| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47110 |
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| Symbol | |
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| ID | 7202024 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011680 |
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| Strand | + |
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| Start bp | 470153 |
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| End bp | 473052 |
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| Gene Length | 2900 bp |
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| Protein Length | 907 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181212 |
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| Protein GI | 219121727 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0847586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TGAAGCAAAA GTGACAACTG GAGGGATCCG TTTCGTTCGA CGCAGCCGTG CTGTTGCACA
TTAGTATTGA TATTCTCTTG ACTATCGCTC GTTGCGTGAA TAAACATGCG AACACGGAAC
CAGAGACAAG ACGGTGCAGA TGATATTATG AGCAAAGTCA ATGCCACTGA CAGTCGTCAT
CGCCGACAGG ATTCTAATAT CAAAGACAAC GAGCAAACAC CAATCGTCCT GCCAAACAGA
TCCATCGACG GCTTTACTGA CGACTCATTC CGTGTAACGC AGACACGAAA GAGAATTTTG
CGGCAAGGTG TTGCTCCACA AGTAGCGGAA GGCAGTGGAG ACTGTGAGCA GAAGGAAAAA
AGCAAGACTC GTGGTAAAAT TAGCAGACTT GGTGCAGCTG GCTTTTACCT AAAAGCGTGT
CATCAATCGG GATATGTATT ACAAGCAATA ACGTGGGCCA AAGCTCGTCC GTTTGTTGTC
GGAGCCATGC TATTTTCCAT TCCTTTTATT TTGCGGCCGT CTCGCTTTGG GCGGTTCTTA
AGCTTTATTG GCCTGATGCG TTGGTACCCC GCGTATTTTG GAAACCATCC AATAGCGGGA
GGTCCGTTAG GCCGTAAAAT CGATTACAAC TATCTTACCA AAGTATACGA AAGGACTAAA
CGAGAAAATC AAGAGAAGCT GGGAAAATTG GGGATTACAG AGCTGCCCTA TATTGAAACA
TTGAATGCAA AGGAGCAAAT CAACGTTTTG AATTTGAACA CGCGAGCGGC GATACGAGAA
CTTTTAGTTC GACGAGAAAG ACGTGCTGTG ATGTGGAATG AATTAGAATT GCAATCACAA
GGCTTAAAAT TGGCTACCGA CTGCAAACAG TGTGACGGTG TGGCGGGTTG CTTAAATCCT
TGCGGAATAC CTCGGATTCT TTTGCTTCCG CAGCTCCACA ATTGGGAACC GCCGCGGCCA
GGTCTAATAT CCGGCGCCAA CTTGATCCCC TTCACATTTG ACGAAACCGA AGTGCGCGAT
TTCTTGTCTG TCGCTCACCC GCAGCTTCGG AATCATACCA AGCAAGAGAC CAACGTTTCC
ACGACGGTGT GGGCGCTAGC AGCCTTGACT TCGTATGGCG GCGTCTTTCT TGGGGATCAG
CGTCGCTCTA AGATTGATAC AGCGAATAAA GTCCTGTTTG GGGGTTCGAA TCGTGGGATC
CTTGATATAG CCTTACGAGA TACGCCGGTG GCCATCGTTT CCCTAGAGAG AACTGGAACC
GATTTTCGTC TCAAGATGCT GATGACTACA CCAAACCATC CTTTCTTAGA ATGTGCTCTT
GGCGAGTTGC AAGCAATGAG CCTTTTAAAC GTTCCACAAC TGTGGAGAAT GCTCATGGTC
TCTAAAGAAC CTTCGTTCTA CGTCGATGAA GGTTGGAAAC GGGCGTTAAT AAATTGCCCT
GCAAAGAAAG AGACTGGATG CTGTCACTCC AATTCTTTGG TTTCCGTCAC AGACGTGGCC
GCGGATTATG AAAGCCAAAT GCTGAAAGTC GGCAAAAGTG TGGTATATGT GCAAATAGTG
AAAGAAGAGA TATTGGAGGT TAGGTCAGCA AAAACAGCCC AAGTTGAAAT ACAACATACT
TCGCGGGCAT CAACTGAACC CTCTACAAAG GTTCGGTTGG AAACGCTTTT GCGCCTTCAT
AAAGCCGACC CAGGATGGTT GTGTACTAGG TGCATCAAGA CTCCATGGTA CGGCTCCATG
GAAAAATGTT CGTTCTTTTG TCCAACAAGG TACGAAGAAC TCGTTTGTCG GTCTCCGGAT
AAGCCTCCTA GACGCGAAGT CCCAGTAGAT GTGAATGTTT TGGTTCCTTC CCAGCCATCA
GCCCAACGTA TTCCACGCAT TATACATCAG ACCTGGTTTG AAGACCTCAC GATAGACCGA
TACCCGCAAC TTGTAAGGTT GCAAAACTCT TGGAAACAAA GCGGTTGGGA GTATCGATTT
TACGACGATG CCGCGGCAAA GGAGTACGTG ATCGAAAACT TCCCCTATCA CTTTGCTGAA
GCTTTTGACA GTTTAATTCC TGGAGCTTAC AAGGCCGACT TTTTTCGGTA TCTTGTGCTG
ATGAAGACGG GGGGTGTATA TGCTGATGTG GACGTTATGC TCGACACAAA TCTTGATTCA
TTTATCACTC CATCCATGTC CTTTTTTGCG CCAAGAGATA TCGTGGGTGA ATACGCAGGA
CAGCCATTTT GCCTTTGGAA TGGACTTATC GGTAAGTCGA GTGTGCCAAA TTATTGCGAG
TGCAATGCTC CAAGCTGTTG CTTACATATT TAATATTCAC AGGAGCCGCT CCAGGGCATC
CGTTTCTGAT ACGAGCTGTT GAACGTCTTG TAAATCTTAT CTTGGATCGC TCAGACTTGT
ATGACATGGA ACGCGATATT TGTCGAAGAT CGGAAAAACC GATAGAGCTT TGGAAAGTGA
GAGCAGAGCC TTTGCTGCTT TTTTCGGGGC CATGCGCCCT CGGCGTTGCC GCAAACGAAG
CTTTGAATCG ATCGTCACTT GAGCCATTTG ATATAGGATG GATCAGCATG GAAAATCTTG
GTTTCGGTGG GAAAGATGAT CATGGTGATG CTCTGATTTT GGTGGGCGAC AAATTTGACA
TGGGCGCCTT TCGAATTTCG GACCCGGAAA GAAATTTTGT TGTTGCTTCA ACAGACCTGG
ATGGAGTGGA AAAAAAAGCA AGGATCATGG CGAATCCAAC GATAGTCGAA CGGAACTTAA
ATGACACACG ACAGAAGCAA CTACCGCACT ACAGTAAAAC AGCAAAGGGA GTCTATGTCT
GGGGAAGTGC TCGTGTCTAC AAAGACAATG AAGTCGCCAA CGAAAAAATT AAGTTTTTCC
CTCAATACCA TGACGAGTAG
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| Protein sequence | MRTRNQRQDG ADDIMSKVNA TDSRHRRQDS NIKDNEQTPI VLPNRSIDGF TDDSFRVTQT
RKRILRQGVA PQVAEGSGDC EQKEKSKTRG KISRLGAAGF YLKACHQSGY VLQAITWAKA
RPFVVGAMLF SIPFILRPSR FGRFLSFIGL MRWYPAYFGN HPIAGGPLGR KIDYNYLTKV
YERTKRENQE KLGKLGITEL PYIETLNAKE QINVLNLNTR AAIRELLVRR ERRAVMWNEL
ELQSQGLKLA TDCKQCDGVA GCLNPCGIPR ILLLPQLHNW EPPRPGLISG ANLIPFTFDE
TEVRDFLSVA HPQLRNHTKQ ETNVSTTVWA LAALTSYGGV FLGDQRRSKI DTANKVLFGG
SNRGILDIAL RDTPVAIVSL ERTGTDFRLK MLMTTPNHPF LECALGELQA MSLLNVPQLW
RMLMVSKEPS FYVDEGWKRA LINCPAKKET GCCHSNSLVS VTDVAADYES QMLKVGKSVV
YVQIVKEEIL EVRSAKTAQV EIQHTSRAST EPSTKVRLET LLRLHKADPG WLCTRCIKTP
WYGSMEKCSF FCPTRYEELV CRSPDKPPRR EVPVDVNVLV PSQPSAQRIP RIIHQTWFED
LTIDRYPQLV RLQNSWKQSG WEYRFYDDAA AKEYVIENFP YHFAEAFDSL IPGAYKADFF
RYLVLMKTGG VYADVDVMLD TNLDSFITPS MSFFAPRDIV GEYAGQPFCL WNGLIGAAPG
HPFLIRAVER LVNLILDRSD LYDMERDICR RSEKPIELWK VRAEPLLLFS GPCALGVAAN
EALNRSSLEP FDIGWISMEN LGFGGKDDHG DALILVGDKF DMGAFRISDP ERNFVVASTD
LDGVEKKARI MANPTIVERN LNDTRQKQLP HYSKTAKGVY VWGSARVYKD NEVANEKIKF
FPQYHDE
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