Gene PHATRDRAFT_47115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47115 
Symbol 
ID7201917 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp502610 
End bp503991 
Gene Length1382 bp 
Protein Length407 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181389 
Protein GI219122096 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.395263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TATCAATGGA AATCTTATGT TGTGATTCTC TCTTAAACGC TCTTTCATGT TCCGCGTTTT 
CATGTCTCCT TCACGTACAA GATTTCAATC AATTGCCTGC GATCTTCCAT CGGCTTCCAA
ACGAAGCTTT CGATTTCCTT TTCGGACTTC GTTACATAGC AATCGATGCT TACAAATGCA
TGGAAAGTTG TCAGCCCCGC AGCAGCATCG AATCTATGAT GACCTCAAAT ACACCCAAGT
CAAACGTTTC TAGAGCTTGC CGATGTCTTT GCGGAAGTAC TATAATTTGT CTGGTTCTAG
CTGGTCTCGC AATTTTCTTG GCCATCCGTT TTACAGATTC GGATTCCCCA GGCGATGTTT
TGCCCGATGA TTGGGAAGAC CTTTTCGACG GTGAAAACAC ATTCAACGCC ACCGGTCCGG
AGGATGCACC TCGGTGGCAA AACGACGGTA ACGGTCTCTC TCTTCAAATT ATTCAGGCTC
TCGACGAACG CTGGATGCCA TATTTTGAGC GCTCAGTTCG TCAATGGGAT ACGGGTAAGC
CGAGCGTTTT AGATTTATTC TCTGTGCCAG TTGCGCAAAG CTCGGAAGTT TCCAGCTCTT
GCGGGCCAGT TGAAGGATCT TTGAAGGTAT GCAACGGAGA CTATGGGGAA ACTGGATGGA
ACGGAATCAA CGAACTGCTC TTGCTGGATG AGAGGATAAT AATAGCAAGC ACAGCCAAGA
TGAATGACTA CTATCTTGCA GACGCCTCCG ACAACAGAAA ACAGTACACG ATGTGTAAGA
TTTGCTCGGA GTCTTCGAGA ATTGGTGTCT TTATCGGAAA CATCTGACAA GTTGCTTGAC
TTTTTGGAAA CAGGTCATGA AATAGGTATG TCTTGAAACC TGGGGTCTGC TAAAAACAGA
AAAAGGTTTT TTTACAAATA TCTTCTATTT ACCTCACAGG GCACGCTTTT GGACTACCAC
ACACGAACGA AGACTTTCGT AACGAAAATA CAGGAGAATG CATGGACTAC ACAAACGATC
CAAAAGTGAA CATGCAGCCC AATCAAGAGA ATTTTCTGTT CCTGAGCGAA ATGTACGGTA
GGCTACCAAG CTCGGGTGGA GTAGATGATA GTGATGAACC GTCCAGAAAT CAATCTTCCC
CGACTTCTCA GTTGCCTGAA GGCAATCGGA AACGTGCTCG AGATTTGCGT GGTAGTCGCC
GATTGTTGGA ACACTCCATC CGTTACGCCC GAGATACGGT ACTTCCGAAA ATAGAAAATC
GAACTGACGG CAAGGAACAC GAGGATGGTT GGCTTCTTCT GCATCGCTCG GCTCAAGGTA
GCTTGCACGA GTTTCCATTG GGCCCAAGAA TTAGTCTGCG TGTGCGCAAA CTATTCCCTT
AA
 
Protein sequence
MEILCCDSLL NALSCSAFSC LLHVQDFNQL PAIFHRLPNE AFDFLFGLRY IAIDAYKCME 
SCQPRSSIES MMTSNTPKSN VSRACRCLCG STIICLVLAG LAIFLAIRFT DSDSPGDVLP
DDWEDLFDGE NTFNATGPED APRWQNDGNG LSLQIIQALD ERWMPYFERS VRQWDTGKPS
VLDLFSVPVA QSSEVSSSCG PVEGSLKVCN GDYGETGWNG INELLLLDER IIIASTAKMN
DYYLADASDN RKQYTMCHEI GHAFGLPHTN EDFRNENTGE CMDYTNDPKV NMQPNQENFL
FLSEMYGRLP SSGGVDDSDE PSRNQSSPTS QLPEGNRKRA RDLRGSRRLL EHSIRYARDT
VLPKIENRTD GKEHEDGWLL LHRSAQGSLH EFPLGPRISL RVRKLFP