Gene PHATRDRAFT_47667 details

Gene Information

• Locus tag: PHATRDRAFT_47667
• ID: 7202857
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: +
• Start bp: 471390
• End bp: 473573
• Gene Length: 2184 bp
• Protein Length: 606 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002181914
• Protein GI: 219123193

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0434926
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTGACTTTGA GGAGTCTCCA TGTCCAACGC ACAATTCTTC TGTGCCCGAA ATCAGCATCA 
TTATCCCAAA CCAAAAGATT GGCTGACGAA TCGTAACTAT GGTAAGTTGA CTTCAGGGTC 
GATCACACAT TATCGCCGTA CTAACTGTAA AGCGAGCTGG ACCTCATTGG ATTGAAAAGG 
GAGAGAGTGA TATGGCAGAT TTCTGTCAGA CCGATGGCTC TCATTAATCA AGAGATTATT 
TTTCCAAGTC ATTTATCTAA CTTGTATTGT GCATTTTTGA TGGGCAGGCT GAAGAACAGA 
ACGACGTTGA GGCGATGGAG GTCGACAAAG CCACTGAGGC TAAATCTCGC AAGGATCGTC 
CTACTGGATC AATCCATTTC GGCGACACCG ACTTTGACGT TGACGAGCAA GTTGGGGACG 
CTACATGGGC CGAGGTATGC AACGCCTGTT GTGTCCACTC CGGACAGGAA TGGGCAATGA 
TCGCTCTTGG AATCTTCCTG GTTTGCTTCT TCCTCTACTT CTTCCTGTTG GGTCTTGACC 
TGCTTGGAAA TGGTGCAAAG GTCATGTGTG GATGCACTGC CGGAGAGTTG TTCGGCGACG 
ACACGAATCC CATCGCTGGT CTAATGGTTG GTATTCTTGC GACTGTATTG CTTCAGTCGT 
CTTCAACAAC TACCTCGATT GTTGTGTCTT TGGTCGGATC CGCTGTCTCC GTCCGCCAAG 
GAATTTACAT GATCATGGGA GCGAATATTG GTACTTCAGT CACCAACACA ATCGTCGCTA 
TGGGCCAAAT GGGCGATGGG GATCAGCTCG AGCGTGCTTT CGCTGGTGCC ACCGTCCACG 
ATATGTTTAA TTTCTTGTCA GTGGCCATAC TTCTTCCTGT AGAAGTCATC ACAGGATACC 
TCTATCGGCT TACTAAGGCT ATGGTCAAGA ATGTCAATCT CGAAGACGGT GATAGCTGGG 
ACGGTCCTAT TAAAAAGATG GTTGATCCTC TGACCGATAA GATCATCATT TCCAACAGCA 
AGATTATCAA ATCTGTGGCT TTGGGTGAAG CGACCTGTGA TGTGGGTGGT GGATTTTACC 
CTATGAACTG TACAGAAGAC ACATACTTGG GTTGTGGCAA GGCATTTGGA CTCATTTCGT 
GCAGTAAGAC GAGCGGCGAT TGCCCTGCTT TCTTTCAAGG TGATGCTTCC GCAAAAGATG 
ACAAGGTCTC TGGGGGTGTT GTCTTTTTCA TTGCTATTGT CATCCTGTTT GTATGCCTTG 
CCGGGCTTGT TACTGTTCTT CAGAAGTTGC TGCTTGGAAT GTCCACTCGC GTTGTCTACA 
AAGCCACTGA CATTAACGGA TATCTTGCGA TTGCTATTGG CGCTGGTCTC ACTATGATTG 
TGCAGTCCTC CTCCATTACT ACGTCCGCTT TGACTCCGTT GGTTGGTATG GGAGCGCTTC 
GTCTTGAGCA AATGTTACCT CTTACACTTG GTGCCAATAT TGGTACAACG CTGACTGCCA 
TTTTGTCTGC CCTTGTGTCT GCAAGCAAGG ATTCGCTCCA GGTTGCCCTT GCCCACTTGT 
TCTTCAACTT GACTGGAATC CTCATCTGGT ACCCGGTGCC TTTCATGCGT CATGTCCCTC 
TCGAGGCAGC TCGTAGACTT GGAAAATTGA CTCGAGTCTG GCGTGGTTTC CCCATTGTTT 
ACATTGCGGT GATGTTTTTT CTCATTCCGC TTCTTCTGCT CGGCCTGTCG TCTCTTTTCG 
ATGATGGCAG CAAGGGTTTC ACTGTCCTGG GATCCTTCCT TACCATCCTT CTGTTCCTTG 
TCATCATTTA CACTGTCTAC TGGTGCCGTT ACAAGGACGG TCAGCAGAAG TGCGCAAACT 
GCATGGCGGA GCGTGAGAAG AAGCGCGTTG TGATTAAAGA GCTCCCTGAG GATATGGCGT 
ACCTGAAGGA GCACATGAAG CGCCTCATTG AACACACTGG ACTCCCCGAA GACGAAGATG 
TTCCGGCCAA GGATGAATCT CCTGATACTT CGGATGCTGA GGTTGATGCC TAAGCACCAA 
ACAAGAGGTC GATATCGCCG AATATTGGTT AGAGGTCCCC TTTTGATTAT CCGTTTAGTA 
TATATAGTAT ATACAACCTG TGCCAAGACC ATAGTTCTCG CAGATTCTGC TTGAGAATAA 
AATAACTTGG GAATGTTTAT CTTA 

 

Protein sequence

MSNAQFFCAR NQHHYPKPKD WLTNRNYEQN DVEAMEVDKA TEAKSRKDRP TGSIHFGDTD 
FDVDEQVGDA TWAEVCNACC VHSGQEWAMI ALGIFLVCFF LYFFLLGLDL LGNGAKVMCG 
CTAGELFGDD TNPIAGLMVG ILATVLLQSS STTTSIVVSL VGSAVSVRQG IYMIMGANIG 
TSVTNTIVAM GQMGDGDQLE RAFAGATVHD MFNFLSVAIL LPVEVITGYL YRLTKAMVKN 
VNLEDGDSWD GPIKKMVDPL TDKIIISNSK IIKSVALGEA TCDVGGGFYP MNCTEDTYLG 
CGKAFGLISC SKTSGDCPAF FQGDASAKDD KVSGGVVFFI AIVILFVCLA GLVTVLQKLL 
LGMSTRVVYK ATDINGYLAI AIGAGLTMIV QSSSITTSAL TPLVGMGALR LEQMLPLTLG 
ANIGTTLTAI LSALVSASKD SLQVALAHLF FNLTGILIWY PVPFMRHVPL EAARRLGKLT 
RVWRGFPIVY IAVMFFLIPL LLLGLSSLFD DGSKGFTVLG SFLTILLFLV IIYTVYWCRY 
KDGQQKCANC MAEREKKRVV IKELPEDMAY LKEHMKRLIE HTGLPEDEDV PAKDESPDTS 
DAEVDA