Gene PHATRDRAFT_47755 details

Gene Information

• Locus tag: PHATRDRAFT_47755
• ID: 7202920
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: +
• Start bp: 740505
• End bp: 743381
• Gene Length: 2877 bp
• Protein Length: 749 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002181967
• Protein GI: 219123304

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.373674
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGTCTC CTTACGGAAA CAAGAAAAAG GATCTAGCTA GTTCTAGCAC TATGCGTGTT 
CCTGCGTCAA AGACAAAAGA GTTGCGTCTA TTCGGACTCA CGATTTTGAT TTCCCTTTTG 
AACGCGATTT ATTGGTCATC GGAAATGTTG GGTTACCGGT TGAGCGACGG GGAGCCACGG 
TTCCTGACGC TCCCTAGCAC TTCATCGTTA CTGTCTTCCC CATCCTTTAC ATACCCGGCA 
ACATCTACCA AAAAACTTCC TGACGCGCCT TGGACAATCT TTTATAATGC GTACCTGCCG 
CTGGAGAACA CCACTGAAGC CTTTGCGATC ATTGAGGAGC AGTTGCAGCA GATCAATAAC 
TCTCACGGTG CTACAAGACC GGGACTTGCC CCAGTTAAGA TAAACTTACT CACGATCGGC 
GATCCGATTG GAGCGGAGAA GGTGCGAGCC TACTGTTCGA CGGAGACTAA TCTAGACTGC 
GAGCATTTGC AACACCATGA GGACGGCAGT TTCGAAGACG TTACCCTGTC TCGGTTATAC 
GACTTTTGTA GCAACCAGGA GACCGATGAT AATAAACTCG ATCCCAGCAC CTCGCCACAC 
GATCCGATTG TTGTCTACCT CCATTCGAAG GGAACTTATC ACCCCAGCGA AAGGAATGAT 
CACTGGAGGC GGTACATGAC AGACGCGGCG ATGAGTCAAG AATGCTTGGA GTTTCAAGAT 
CAACACGGCC GAGAGATTGC CCCAACGACA AACATTTCTT CTACTCATAA CACTCAGTGT 
AACGTGTGCG GATTTCTATT TCATCCGATA TGGACACCTT TTTTTCCAGG CAATATTTGG 
TCCGCCAAGT GCAGCTATAT CCGAAAGCTG ATGCATCCAC AAGTCTTTAA AAACCAATCC 
GAGTCGACGG CTGACAAGGC TGTGGCTCTC ATGAGAGAAG GACGTTTCAC TATGAATTTG 
CTATCCCCTT TTTTGGAAGT GGGCGGTTAC TTGGGACGTG AGCGATTCGC AGATGAGCAT 
TGGGTGGGGA GTCATCCCTC ATTGGTACCT TGTGACTTGG CTCCTAGGCC GTACCTGATG 
AAGTGGGTCC ACCCCCGACT ACGGAACAGT TTTCGTGCTC CGCCACTCGA ATGGTCAGTA 
GCGCCTCGCC ACGGAATCAA CGAAGATTGG TTGTTCTTGC AGGGTCTTCA AAAGAAGTAT 
CGGCTGGTGG CCGACCCTGA TTGGCGTCAT CGAGAGTTCT TCTTGTTGCC GGGAGCGCTG 
TGGAAGTGGA TCACCTGGTA CGACAAGGTA CCGCCGGCGT CTTCGTATGT GTGGAAATGG 
TTTCCGGATG GACTAGAATG GCTGGGACGC GTGGAAACAT TGGGTACGCA AGGTCTGCTG 
CAGTTTTTGA CTGAAGACAC CTTTCTATAC CCGTCAGATG AAGCGTCGAG TGTGAATCCG 
TTTCAGATCG TCGAGAAAGA TGATAAAGAA GGTTCATCGC GAACATTCTT CTTCCACATA 
CAGATTCCGA AGCAGCTTGC TGACGAGAAG AGCTTTCGTG GAGTTGTGCT TCGACGGCTT 
GAATCGATTG GCGAGCAATC CCCGGGAGCA ACGGTTTTCT TCAACACAGT AGGGGAATCG 
GGTATACTGG ACGTGGAAGA GATGAAAAAC TTTTGTAGAG AGAAGTTTCA TCTAGATTGT 
GTGCACATGG AGCACTTGGA TGCCGGGATG GATCTTGTCA CTTTGAATCG AGTACATGAG 
TTCTGCATGA GCCACAATAC ATCACGCGTT GGGTTTGTTA GGACAACAGG ATGGCCCGAG 
TTGTCGGCTG CTTTTGCGAG TCAAGAACGC CTAGAGCAAA CCAGAGTTGT GGCAAATGAT 
AAGTGCTGGA CAAACACAGA TTGCGATGTT TGCTCACTAA AGACCAACTC CAAATCCGGT 
AACATTTCAC CGAAGATTCA ACGTATTGTT ATTTCGTCAC CGTCGGTTAC CCATGGTGAA 
GTTAACAAAG AAACACGTGG TGATAAATCT TCCCGCAATG GATTGAAAAA GCGCGCCAAG 
CAGGCTCAGA AGGGACGGAG TCCTTTAATG TGGACAGCGA GTTGTGCGTA CATCAATGAT 
TTAATTCACC CAAACGAGTT CGCCTCTCGT TTGTCGGAAG ATCGTTGGAA AGACAGCCAA 
GTAAGTGGTG AACGTTGGAT ATTTAACAGC ACTTCAATCA CGCACTGCCA AGTTCATACA 
AAGGTAACAG CAGGGCAAGC ACCGATTAGT AAGAAGTGAA ACAAAGGCTT AAAGGAGAAG 
GGGAAAAGGA TGAAGGAATC CATGTCAGAA GCGGAGCTCA GCTGCTAGGA TTGGGGATCT 
CTCTCAACAG CAGGAAATGT GTTTGTACAG AATACCAACT TTGGATAAAT TATAGTGCTC 
TATACTGAAT CCTTTAACGA ACACGAGATC TGGAAACACA CTGTTTCCTC TACATTTATG 
GACAACGAAT GAGCTGTTGT CCAAACAGAC ACTATACCAG AATGGCAACT TTCTTTGTCA 
AACACAGTTT CAGGAATCAT GGTTCAATAA CTGTAAGCAA CCCCCCCCTC CCCCTCCCCC 
TTCCCTTTAG ACCATGTCTT GCTTGACAAG ATCCCTGTAG GAATCTGCTA CCTCCGATCA 
TGTTTCTGGA AACATGAATA TCAGCATCTT CCCATCCTCC TTGGAGACAG GGTTTTTCCA 
GCTCAAATGA ACACAAAGTA TACAGCTGGG CCATCGTATC TACAGTCAAT CGCTTTTCAT 
AAAAAAGGGA TAACTGCAAG TCTTGGCGAT TGTTGCAGGC CTTCCTCCAA GTCCTCTAAC 
CGAACATCGC TTCCAATCTC GAGCGACTCT GGATGGGTCG TTCTAAGGTG TGCGTGT 

 

Protein sequence

MVSPYGNKKK DLASSSTMRV PASKTKELRL FGLTILISLL NAIYWSSEML GYRLSDGEPR 
FLTLPSTSSL LSSPSFTYPA TSTKKLPDAP WTIFYNAYLP LENTTEAFAI IEEQLQQINN 
SHGATRPGLA PVKINLLTIG DPIGAEKVRA YCSTETNLDC EHLQHHEDGS FEDVTLSRLY 
DFCSNQETDD NKLDPSTSPH DPIVVYLHSK GTYHPSERND HWRRYMTDAA MSQECLEFQD 
QHGREIAPTT NISSTHNTQC NVCGFLFHPI WTPFFPGNIW SAKCSYIRKL MHPQVFKNQS 
ESTADKAVAL MREGRFTMNL LSPFLEVGGY LGRERFADEH WVGSHPSLVP CDLAPRPYLM 
KWVHPRLRNS FRAPPLEWSV APRHGINEDW LFLQGLQKKY RLVADPDWRH REFFLLPGAL 
WKWITWYDKV PPASSYVWKW FPDGLEWLGR VETLGTQGLL QFLTEDTFLY PSDEASSVNP 
FQIVEKDDKE GSSRTFFFHI QIPKQLADEK SFRGVVLRRL ESIGEQSPGA TVFFNTVGES 
GILDVEEMKN FCREKFHLDC VHMEHLDAGM DLVTLNRVHE FCMSHNTSRV GFVRTTGWPE 
LSAAFASQER LEQTRVVAND KCWTNTDCDV CSLKTNSKSG NISPKIQRIV ISSPSVTHGE 
VNKETRGDKS SRNGLKKRAK QAQKGRSPLM WTASCAYIND LIHPNEFASR LSEDRWKDSQ 
ESATSDHVSG NMNISIFPSS LETGFFQLK