| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47785 |
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| Symbol | |
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| ID | 7202945 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011683 |
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| Strand | - |
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| Start bp | 25026 |
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| End bp | 26925 |
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| Gene Length | 1900 bp |
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| Protein Length | 477 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182309 |
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| Protein GI | 219124015 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.183468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCTCA AGGGCGACAA AGGCCGTAAT ACAACTGGAC ACATGGCATT GTGGGAGACG
AGAATGGTCA TCCTGAATCG AGTGAAAATG ACTGAATTAA TTTGATAACT AATGAAGATA
GTTAGATTTT CCCAGACCGT GATAGGCAAC AAAATGCCAA GTCATCAACG AGTCTTTTGT
TGCTTTATCA ATTGTCTAAG CGAAGAAAGT CAAATAGAGT TTGAGACTTA TAGCATTTAT
CAAAACGGGA TCATGTGGTC TTATGCCTGT AACTTTTCGG TTGCTGGTGC TGTCGACTCA
CAGTCAGGTT GACTGTGAAA ACAAATTCAG GACACAATTT ATCGAAGTCA TGAAGTTCGC
TTACCTTCAA TTGTTCGCGC TCCTTGGAGG TCGAATGGCG CAAGCCAGCC AAATCTTAGT
TCGTAAGTAG CTAGCGGTGG TCGCCAAGTC ACTGAGAGAA GGTACTAATT TGCCTAATTA
CCTTGTATAT TGTAATTCCA AAGCTGGTTG TGGCTTGGTC GAGCCCGGCA AAGGTGACGA
CATTTGTCCA ACCGCATCTC TGTGGATGGG TCAGTATGAC TTGATTACAT TAGAAGATTT
CTCCAGCGAT TCGGACGTTG AAGGAACTTC CTTTGTTGGC GGCAACATAA TCTCCTCTCA
ATCGGCAAAC TTCGCCATCC ATATGACTAG CCTCGACCCG AAGCTGCCGG GACTAGAAGT
GGCTGGTTCC ATCGCTGACG GAAGTCCTCT CAATGTCAAC CGTGGGAGTC TCGTAATCGG
TACGGGCTCA ATCACGGGAA GCGGGCCTGT TCCGTACAAA GTTGGGAATC GTCGGATAAA
TGCAAACGCT GGAAATGAAG GAGCAAAAGT TAGAAAGGAT ATCACCCTCC GAGACAAGGC
CGGCCAAATT GAGCGGGAGT TGAAAAAATG GTCTATTGAA CTCAACAATC TTTCAGCCCC
CAACACATAC ACCCGTCCCA CAAATCAGCA TGGGCCTTTC ATTCTCAACG CAAAGACAAA
AGATATTAAC GGAGTTGCAG TGTTTTGGAT CACAGCCAAT CACTTGTTCG GCAACGACAA
AGTTCAACAA GTTGAGCTAC GAAACGACGT GAACGCTGCA ATGGTCGTCA TCAATGTTGC
AGGCAAAACA ATTAACTGGA ATTCTGGCAA CATGGTTGGT GCTTTCAATA ACAAGTCCGT
TCGCGGAACG ACGGTCTGGA ACTTTTTCGA AGCCGAGAAT ATCGACTTCG GATCGAAGAA
CTTTATGGGG GCATTGTTGG CTCCCCTAGC ACACGTCAAA ACTCGAGGCA ACATCGACGG
CGCCACAGCC GTTCGTATGC TGACAATCAA TGCTGAAGTT CATCTCCCTA CGCTTTCCTC
TGTTTGTCCC GACCACGCGG GAGCAAGTGC TCAAATATCT CCGACCGTGC CAATCTCTGA
CAGCGCACCA AAACAATTGC CAGCTGCATC CGTTACCAAA GCTCCTACGC GTGCACCTGT
GGTACCTCCA ACGCCTGCTC CGGTAGCAAC ACCTACAGGA GGAAACAGTG GGCAGTGCGT
TGCTGATTGG CAGGATTGCT CTAAGAGCCC GTCCTGTTGT GGGACTTCAG TCTGTGTCTT
TCACAACCAG TGGTATAGCC AATGCAAGCC CAAACCTTCA AGCTTTTCTG GGCAATGTGT
TTCCTTATGG GGAGATTGTA CCAGCAATCC CAGTTGTTGC GATGGTTCCA CATGCAATTA
TTCTAACCAA TGGTACAGTC AGTGTAAGCC CGCCGCCTCC ACAAACAACA GTGGTGGGCA
ATGTGTGGCT CTCTGGGGCG ATTGTTCAAA GAATCCCTCG TGCTGCGGCA GCAGTAAGTG
CATCTACAAA GATCAGTGGT ACAGTCAGTG CAGAAATTAA
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| Protein sequence | MPLKGDKGRN TTGHMALTQF IEVMKFAYLQ LFALLGGRMA QASQILVPGC GLVEPGKGDD
ICPTASLWMG QYDLITLEDF SSDSDVEGTS FVGGNIISSQ SANFAIHMTS LDPKLPGLEV
AGSIADGSPL NVNRGSLVIG TGSITGSGPV PYKVGNRRIN ANAGNEGAKV RKDITLRDKA
GQIERELKKW SIELNNLSAP NTYTRPTNQH GPFILNAKTK DINGVAVFWI TANHLFGNDK
VQQVELRNDV NAAMVVINVA GKTINWNSGN MVGAFNNKSV RGTTVWNFFE AENIDFGSKN
FMGALLAPLA HVKTRGNIDG ATAVRMLTIN AEVHLPTLSS VCPDHAGASA QISPTVPISD
SAPKQLPAAS VTKAPTRAPV VPPTPAPVAT PTGGNSGQCV ADWQDCSKSP SCCGTSVCVF
HNQWYSQCKP KPSSFSGQFS VSPPPPQTTV VGNVWLSGAI VQRIPRAAAA WYSQCRN
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