Gene PHATRDRAFT_47281 details

Gene Information

• Locus tag: PHATRDRAFT_47281
• ID: 7202366
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: -
• Start bp: 172436
• End bp: 174601
• Gene Length: 2166 bp
• Protein Length: 690 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002181672
• Protein GI: 219122687

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCTCGACGC CATGTCGACA TACAGTTGAG TCGCTCCCAG GAGCTTTCTC TCTTTCAAAA 
CTACACACGT GCGTTGTGGT CCCCCAGCAC GAAATGGGGA AAGGCAAAAG ACCATCGATC 
AGTCTCTTTG CTTTTTTGCA AGCGACCTTT TCGGTGGTTT CGATTCAAGC TTTTCAAATG 
CCGACGACTT GTCGGACAAT GAGCACTGTC GTCTCGTATA GGGAGACTTA CCCCCAACAC 
CCGTGTTTCT CGCAACAAAG ATATAACAGC CACATTTGCA TGGAGCCGGG GATTATTCAA 
GTAGAAGAAC TTTCCGACCA AGACACCTTT TGTTCCTATA TCAACTGCAT GAAGGAAATT 
GTCGAGAACC AGCGAGTTGT CAAAAAGTGC AGCCTCGACG AATGCAAGCC AGTACAAGAA 
TACTTGTTTT CCTCCCAATC GTTGCTTTCA TTACCGGATA TCAGTGTGGA TGGATTTAAG 
GATCGCCTTC GCGACCAGAA AAGGCAATTT TTAGAAGAGA CAGGCTTTTC GGAGGAGCAG 
TATGAATATC TAGTCCGTTG TCTAGCTTAT CTTGGCGATC GCTGTGCGAA AATCCAACAA 
ATTGCACCGG CACTCATTGC GTGGAAAAAG ATGAGAGAAA GTGGCATGAA ACCTCGAGAG 
CGCTTCGTAA GCACATACAT GTACGTTCTG AGTCTTGACG AACGTAATGT GCAAGCGTGT 
TTCGAAACAG CAACGTTTCA CGATGTACTA TTCGAACCTA CGGAGAAATC CATTTTCTTG 
AGAATAAAGA CGTTAATCAG CCAGAGCGAT GCTAAAACTG CGGAATACAT TTTGTCGTCG 
CTTCCAGATA GACAAGGAAA AAGCTCCGAA TGGAAGAAAC TTAGAACGTT CCTTCCTATT 
CTCAGTCACT ATTGCGATGT GGGTGATATG ATATCCGCGT TGAACTTATT TCGTAAAATG 
AGGAAATCTG AAGGTGTAAT TTTCGACTCG GAGACATATG GTCTTCTCAT CGGTGCTCTA 
GCCAGACGCG GTTACTTCAT ACCCGGAGGT CTTTCTGTTG ATGGCGCTTC TACGCTTGGA 
TCATTGGAAA TGGGAGGTCC TGCCCTTTTT GATACTATTT CTACTGAAAT GGCCGAGGAT 
CTTCTCGAGC TGAGTCTAGA TGCGGCTGAA ACCATCCTGG ATGGATTCGT GTCTGGGTTT 
GCAGGGGAGA ATTCTTATGA ATTCGATTGT GTCACTGATA AGTGTATAAA TGTCAGTCCA 
TTGCTGACTA TAGGCCGTGT CACGGTGAAC GAAACCTCCG CCGTATGCCC AGCAACCGGT 
GCCAATCTCC GTCTATTTGC TCTGACGGAA GAGCAACGGA TAAGTGTTCA TGATACCTTA 
CTTGAAATGG CAGCGGTGCA ACACGAAGAC TTTAGCGAAA AGCTAAAAGC AAGAAACCAA 
AACTTTAAAG GTAGAGGAGA CTCTGAGCGG GCACGGCGAA ACCTTTTTGA GTTTTCAGAG 
TGGTTGCGTG AGCACGAAGG AGAACCATTT ACTGCAATTG TTGATGGAGC AAATGTTGCC 
TATGCTGGAC ATGGCAATGT GCACTATAGC CAGGTCCAGC TCGTCGTGGA CAAACTTGAG 
GACATGGGTG AGAAAGTGTT GGTCGTTATG CCTTCAAAAT ATGTTGGAGA AAAATTTTAC 
GTGGCAGGTA TTGACTCCGT GCAACAACTT TCAGAGAGAG AAGTTGGCAT CATGAATGGT 
CTGCTTGATG AGGGAAAAAT GTATCAAGTC CCAGCAGCAT GTCTTGATGA TTACTATTGG 
ATGCTGGCTA GCGTTGCAAA TCAGACTGAG CATCAACTGC ACGTTTCGAT TGACAATAGA 
CAGCGTCGAT TTCCAGGTCT CCGTCCCATG CTTGTCACAA ATGATCAAAT GCGCGATCAC 
AAGCTAGCGC TTTTGGAAAA ACGGCTCTTT CGTCGATGGA CGAGTTGCCA CATTGTCAAC 
TATGATCTTG AGTCCTATTC TGAAAATGAA TGGCAAGATA GGGATGTTCG CTTTGTTCCA 
ACTGATTTCT TCAGCCGAGA GATTCAGGGC AACGAAGTAG GTGGGGAAAG AAGCAGCACG 
GTATGGCACT ACCCTGTCAC AGGCTGGGAA GGCAGCGATA GACTTTGCAT AAATATTCGC 
CGGTAA 

 

Protein sequence

MGKGKRPSIS LFAFLQATFS VVSIQAFQMP TTCRTMSTVV SYRETYPQHP CFSQQRYNSH 
ICMEPGIIQV EELSDQDTFC SYINCMKEIV ENQRVVKKCS LDECKPVQEY LFSSQSLLSL 
PDISVDGFKD RLRDQKRQFL EETGFSEEQY EYLVRCLAYL GDRCAKIQQI APALIAWKKM 
RESGMKPRER FVSTYMYVLS LDERNVQACF ETATFHDVLF EPTEKSIFLR IKTLISQSDA 
KTAEYILSSL PDRQGKSSEW KKLRTFLPIL SHYCDVGDMI SALNLFRKMR KSEGVIFDSE 
TYGLLIGALA RRGYFIPGGL SVDGASTLGS LEMGGPALFD TISTEMAEDL LELSLDAAET 
ILDGFVSGFA GENSYEFDCV TDKCINVSPL LTIGRVTVNE TSAVCPATGA NLRLFALTEE 
QRISVHDTLL EMAAVQHEDF SEKLKARNQN FKGRGDSERA RRNLFEFSEW LREHEGEPFT 
AIVDGANVAY AGHGNVHYSQ VQLVVDKLED MGEKVLVVMP SKYVGEKFYV AGIDSVQQLS 
EREVGIMNGL LDEGKMYQVP AACLDDYYWM LASVANQTEH QLHVSIDNRQ RRFPGLRPML 
VTNDQMRDHK LALLEKRLFR RWTSCHIVNY DLESYSENEW QDRDVRFVPT DFFSREIQGN 
EVGGERSSTV WHYPVTGWEG SDRLCINIRR