Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47239 |
Symbol | |
ID | 7202208 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 895262 |
End bp | 897098 |
Gene Length | 1837 bp |
Protein Length | 564 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181465 |
Protein GI | 219122254 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.403327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATCA ACAACGCCAC CGAGACCAAG TCTCGCAAGG ATCGTCCTGC TGGATCCATC CATTTCGGCG ACACCGACTT CGATGTCGAC GAGCAAGCTG GAGCCGCTTC GTGGGGCGAA GTATGCCACG CTTGTTGTGT CCATTCTGGA CAGGAATGGG CCATGATCGC TCTTGGGATC TTCCTGGTTT GCTTCTTCCT CTACTTCTTC CTGGTGGGTC TTGACTTGCT TGGAAACGGT GCGAGGGTTA TGACTGGATG CACTGCCGGA GAGTTGTTTG GTGACGACAC TAATCCCATT GCTGGTCTGA TGATTGGTAT CCTTGCGACC GTATTGCTCC AGTCTTCTTC TACGACGACC TCGATTGTTG TGTCGTTGGT TGGTTCCGCT GTCTCTGTCC GTCAAGGAAT TTACATGATC ATGGGAGCAA ACATTGGCAC TTCAGTAACC AACACGATTG TTGCTATGGG TCAGATGGGC GATGGAGATC AGCTGGAGCG TGCTTTCGCT GGTGCCACTG TCCATGATAT GTTTAACTTT TTGTCGGTGG CTGTACTACT CCCTGTAGAA GTCATCACAG GATATCTTTA TCGGCTTACC AAGGCAATTG TCAAGGATGC CAATCTCGAA GACGGTGAAA GCTGGGATGG TCCCATCAGT AAGCTGGTTG ATCCTCTTTC GGAAAAGATC ATCATTCCCA ATAGTAGTAT TACCCGGGCT ATTGCTTTGG GTGACGCAAC CTGCAATGAC GGCGGCGGCT TCTACCCCAT GAATTGTACG GAAGACACGT ATTTGGGTTG TGGCGGCGCA TTTGGTCTCA TTGCCTGTAG CAGCGATAGT GGTAAATGCC CTGCTTTCTT TCAAGGTGAC GCTTCGGCAA GGGATGACAA GGTCTCTGGA GGTGTTGTCT TTTTCATTGC TATTGTCGTC CTTTTTGTTT GTCTCGCTGG GCTTGTAACT GTTCTTCAAA AGTTACTGCT TGGTATGTCC ACTCGCGTTG TCTACAAAGC CACTGATATA AACGGATATC TTGCGATTGC TATTGGTACT GGTCTGACCA TGCTTGTGCA GTCCTCCTCC ATTACTACGT CCACTTTGAC TCCGTTGGTT GGTATAGGAG CGCTTCGTCT TGAGCAAATG TTGCCCCTTA CACTTGGTGC TAACATCGGT ACAACTCTGA CTGCCATTCT GTCTGCCCTC GTGTCTGCCA GCAAGGATTC GCTCCAGGTT GCACTTGCCC ATTTGTTCTT TAACTTGACT GGAATTCTCA TCTGGTACCC TGTGCCTTTC ATGCGTCGTG TCCCTCTCGG AGCTGCTCGT AGACTTGGAA AATTGACGCG AATCTGGCGT GGTTTCCCCA TTCTTTACAT TGGAGTGATG TTTTTTCTCA TTCCGCTTCT TCTGCTTGGC CTGTCGTCTC TTTTCGATGA TGGCAGCACT GGTTTTACTG TCCTGGGATC CTTTCTTACC ATCCTTTTGT TCCTTACCAT TCTTTACGCT GTCTACTGGT TCCGTTACAG AGACGGTCGG CAGAAGTGCT CAAACAGCAT GGCCCAGCGT GAGAAGAATC GCGTCGTAAT GAAAGAACTC CCTGACGACA TGGTGTATCT AAAGGAACAC ATAAAGCGTC TTATTGAACA CACTGGACTC CCCGAAGACG AGGATGTCCA GCCAAGTATG AATCTCCTGA TACTTCGGAT GCTGAAGTTG ATACCTAAGC ATCGTGTGAG AGATCGATGT CGCTGTGTAT CGGTTGGAGG ATCCCTCTTG ATTATTTGTT TAGTATATAC TACATACAAT CTGTGCCAAG AGTATAGTTC TCGCAGATAC TGTTTGA
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Protein sequence | MEINNATETK SRKDRPAGSI HFGDTDFDVD EQAGAASWGE VCHACCVHSG QEWAMIALGI FLVCFFLYFF LVGLDLLGNG ARVMTGCTAG ELFGDDTNPI AGLMIGILAT VLLQSSSTTT SIVVSLVGSA VSVRQGIYMI MGANIGTSVT NTIVAMGQMG DGDQLERAFA GATVHDMFNF LSVAVLLPVE VITGYLYRLT KAIVKDANLE DGESWDGPIS KLVDPLSEKI IIPNSSITRA IALGDATCND GGGFYPMNCT EDTYLGCGGA FGLIACSSDS GKCPAFFQGD ASARDDKVSG GVVFFIAIVV LFVCLAGLVT VLQKLLLGMS TRVVYKATDI NGYLAIAIGT GLTMLVQSSS ITTSTLTPLV GIGALRLEQM LPLTLGANIG TTLTAILSAL VSASKDSLQV ALAHLFFNLT GILIWYPVPF MRRVPLGAAR RLGKLTRIWR GFPILYIGVM FFLIPLLLLG LSSLFDDGST GFTVLGSFLT ILLFLTILYA VYWFRYRDGR QKCSNSMAQR EKNRVVMKEL PDDMVYLKEH IKRLIEHTGL PEDEDVQPIL ADTV
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