTCT ATTTCCACAG CTGAAGAAGC ACGGCTATTA CACGGGATTA GTTGGAAAAT 
GGCACGCCCC GTCGCCAGGG AAAGAGATGA AATTGGCCTT TGATGTGATG AATATCTATT 
ACGGGCGGCA TTGGGAACTG CGAAACGGTC AACGTCGTCA CGTGACCGAT CTAAACGGCG 
AAGATGCGCT CAATTTTCTG AGAAGTCGCC CCAAAGACCA AAAGTTTGCA TTGAAGGTCT 
CCTTCTTCGC CACACACGCT CAGGACTACA CAATTCCAGC CTACTCGCCC ATGAACGAGA 
GTATGTCTTT GTACGAAGAC GACGACATTC CTTGGGTGCA AACGAATACA GAGCAGCACT 
GGAAAGATCT GCCTTGGTTT TTTGACAACC GCAACGAAGG TCGGCGGCGG TATATTGGTC 
GCTTCGATAC TCCCGATAAT TATCAATACA ACATCAAGTG CTTGTACCGT ATGGCGACCG 
AAGTTGATTC GGTTGTTGGC GAAGTGATTG ATGAACTCAA AAGGCAAGGT GTTTACGACA 
AAACGCTTTT GATCTTTACA ACAGACAACG GAAATTTGCA TGGCGAGCAC GGTCTTGCGG 
AAAAGTGGTA TCCTTGGGAG GAATCAATTC GAGTCCCACT GGTCATCCAA GATCCACGCA 
TGCCAGCAAC AGAACGTGGC AAAGTCAATG ATGAATTCAC GTTGTCGGTG GACCTTGCAC 
CGACGATTTT GTCGGCGGCA AAGATTCCGA TACCATCTCA TATGCAAGGT CGGGATATTG 
CCGAACTGTA CTTTGATCCA CACCAGGCAA CGGTATCATG GCGTAAGGAT TTCTTTTACG 
AATGGAGTCA AGGCGAGCCG GTAGAAGCCG TAGGCCATAA CGAGTACTAC CATATTCCAG 
CGGTCTTTGC GCTGATTCGC AAGGACTGGA AGTATTTTTA CTGGCCGCAG GTCAAAGTTG 
AGCAGCTATT CCAGATTGAG AACGATCCGT ACGAGCAGCG TGATGTGCTG AACTCGACGG 
CTCAAACAAC ACAAGAAGCA CTGGATTTTA TGAGGGCAAG ATATTTTTTT CTAAAGAACT 
ACTCCCAAAT GGGCAACCCA GTCTGATACT TCTCAGAAAA ATTCTTTTTC TTCTAATAGT 
ATGAAGCATT TTCTCTTA 

 

Protein sequence

MTLTSSISTD STNGKVGQLE TPNQRSMATE RSFLFGSRRV FTFAMLAGVL IFLMGSLSVS 
MQSQQYIEAL YSGLSAVASL NNSTTLKSVE ELTYVAQQHS PGLTGRTLPE HPHETRIRQA 
IHSHYPHFEH HSVRGKVVDV TQNVNRIEEL SLTRKKNVTY MEVKDEDHGP LNVVLFYADD 
WTLKVLGALN PHVKTPNIDQ MAKNGMLFPY NCVTTSICWI SRATLVTGVY AAVHQQLKIA 
HNSLFNNLTI PWTETLFPQL KKHGYYTGLV GKWHAPSPGK EMKLAFDVMN IYYGRHWELR 
NGQRRHVTDL NGEDALNFLR SRPKDQKFAL KVSFFATHAQ DYTIPAYSPM NESMSLYEDD 
DIPWVQTNTE QHWKDLPWFF DNRNEGRRRY IGRFDTPDNY QYNIKCLYRM ATEVDSVVGE 
VIDELKRQGV YDKTLLIFTT DNGNLHGEHG LAEKWYPWEE SIRVPLVIQD PRMPATERGK 
VNDEFTLSVD LAPTILSAAK IPIPSHMQGR DIAELYFDPH QATVSWRKDF FYEWSQGEPV 
EAVGHNEYYH IPAVFALIRK DWKYFYWPQV KVEQLFQIEN DPYEQRDVLN STAQTTQEAL 
DFMRARYFFL KNYSQMGNPV