| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47193 |
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| Symbol | |
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| ID | 7202185 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011680 |
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| Strand | - |
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| Start bp | 765866 |
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| End bp | 768850 |
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| Gene Length | 2985 bp |
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| Protein Length | 709 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181441 |
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| Protein GI | 219122204 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0349401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTCTGTACG CGGGGTTGTG GAGGGGTAGG AGGGCGGGCA TCGTTTAGAG TGCTTTTTCG
GTGAACGGTA ACTGTAAGGT AACCTCGGCG AATTCTCGTC CCCCGTATAG TATCGAACAG
TAAACGCCGT AGCTTGACCT CTCGACGTGT TTCTTTCACC ATCCCGGTCA TCGTAGTTGC
AGTTCCTTCC GTGATCGATT CCCACACACG ACCTCACTAC CAGTCGTTCT TACTCGAAAC
CGTTCAACAT CCACCGACTA TCAACGTAGA AATAGCGGTC CGATTCTTCG TCGTGGGAGA
AAATCATCAA ACGCAAGATC TGGGTTGTGG ATTCCTGGAT TTGCGCTCAA AGTTTTTGCG
TTTCCTCGTA ACGTAGAAAC TTACCGCAAC ACATCACAAT CATGTCCGCT TTCCTCAGGC
ACTGCAGTTC CTGGTTGCAA CTAGTCCTAT GGGTATTGTT ACCTAGCTTG CTTTGGAAAA
CCGACGCCTT TTCCACCCAC AAACCATTCG TGACGATGCC GTTACTGGTG GCAACCGACG
GGTCTCCCGC GTCTCGACAA TTGAGTCCGG CATTACGGCA ACAGTCTCCA CGCCACCAAA
AACTGCCGCT CGGAATTGAC AGTGAGCTAG AAGCACACTC GCGTCGCTTC CAGATGCTCT
CGAGTAGTAC ACGCACGACA CGACGTTCCG CAGTTGCGGG TGAAGGCAGC GAAGAACGAT
TCCGCAACGG CAGCAGGACT CCACCACCGC CGCCGAATGG GGAAAACTTG ATCTCGGCGA
GTGCGGCAGC GGCGGAACGC TTCGCCAAGG CGGCACCTCT CGACGAAATT GCGCCTTCCG
CACCGGGCAG TAAGCTACGC AAACTCAAAG ATCTCATGTG GGTCCGGGAA GCTCTGGAAG
ACTTGACGGC GGCCGAATTC GCTTGCACGG TGGAGGCCTC GCACCACAAA CAGGACGAAA
CTGTGTCTCG GCGACGCAAA CGCGCCGTTG ATTACGAAAA ATTACTCGGA CAGCTCAATC
GCCGGATTCG CGATTTGGGC TGTGAGCCTG TAGAGGCTCC CAAGACGAAC GACGACGAGG
TTACCGACGA AGCTGTCGTT CCCAGTGGAC AAGTGGAACC GGATGTGGGT GCCGGTACGC
TCGTCTACTC ACTCAAACAA CGTCAGGCTT TATTGGATCG TTTGTTTCGT ACGCGTCAAC
TTCTCCTGGA AGTCATTCAA GGCTACGAAC TGGAAATCGA TCCGATGGAT TCCTTTACCA
TCAGTTTGCC TTCGATTCGC GTAGAAATCC CACGAGAAGA AGATCCTTCC TCACCCGGTC
CCAAATTGTA CGTGCGCGAT GATGGTACCG TTGACTGGGA CGGAGCATTA CAAGACCAAG
CTGCCATGAA AAAATTCGGA ACCGCGGTTT GGGCACGCAT CAATGGACGA GATCCTGAAT
CTCTCGACGG TGAACAGCGC AATCCCCAAA ATGCCAATAT TGGCTCATCT GCTGTCATTG
ACGCAGAAAT CGAGTCGGCC ACGGGCGCTG CCGTTGTGGG AGAAGTTCGT GAGGTCGAAA
AGCCAACCGT GACGGCCAAA ATTGAAGAAA CTCCAGAAAT AATTAGGGCT CGTCAACGCT
TGGAGATCCT CACCGCGGAT TTGGCCAAAA TGGAAGCGGA TTACATTGCG CTGATCAGCT
CCGCCATTGC TCCGGGACAA GCTGTGGCCA ACGTCAACCT AGCCAATCTC GAGCCTGCGC
AACGTAGCAG AATTCGTGAA TCCACCGAAG GCATTGATGT TATGAAGGAA AAGGTCTCGT
TTCAAACTCT AGTGTACGAA CTCGAAAGGG TATACACTTA TTTAGTGGGA GAGATGGGTA
ATCCTGCCCA AAATGGGTAC ATTCCATTGC AAGATCGATT GAATGTAGCA GAATTTGGGT
TGCTAGAATC TCAAATTGAT AGCTTCCATC GACAACTGGA CGAGGGTAGC TCATCGCTCG
ATACAGACGT CATGGCGGTC GTCTTGGAGC AAATGATTGA TTTTAAACGA CGATTGGGAA
TCGACTACTT TGTGGCTGGT TTGTCGTTTG ACAGGGACGC GATAAAACGG TATATGAGTG
AATTACTGGA AAAGACCAAG AAAGGTTTAG CCTTTTACGT CAAGGGCGTT CGCCTCTTCT
GGAATGATAT CATATTTTGC TTGAGTCTGA TCAACCGCGC CGCACAAGGG TATACTCTCA
AGCCTCGAGA AGTACGCACA ATTCGGTACG TATGGGTTGT CATTTATGTT CCGTCGCGGA
TATGCTGAGC TTTTTCTCAA ACGTTTTTTT TCGTTTTGGA CAGACGAACC TTCAAGGATT
TTTTTACATT TATTCCGTTT GTGATTATCT TGTTGATTCC GTTGTCGCCC ATCGGCCACG
TTCTTGTCTT TGGTGCTATC CAGCGATTCT ACCCCGACTT TTTCCCCAGT TGCTTTACCG
AGCAACGTCA GAACTTGCTG CAGCTGTACG AGAACGCTGA ATACAAGGAG TTTACAATTG
ATGAAAACTG GAAGGTAAGT CTCCGTTTGT TGCCCTTGGC ACAAGAAAAT GGACAAAAAC
GTTGCCGTCC TTTCGACTTA CACTGGCATT CGTCGGTAGG AAAAAATGTC GCGAATGTCG
GAAGCTGCCG TTTACTTTGG AGCCAACACA TCACGAGCAT TGTTTGAAAA GATGGCCAGC
ATGGTCCGGG GACAGAGTGG TGCAGCTACC GACGCCACTA CCGAGAAGAA TGGAAAAGAG
CAATAACGAC GGAATATGCT TATCTTTTGC GTGTAAATGA ATTTAGTGAA ACAGACGGAC
GAATCCAAAC ATGCTCACAT TCAAGACTTT CAGAGCCACC CAATGACTCA ACTTGCAAAC
TCCGATCCCG ACTACACTAC CTCAGACTCT ACAAGAAAAT GTGGCAGTTT GACTCCAGAC
CAAATCTACA TCGTTGTTTT CACATCGCGA GTTGATTAAA AGCTT
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| Protein sequence | MSAFLRHCSS WLQLVLWVLL PSLLWKTDAF STHKPFVTMP LLVATDGSPA SRQLSPALRQ
QSPRHQKLPL GIDIAGEGSE ERFRNGSRTP PPPPNGENLI SASAAAAERF AKAAPLDEIA
PSAPGSKLRK LKDLMWVREA LEDLTAAEFA CTVEASHHKQ DETVSRRRKR AVDYEKLLGQ
LNRRIRDLGC EPVEAPKTND DEVTDEAVVP SGQVEPDVGA GTLVYSLKQR QALLDRLFRT
RQLLLEVIQG YELEIDPMDS FTISLPSIRV EIPREEDPSS PGPKLYVRDD GTVDWDGALQ
DQAAMKKFGT AVWARINGRD PESLDGEQRN PQNANIGSSA VIDAEIESAT GAAVVGEVRE
VEKPTVTAKI EETPEIIRAR QRLEILTADL AKMEADYIAL ISSAIAPGQA VANVNLANLE
PAQRSRIRES TEGIDVMKEK VSFQTLVYEL ERVYTYLVGE MGNPAQNGYI PLQDRLNVAE
FGLLESQIDS FHRQLDEGSS SLDTDVMAVV LEQMIDFKRR LGIDYFVAGL SFDRDAIKRY
MSELLEKTKK GLAFYVKGVR LFWNDIIFCL SLINRAAQGY TLKPREVRTI RRTFKDFFTF
IPFVIILLIP LSPIGHVLVF GAIQRFYPDF FPSCFTEQRQ NLLQLYENAE YKEFTIDENW
KEKMSRMSEA AVYFGANTSR ALFEKMASMV RGQSGAATDA TTEKNGKEQ
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