Gene PHATRDRAFT_47422 details

Gene Information

• Locus tag: PHATRDRAFT_47422
• ID: 7202555
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: +
• Start bp: 587818
• End bp: 588611
• Gene Length: 794 bp
• Protein Length: 166 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002181589
• Protein GI: 219122515

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCAATCGAAA GTGTTACTAA TCACCCGTTC CTACGCAAAA CTAGCAAGCT CACTGATCTT 
TAGATCAACA AAGGTTTTTG CGTTTTCCGG CAGAGGAAGA AACGCAATGT CGGGGTTCGG 
AATGGCCCCT TTTGGCGCCA ATCACATTTC GACAACTCAC ACTACCTCGA TCGATGCATC 
GACTCCATGG GTGGCAGCTT CGGACGGAAA TCTACCTCTC TTGCAAACAT CATTGTCGGC 
TCTAAAGTTG ACAGTCGCAG CACAAGACGA GAACGGCTAC ACATGCTTGC ACGCGGCCGC 
TTCGTACTCT CAACTACCGA TAATAGAATG GTTACTGACC CAAGACTCAA GTCTACTCCA 
CCAGGTCGAC AAAGACGGCG ACTCGGCCTT GCATTACGCG TCGACAGTCG AGGCTTGTCA 
AAGCTTGGTG ACACAAAGCA TCGACGTTCA GACTAGGAAC CATTCGGGGA AAACAGCCCT 
TGAAGCCAAG CGTGCAGAAC TCGACGAACT CATTCAGGAC GAGGACTTTG AAGAAACAGA 
TCCCGAAGCC GTCACATTGC GCAGAGTTGT AGAATATCTG GCATCGCTCT CAACAATTTC 
ACAATAGCGA TTTTTCCAGC ACCTTACAAA GAGTTGAAGA AATCTATGAC AAAAAGTTCC 
TCCTGTCTCG GGATGAGCAA TGGCTGTGTA TCCTCACAGT AGTTCTACGA GAGCAGTACA 
CTATCCAGAA GCATCCCGTG GTCGATGTGA ATTAGAGGCT CAATAATTTG TTCGGAAGAA 
ATCATTCAGC TACC 

 

Protein sequence

MSGFGMAPFG ANHISTTHTT SIDASTPWVA ASDGNLPLLQ TSLSALKLTV AAQDENGYTC 
LHAAASYSQL PIIEWLLTQD SSLLHQVDKD GDSALHYAST VEACQSLVTQ SIDVQTRNHS 
GKTALEAKRA ELDELIQDED FEETDPEAVT LRRVVEYLAS LSTISQ