Gene PHATRDRAFT_47412 details

Gene Information

• Locus tag: PHATRDRAFT_47412
• ID: 7202449
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: -
• Start bp: 562545
• End bp: 566608
• Gene Length: 4064 bp
• Protein Length: 1256 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002181753
• Protein GI: 219122855

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CACAATCGAG TGATCTACGG CTTGTTCCTT TTACAGTAAC AGCTTCTGAT CCATTCTACT 
TTGCAAGCAA TTCCATTGCT CTCTACGAAT CAAAATAAGA TAGTTTCTGC AGTTAGTGCA 
TGTCTTTTGT TCCCAACCCG ACGCAGACTA ATGCGTCTTC TACCCCCAAC AACAATGGTA 
CTAGTACCAG CGCCAACCAG GTAGTTGCCG TTGCCGCTGG GGCACCCGCC CCAGAGGTCT 
CCGACCATGA TCTCATCTTC AAGATCCGTA CTTTCGATGT CTTTTGGGTT GACAAGACGG 
CGCTCATGTA CAAGGATGGT ATTGCCAAGG TACGTTCGGG CTTTGGCTAC AGGGGGGCGT 
TCTCGTTTCC TACGATTGCC CGTGCTAATC TAGCCGCAAC GAATTTGTAT TTCCGCTTTT 
AGACGTTCGA CAAGGATACG CGCAAGGCAT TTATTACCAT CAAGCAGCGT TCTTCCATTC 
CTATCATTCT CCGCGATATG GCGCCACCGG AGGGTTCCAT CTTTGACCCT GCCAAAAAGT 
GGGATGAGGA AAAGTATCGC CGTCTCCGTG CGACCCAGGA AGCGGCGGAA GAGGAAGCTG 
CCGCTGCGGC GGCCGAAAAG GACAAGAAGA AAAAGAAGGG CGGCGAGAAG AAAAAGTCGA 
CCGCTGATTC CATCAAAGAA AAGAACGCGG TGGAGAAGCT CAAGAAAGAC CACGAACGCG 
ATTTGCAAAA GCTCTCCAAC CTCGGTACCC TACGGGCTCT CCAAGATACA TCGTGCGAAA 
CAACCAACGG AAAGATTCGC CGGATGATGA AAATGCTTCA CATCGCCGTC TCCGACCTCC 
GTAAAGGTGA AGTTCATTCG AGCGAGGCCG AAGTTCTCGA CATTCTCTGG GCATTGGAAG 
AAATGTCATC CTTTCAGGCG GCGATGAACG AGATCTCGGA CGAAAAGTTT GCCAAGAAGG 
AAGCGAAAGA ATCCGACAAG TCAGACAAAA AGTCTTCTAC AAAAAAAGAG ATTAAGAAGG 
ACAAAAAACC GACAAAGAAG GATCCTAAAA CCGAAAAGAC GGACAAGAAA GTCGAGAAGG 
TTGTTCTTAG TACCGATGCA CAGACATTGA AGAATCTACT GAAGGAAGGC TACAAGGACT 
CGCTAAAATA CGCCCGTGGC CTCCTGAACG GGAAAGAAAG CTTGATTTCC TTTCAGTTGA 
TGGAAATGCC GGATCGTCTT CCCCCTTTGT CTCGGTACAA CCGTCAATTC AAACTTGAAG 
ATTGGCAATG TGATATTCTC CAGGCCATTG ATGATCGCCA GTCTGCCGTT GTTTGTGCGC 
CAACATCATC CGGAAAGACT TTGCTGAGCA CGTATACATG TAAGAACGCC AAAGGTACAG 
TCCTTTTTGT TCTTCCCAGT GAAGTCCTGG TGTGGCAAGT TGCTTCCACG TATTATCAGT 
TCTTCAAAGG AAATGTCACG GTATGCACGG ATCAGATAAC CTTCCAAGAA GTCACCGGTG 
ATGCACAGGT GTATATTGGA ACTCCCAAAG CTTTAGAACG AAGCATCAGC AAAGTTCGAG 
GTGTTGCTGG AGAGGAAATG ACAAAAGGTG AACGAGAGTT CATGGTATTG GATGGTGGCT 
ATCATCAATT TGATTATTTA GTTCTTGACG AGGTCCATAC CTTGAATGGG CCTGAAGGTG 
ATGCTCTTCA GCGCATCATT AAGGCTTGTA ACTGCCCGGT GCTAGCCTTG AGTGCCACTA 
TTGGAAATGC GAATCAGCTT CGAAACTGGT TTAGTACCGT TCGCAACGAT CATATCGACG 
CTTTGGCTGT TGATGTTCCC GAAAAGCCCG AAGAAGTCAT TCTAAAGGAG CACTTCGCCC 
GCTTCATAAA CTTACAGCGC TATGTTATTG CCGAAGCCGA AGGGAAAGAT GGGAAACTTA 
AGCAAAAGCT TGTCAAGCTG CATCCGGTTG CGGCCATGAC TCCTGATCGT CTCAAGAATC 
AGCCCGAATT GATTGGCGGT CTTTCCATGA CTCCGTCTGA TCTCATGGAT TTATGGAAGC 
GCATGCGGGC GATCTTCCCC TCCACTGTCC TCGAAGATCT TGACGACCCG GACAAATTCT 
TTGCTCAATA CGTTGATGAA AGCAAACGTG TCACGTTGAA TCAGACAAAG GAATACGAGA 
CTCGTCTAAA GACACGCCTT GCGGTGCTGG CTGAATCCCA TCCCGAACTC TTTGAACGCC 
TCCGTAAGGC TCAGCTCCCC CCACCATTGA CTGCGAAGGA GGATGTTAGT GACACTTTGT 
ACGGTATTCT CGAACAGCTG AAACAGAGCG AATTGCTTCC TGCTGTTGCT TTTCAACTGA 
ATACGTATGG AGCATTTAAC ATGTTCAAGA CTCTCTTACA TCGCTTAGAG AGTGAGCAGG 
TAGCAGAATT TCCGAGCTAT CGCAGGGACT TGATTGAACG AGCTAAGAAA AATGCGCAGA 
TGCGAAAAGT TGCTGCTGGA AAGGCCAGCC GCGAAAACGC AGCCGAGGCA GAGGAAGAAG 
CGAAACAAGG GTTTGTGGAT GAGTCGCTTC TCCAAGAGGA TACAACGAAA CCACACGACA 
AATACGTTCT AGCTGCTGCA GGAAAACGTC TCGGTTACAA CGAGGTCGAA GATATCATTG 
CCGACATGAA GAAATCTGGC GAACGCGTCG ATATCAACCA CGCTTTGATT CGCGGTCTTC 
GTCGTGGAAT TGCCATCTAT ACAAACGAAG TTGGATTCTC ATGCTATCGC CGCCAAGTGC 
AGATGCTTGC TCAAAAGGGC CGGTTAGCGG TTGTATTCTC TGACGATGCC CTCGCTTACG 
GTGTAAACAT GCCGTTTCGG ACTTGCATTT TCTGTGGTGA TATGGGGGAC GCTCTTACGC 
CTCTTATTGC GCAGCAGATG CAAGGTCGAG CTGGTCGACG TGGCTTGGAC GTGCAGGGTA 
ATATCTTATA CCTCGGAATG GACTGGCCAT ACATTGAAAA CCTGATGCTG GGACAGATCA 
GTCAAGTTAC CGGTAAGGAA CCTCGTTATC CTTTGATTGT TCTCCAGCAA GCTCTCGCGG 
CTTCCAACGA TCCTGATGAT ACAAAGCACT TCATCCATGA CGACGGAGTA TCTCCTTTTG 
CCAATGCAGT ACGTCGCATT CAGAGGAGCC AGCATTGTTT CCCGACGGTG ACGGAAGAGC 
AGATGGATTG GATGTGTAAG ACGAGCCTCG AAGACTTCTG CAAAGGGGCT GAGACAGATC 
ACTATCGCGA TATGTCGACG ACTGTCGTGA AAGGGCTTGG ATATGTGCAC GATGACCTTA 
CGTTGGCAAT GGATCACAAC GTACTTTGCA TGGTTTGGGA GCTTCACGAA TATTTGCCTG 
AGGCTGTACA TCTGTGTGCC GTACTCGAAC AAATGTACAT TCGTTTCTGT TACAACAAGA 
CGAAAAGCTA CAAGGAAAGT GACTCGACCC AGAATGAATT TTTGTCTGTT CTTCTTCATG 
TCGTGGACCG TGTTCCAGCG AAAGAAGGGG AAGAATCCCT CCAGCAGATC CTACGTGTTT 
CACAATCTGA TGATGGTAAA GCGCTGAATG AAGAAGCCCG AGCAATGTGG CTTGAAACTG 
AGAAGATCCT ATGTGAGCAA CAGGCTTTGA TAGACAGTCT GAATGTTGAT GAAAGTGAGA 
AAAACAAGCT TGGCCTCATC ATTCCTGCAG CAAATGAAGT AGACAATGCT GGTGTTCCTT 
TGGATAAAGG CGTCTACGAA ATGCTCGTTC TGAAGCAGAA GGGTTTCTCT GAAGAACAAA 
GTACATCGCG CAGAAACGAA TTGAAGAATC GTATTGTGCG TCTGGGTCAA ATTTGCCAGA 
TTACTCACAA CTCTATTCAG CAACCACACG GAAAATATGA CGCTCTTGAG GTGCACTTTC 
GTCGTATGTT TTCTAACATC AAGTACAGCG TTGCGGATAT GATGAATCAA ATCTCGAACC 
AGGAAGATTT GACGGAAGTC TAATCGGAAA GCTTGCTTCC CTAGTAGATA GCATTAGTGA 
CCCTATTGAC TGCAAATGTA TATAATATTC TCTTTAGTAC TTGC 

 

Protein sequence

MSFVPNPTQT NASSTPNNNG TSTSANQVVA VAAGAPAPEV SDHDLIFKIR TFDVFWVDKT 
ALMYKDGIAK TFDKDTRKAF ITIKQRSSIP IILRDMAPPE GSIFDPAKKW DEEKYRRLRA 
TQEAAEEEAA AAAAEKDKKK KKGGEKKKST ADSIKEKNAV EKLKKDHERD LQKLSNLGTL 
RALQDTSCET TNGKIRRMMK MLHIAVSDLR KGEVHSSEAE VLDILWALEE MSSFQAAMNE 
ISDEKFAKKE AKESDKSDKK SSTKKEIKKD KKPTKKDPKT EKTDKKVEKV VLSTDAQTLK 
NLLKEGYKDS LKYARGLLNG KESLISFQLM EMPDRLPPLS RYNRQFKLED WQCDILQAID 
DRQSAVVCAP TSSGKTLLST YTCKNAKGTV LFVLPSEVLV WQVASTYYQF FKGNVTVCTD 
QITFQEVTGD AQVYIGTPKA LERSISKVRG VAGEEMTKGE REFMVLDGGY HQFDYLVLDE 
VHTLNGPEGD ALQRIIKACN CPVLALSATI GNANQLRNWF STVRNDHIDA LAVDVPEKPE 
EVILKEHFAR FINLQRYVIA EAEGKDGKLK QKLVKLHPVA AMTPDRLKNQ PELIGGLSMT 
PSDLMDLWKR MRAIFPSTVL EDLDDPDKFF AQYVDESKRV TLNQTKEYET RLKTRLAVLA 
ESHPELFERL RKAQLPPPLT AKEDVSDTLY GILEQLKQSE LLPAVAFQLN TYGAFNMFKT 
LLHRLESEQV AEFPSYRRDL IERAKKNAQM RKVAAGKASR ENAAEAEEEA KQGFVDESLL 
QEDTTKPHDK YVLAAAGKRL GYNEVEDIIA DMKKSGERVD INHALIRGLR RGIAIYTNEV 
GFSCYRRQVQ MLAQKGRLAV VFSDDALAYG VNMPFRTCIF CGDMGDALTP LIAQQMQGRA 
GRRGLDVQGN ILYLGMDWPY IENLMLGQIS QVTGKEPRYP LIVLQQALAA SNDPDDTKHF 
IHDDGVSPFA NAVRRIQRSQ HCFPTVTEEQ MDWMCKTSLE DFCKGAETDH YRDMSTTVVK 
GLGYVHDDLT LAMDHNVLCM VWELHEYLPE AVHLCAVLEQ MYIRFCYNKT KSYKESDSTQ 
NEFLSVLLHV VDRVPAKEGE ESLQQILRVS QSDDGKALNE EARAMWLETE KILCEQQALI 
DSLNVDESEK NKLGLIIPAA NEVDNAGVPL DKGVYEMLVL KQKGFSEEQS TSRRNELKNR 
IVRLGQICQI THNSIQQPHG KYDALEVHFR RMFSNIKYSV ADMMNQISNQ EDLTEV