Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47115 |
Symbol | |
ID | 7201917 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 502610 |
End bp | 503991 |
Gene Length | 1382 bp |
Protein Length | 407 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181389 |
Protein GI | 219122096 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.395263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TATCAATGGA AATCTTATGT TGTGATTCTC TCTTAAACGC TCTTTCATGT TCCGCGTTTT CATGTCTCCT TCACGTACAA GATTTCAATC AATTGCCTGC GATCTTCCAT CGGCTTCCAA ACGAAGCTTT CGATTTCCTT TTCGGACTTC GTTACATAGC AATCGATGCT TACAAATGCA TGGAAAGTTG TCAGCCCCGC AGCAGCATCG AATCTATGAT GACCTCAAAT ACACCCAAGT CAAACGTTTC TAGAGCTTGC CGATGTCTTT GCGGAAGTAC TATAATTTGT CTGGTTCTAG CTGGTCTCGC AATTTTCTTG GCCATCCGTT TTACAGATTC GGATTCCCCA GGCGATGTTT TGCCCGATGA TTGGGAAGAC CTTTTCGACG GTGAAAACAC ATTCAACGCC ACCGGTCCGG AGGATGCACC TCGGTGGCAA AACGACGGTA ACGGTCTCTC TCTTCAAATT ATTCAGGCTC TCGACGAACG CTGGATGCCA TATTTTGAGC GCTCAGTTCG TCAATGGGAT ACGGGTAAGC CGAGCGTTTT AGATTTATTC TCTGTGCCAG TTGCGCAAAG CTCGGAAGTT TCCAGCTCTT GCGGGCCAGT TGAAGGATCT TTGAAGGTAT GCAACGGAGA CTATGGGGAA ACTGGATGGA ACGGAATCAA CGAACTGCTC TTGCTGGATG AGAGGATAAT AATAGCAAGC ACAGCCAAGA TGAATGACTA CTATCTTGCA GACGCCTCCG ACAACAGAAA ACAGTACACG ATGTGTAAGA TTTGCTCGGA GTCTTCGAGA ATTGGTGTCT TTATCGGAAA CATCTGACAA GTTGCTTGAC TTTTTGGAAA CAGGTCATGA AATAGGTATG TCTTGAAACC TGGGGTCTGC TAAAAACAGA AAAAGGTTTT TTTACAAATA TCTTCTATTT ACCTCACAGG GCACGCTTTT GGACTACCAC ACACGAACGA AGACTTTCGT AACGAAAATA CAGGAGAATG CATGGACTAC ACAAACGATC CAAAAGTGAA CATGCAGCCC AATCAAGAGA ATTTTCTGTT CCTGAGCGAA ATGTACGGTA GGCTACCAAG CTCGGGTGGA GTAGATGATA GTGATGAACC GTCCAGAAAT CAATCTTCCC CGACTTCTCA GTTGCCTGAA GGCAATCGGA AACGTGCTCG AGATTTGCGT GGTAGTCGCC GATTGTTGGA ACACTCCATC CGTTACGCCC GAGATACGGT ACTTCCGAAA ATAGAAAATC GAACTGACGG CAAGGAACAC GAGGATGGTT GGCTTCTTCT GCATCGCTCG GCTCAAGGTA GCTTGCACGA GTTTCCATTG GGCCCAAGAA TTAGTCTGCG TGTGCGCAAA CTATTCCCTT AA
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Protein sequence | MEILCCDSLL NALSCSAFSC LLHVQDFNQL PAIFHRLPNE AFDFLFGLRY IAIDAYKCME SCQPRSSIES MMTSNTPKSN VSRACRCLCG STIICLVLAG LAIFLAIRFT DSDSPGDVLP DDWEDLFDGE NTFNATGPED APRWQNDGNG LSLQIIQALD ERWMPYFERS VRQWDTGKPS VLDLFSVPVA QSSEVSSSCG PVEGSLKVCN GDYGETGWNG INELLLLDER IIIASTAKMN DYYLADASDN RKQYTMCHEI GHAFGLPHTN EDFRNENTGE CMDYTNDPKV NMQPNQENFL FLSEMYGRLP SSGGVDDSDE PSRNQSSPTS QLPEGNRKRA RDLRGSRRLL EHSIRYARDT VLPKIENRTD GKEHEDGWLL LHRSAQGSLH EFPLGPRISL RVRKLFP
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