Gene PHATRDRAFT_46605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46605 
Symbol 
ID7201873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand+ 
Start bp875226 
End bp875927 
Gene Length702 bp 
Protein Length186 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180914 
Protein GI219120348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.289341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTAAAAATAC GTCTCGAAAA CATTTTCGGC GCACCGTGCA TCCTTTCGTT CACAGTTACT 
ACTTCGAGAT CAATCGAAAA GCCAGTCTTT GGAACAGATC GACACGACGT AAAGGCAGAG 
TTATTGTCTA GAAGAAAAAC TATGGGTTGG TATCATTCCA TGATTGCCGA AGGCCACAAA 
GCCTACGGCA ACGACACGGG TGCGGCTTGT TCTATTGAAG GCGTCTGTCC ATCCGCGTCA 
CTACCCGTCG ATAACCAAGC TACGGTGGTT TATCATATGG CTCAAAAATC CTTATGGGAT 
GCTGCGCGGA AGCAAGGCAA GGTGTACTAT CCACCAACGT TCGAAGAGTC GGGGCGAATA 
ACCCGAGCTT CGGTCAACCC TGACGCTCTG CTGAAAATCG CCAATATCGC CTATCAAAAG 
GAGAAAGGAG AATGGGTTTG CTTGGCCCTA GACCCCAAAG CACTTGCAAA GGAAGGCATC 
GTCACAAGAA TTGAAGAATG CGATGAGAAA GGTGGGATCG GTGAGAGTTG TCGTCAATTG 
CATGGAGGTA TTCCAACCAG TACCCTGGGC AATATTATGA AAAGAGTGTA CAATATGGAA 
CGCAGCAAGG AAGGCTCTTT TATTTCTATT CCTGGTTTGA TCGATGACAA AGAAGCATCT 
GATGTAGCGA GGCGGATGGA AATTCTAAGG CGGTTTGTGT AG
 
Protein sequence
MGWYHSMIAE GHKAYGNDTG AACSIEGVCP SASLPVDNQA TVVYHMAQKS LWDAARKQGK 
VYYPPTFEES GRITRASVNP DALLKIANIA YQKEKGEWVC LALDPKALAK EGIVTRIEEC 
DEKGGIGESC RQLHGGIPTS TLGNIMKRVY NMERSKEGSF ISIPGLIDDK EASDVARRME 
ILRRFV