Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47061 |
Symbol | |
ID | 7202134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 306672 |
End bp | 308041 |
Gene Length | 1370 bp |
Protein Length | 386 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181349 |
Protein GI | 219122012 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGTTATCCTA CGACGTGATA GCCGATTATG AACAAGAGAG TTGACCACGA TCATGCTGGA GTAATGAGAA CCAATCAGAG CTACAGGAAA GGAGGACTAG AGTCCGTTAA GCTGAAGTGC TAAGGTCGGT GGCTGCATTG CAATATATTT GAAGGAGAAC CTTGCGCCAA TTTGGACCGT CTTTATTTCC TTAAACCCCC GAATCATCGA TGGAAAGATT CTGCTCTTCA AATGTGCCAT TAGCAGACGC TCTTCAGCTT CTTTCTAAGA ACGATCCGTG TGTACGAGAT TTACATCTGG ACTGCTCATG GTCGCTGGAG GATGATGCAA TGCTCAAGAT TGTTGAAGCG ATAAGCATCC ATTCCAAGCG CTATCCCAAG GACTCCGTAG TTCGAAGTAT TTCTACCGAG ATTCCCCGAT CCATCGCACG AGTAGTTCTG TTTTGCTCGG CAATTTGCAG GCTCCCACAT GTGGAAGCCG TCACGATTCG GCGTCGATCC GGAATCGCTT CGAAGTACCT AGGTCACTAT GTACTGTACC ATATTCTGGA ACCGTTTGAG AGAATGGTAC ATCGCCTCCA GCGACTCGAG GTCTATGATC CAATACAGTA CCTTTCATCA TCGACCGACT CAAGTACTGA GGTGGAAAAA ATCAACAGTT TCATTCTAGC CGCTGTTAAC CTTGAAATAT TTGCCCTCAC GAGAATCTAC GCTCCTGGTT CCAATAAGCT CTCGTCATTA ATTCAGGCTT TGATTGGACA GAAACGGCTT CGGATTTTAA ATCTGCAGCT TTCGTCTTTC ACATCGGAGC CCAAAGTGAC ACCAGAAGAT CTTCAAGTGC TTTGTCGATC AACGAGCTTG GAGCAGCTGA CTCTGATCAA TACAGGGATG ATCGACAGCC ATTTAAAAAT TCTGTCCGAA GAGTTACGCT GGAATTTGGT TCTTAAAAAG ATCGATATCC AACAAAATTG GCAGACTAGC GAAAATGGCT TTCTACATCT GCTAGAACTA ATGCAAAAGC AGTTCGTCAT CGTCGAGTTC AATTTGGAAG AGGGCATGGC TTTACCGGGT TTCGAGCAAG AAAATCAAGA TCGTCTTTAC GAGGAGTCTT GTGCAAGTTT CTTTTTCAAC AAGAGAACGG TCGCCGCCAA GATTGAATCT TTCGCTCGAA TGAATCGTGC AGGTCGACAG CGTATACAAA ACGATTCAAA CTATAGCCAT GACGACTGGA TCGATCTTAT TTCTCTTGTT GGCTATGATA TTGATGCCAT TTTCTACATG ATTCTGCAGA AACCGGAGGT GTGCAATCGC GACCACAGGT TGATCGCTAC GATTGGTGAC CGGTCAAGGA AAAGGAGGCG GATGGCTTAG
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Protein sequence | MERFCSSNVP LADALQLLSK NDPCVRDLHL DCSWSLEDDA MLKIVEAISI HSKRYPKDSV VRSISTEIPR SIARVVLFCS AICRLPHVEA VTIRRRSGIA SKYLGHYVLY HILEPFERMV HRLQRLEVYD PIQYLSSSTD SSTEVEKINS FILAAVNLEI FALTRIYAPG SNKLSSLIQA LIGQKRLRIL NLQLSSFTSE PKVTPEDLQV LCRSTSLEQL TLINTGMIDS HLKILSEELR WNLVLKKIDI QQNWQTSENG FLHLLELMQK QFVIVEFNLE EGMALPGFEQ ENQDRLYEES CASFFFNKRT VAAKIESFAR MNRAGRQRIQ NDSNYSHDDW IDLISLVGYD IDAIFYMILQ KPEVCNRDHR LIATIGDRSR KRRRMA
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