Gene PHATRDRAFT_47109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47109 
Symbol 
ID7201912 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp467413 
End bp468231 
Gene Length819 bp 
Protein Length173 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181384 
Protein GI219122085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT TGACTCTCCA CCCAGCAGCC AACTCTTTCC TGTTCACAAC GTGAAGTACA 
ACACTGGCTC AGATATTGGG CTGCGGTGAC AAACAGGAGA AAGTGCAGAA AGCAACGCTA
GGCTTTGACA GTAAGGGGGA TCAGCATGAA GTCATCCTGT CACAAAGGGG GTTTGTTGGG
ATCAGCTTTT ACTCGCAAGC CGCCGAAGAG ATTTCTGACA ACGAAGAACC CCACGAGCCG
TTGTTCTCGG GCAAAGCTGC GGGTGAGCAA GCACTCGGTC CGGCACAGTG CATTCTAGAA
AAAAAGATGT TCTCGCTGTC CGGGCACGTT ACCAAGCCTG TCAGCCTGAA GAAGATTCGT
AACGTTTTAC CAATCCTATT GCACGGAGAC GCCACCTTTG CCGGGCAAGG TGTAGTCTAC
GAGACCATGC AAATGGCCGA GGTGCCCGAT TTGATGTTGG TGGAACCATT CACGTCATTA
TCAACAATCA GATTGTCTTC ACCACCAACC CCCTACATTT GCGCTCGACG CCCTACTCGT
CGGATTTGGG CAAGGCCTTC ACTTGCCCCA TCTTTCACTG CAACGGCAAT GATCCCCTAG
CAGTATCGAC GGCACTCGAG ACCGCCGTCG AATGACGTCA CGAATGGGGC ATGGATGTCA
TTATTGAGAT GGTCTGCTAC CGTTGTAATG GTCACAACAA ATTGGATCAG CCGGCCTTTA
CGCAACCCAA ACTCTATAAG GAAATCTCTC AACACCCACC AACCCTGGAA ATTGTCGAAA
AGTGATTGAT TGAAGAAGGA ACCTTATCCA AAGAAGAAT
 
Protein sequence
MKFLTLHPAA NSFLFTTKGD QHEVILSQRG FVGISFYSQA AEEISDNEEP HEPLFSGKAA 
GEQALGPAQC ILEKKMFSLS GHVTKPVSLK KIRNVLPILL HGDATFAGQG VVYETMQMAE
VPDLMLIVFT TNPLHLRSTP YSSDLGKAFT CPIFHCNGND PLAVSTALET AVE