Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47667 |
Symbol | |
ID | 7202857 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | + |
Start bp | 471390 |
End bp | 473573 |
Gene Length | 2184 bp |
Protein Length | 606 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181914 |
Protein GI | 219123193 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0434926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGACTTTGA GGAGTCTCCA TGTCCAACGC ACAATTCTTC TGTGCCCGAA ATCAGCATCA TTATCCCAAA CCAAAAGATT GGCTGACGAA TCGTAACTAT GGTAAGTTGA CTTCAGGGTC GATCACACAT TATCGCCGTA CTAACTGTAA AGCGAGCTGG ACCTCATTGG ATTGAAAAGG GAGAGAGTGA TATGGCAGAT TTCTGTCAGA CCGATGGCTC TCATTAATCA AGAGATTATT TTTCCAAGTC ATTTATCTAA CTTGTATTGT GCATTTTTGA TGGGCAGGCT GAAGAACAGA ACGACGTTGA GGCGATGGAG GTCGACAAAG CCACTGAGGC TAAATCTCGC AAGGATCGTC CTACTGGATC AATCCATTTC GGCGACACCG ACTTTGACGT TGACGAGCAA GTTGGGGACG CTACATGGGC CGAGGTATGC AACGCCTGTT GTGTCCACTC CGGACAGGAA TGGGCAATGA TCGCTCTTGG AATCTTCCTG GTTTGCTTCT TCCTCTACTT CTTCCTGTTG GGTCTTGACC TGCTTGGAAA TGGTGCAAAG GTCATGTGTG GATGCACTGC CGGAGAGTTG TTCGGCGACG ACACGAATCC CATCGCTGGT CTAATGGTTG GTATTCTTGC GACTGTATTG CTTCAGTCGT CTTCAACAAC TACCTCGATT GTTGTGTCTT TGGTCGGATC CGCTGTCTCC GTCCGCCAAG GAATTTACAT GATCATGGGA GCGAATATTG GTACTTCAGT CACCAACACA ATCGTCGCTA TGGGCCAAAT GGGCGATGGG GATCAGCTCG AGCGTGCTTT CGCTGGTGCC ACCGTCCACG ATATGTTTAA TTTCTTGTCA GTGGCCATAC TTCTTCCTGT AGAAGTCATC ACAGGATACC TCTATCGGCT TACTAAGGCT ATGGTCAAGA ATGTCAATCT CGAAGACGGT GATAGCTGGG ACGGTCCTAT TAAAAAGATG GTTGATCCTC TGACCGATAA GATCATCATT TCCAACAGCA AGATTATCAA ATCTGTGGCT TTGGGTGAAG CGACCTGTGA TGTGGGTGGT GGATTTTACC CTATGAACTG TACAGAAGAC ACATACTTGG GTTGTGGCAA GGCATTTGGA CTCATTTCGT GCAGTAAGAC GAGCGGCGAT TGCCCTGCTT TCTTTCAAGG TGATGCTTCC GCAAAAGATG ACAAGGTCTC TGGGGGTGTT GTCTTTTTCA TTGCTATTGT CATCCTGTTT GTATGCCTTG CCGGGCTTGT TACTGTTCTT CAGAAGTTGC TGCTTGGAAT GTCCACTCGC GTTGTCTACA AAGCCACTGA CATTAACGGA TATCTTGCGA TTGCTATTGG CGCTGGTCTC ACTATGATTG TGCAGTCCTC CTCCATTACT ACGTCCGCTT TGACTCCGTT GGTTGGTATG GGAGCGCTTC GTCTTGAGCA AATGTTACCT CTTACACTTG GTGCCAATAT TGGTACAACG CTGACTGCCA TTTTGTCTGC CCTTGTGTCT GCAAGCAAGG ATTCGCTCCA GGTTGCCCTT GCCCACTTGT TCTTCAACTT GACTGGAATC CTCATCTGGT ACCCGGTGCC TTTCATGCGT CATGTCCCTC TCGAGGCAGC TCGTAGACTT GGAAAATTGA CTCGAGTCTG GCGTGGTTTC CCCATTGTTT ACATTGCGGT GATGTTTTTT CTCATTCCGC TTCTTCTGCT CGGCCTGTCG TCTCTTTTCG ATGATGGCAG CAAGGGTTTC ACTGTCCTGG GATCCTTCCT TACCATCCTT CTGTTCCTTG TCATCATTTA CACTGTCTAC TGGTGCCGTT ACAAGGACGG TCAGCAGAAG TGCGCAAACT GCATGGCGGA GCGTGAGAAG AAGCGCGTTG TGATTAAAGA GCTCCCTGAG GATATGGCGT ACCTGAAGGA GCACATGAAG CGCCTCATTG AACACACTGG ACTCCCCGAA GACGAAGATG TTCCGGCCAA GGATGAATCT CCTGATACTT CGGATGCTGA GGTTGATGCC TAAGCACCAA ACAAGAGGTC GATATCGCCG AATATTGGTT AGAGGTCCCC TTTTGATTAT CCGTTTAGTA TATATAGTAT ATACAACCTG TGCCAAGACC ATAGTTCTCG CAGATTCTGC TTGAGAATAA AATAACTTGG GAATGTTTAT CTTA
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Protein sequence | MSNAQFFCAR NQHHYPKPKD WLTNRNYEQN DVEAMEVDKA TEAKSRKDRP TGSIHFGDTD FDVDEQVGDA TWAEVCNACC VHSGQEWAMI ALGIFLVCFF LYFFLLGLDL LGNGAKVMCG CTAGELFGDD TNPIAGLMVG ILATVLLQSS STTTSIVVSL VGSAVSVRQG IYMIMGANIG TSVTNTIVAM GQMGDGDQLE RAFAGATVHD MFNFLSVAIL LPVEVITGYL YRLTKAMVKN VNLEDGDSWD GPIKKMVDPL TDKIIISNSK IIKSVALGEA TCDVGGGFYP MNCTEDTYLG CGKAFGLISC SKTSGDCPAF FQGDASAKDD KVSGGVVFFI AIVILFVCLA GLVTVLQKLL LGMSTRVVYK ATDINGYLAI AIGAGLTMIV QSSSITTSAL TPLVGMGALR LEQMLPLTLG ANIGTTLTAI LSALVSASKD SLQVALAHLF FNLTGILIWY PVPFMRHVPL EAARRLGKLT RVWRGFPIVY IAVMFFLIPL LLLGLSSLFD DGSKGFTVLG SFLTILLFLV IIYTVYWCRY KDGQQKCANC MAEREKKRVV IKELPEDMAY LKEHMKRLIE HTGLPEDEDV PAKDESPDTS DAEVDA
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