Gene PHATRDRAFT_47123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47123 
Symbol 
ID7201922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp522553 
End bp523514 
Gene Length962 bp 
Protein Length291 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181394 
Protein GI219122106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGCATCTGAA ACTCCGATGT GCACAGGCAG TTCGAACACT GTCGGTGAAC CTCAAATACT 
GATTTAGCAC ACATTTCAAA GCTGAAATGT CGAACGAATG GATCTCGGTT TCTCGCGATG
ACAAGAAGCG TGTTATGCGA AAGGGGGCTG GGTGGCGACG GCGTCGTCCT ATGACAGCAG
CCAGTAAAGA TGCACGTTAC GCAAATTCAT CAATAGACGA TTATGTCCAC GATCAAAAAG
TGATGCTCTC CATACTTTCC GATTGCCAAC GTGTTCTTGC TTCGAGTAGA TTTCATCAAC
GTATTTTCGA TGTATGTGGC ACTTCTTTTG CTCATTCCGA CACGTCACCA GCATGCCTGC
AGATTATATG CTACGGTATC GGAAACTTTT CTCGAACCTC ATCTACAAAC TATTCCTCCT
CTCTGTGGCA GCTGGCAGAA GTATTGTGTC TTCGTCAGGA GTTACAAGGC AAAAGTGCTT
ATTCGGTACC TCTCTACTTT TACGATCCCT GTTCAACTAA CTTTGAACAA GTCTTTTTGA
TGGAGCGGTT GCAAGTCGAG GTTTTGGCAG ACAACGATCG AGGAAGGCGG GCTATAGAAG
GAAATCCGAC ACTTTTCTAC ATGCCTCATT GTCCGGCGAG ACTTTACGAA AATGTCTTGT
CAGCCAACTG GGACGAGCTT CACTCTGAAA CTTCAACGCC TTTATTGATT CTGGGGAACT
CGCTTCGAAA TTATTGCAAT CCACTATATA CCTTGAAATT CCCTTGTATG AAATCGCTTT
TGCCGTACAC AACAGAAATT CGGCTGGACG ATAAGACTCT TGATGATTGC AAGATCGCAC
CTGGCAACAT TGTCGGAGCC TTCAATGACA CCTATTTGAC GTTGTTCGCT TCTGTCATCA
AACTAGGGCC TCAGCCTACC TCGTCGCCAG AAAGAGATGA TGAAGACCCG GAACTTCTGT
GA
 
Protein sequence
MSNEWISVSR DDKKRVMRKG AGWRRRRPMT AASKDARYAN SSIDDYVHDQ KVMLSILSDC 
QRVLASSRFH QRIFDVCGTS FAHSDTSPAC LQIICYGIGN FSRTSSTNYS SSLWQLAEVL
CLRQELQGKS AYSVPLYFYD PCSTNFEQVF LMERLQVEVL ADNDRGRRAI EGNPTLFYMP
HCPARLYENV LSANWDELHS ETSTPLLILG NSLRNYCNPL YTLKFPCMKS LLPYTTEIRL
DDKTLDDCKI APGNIVGAFN DTYLTLFASV IKLGPQPTSS PERDDEDPEL L