| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46543 |
|---|
| Symbol | |
|---|
| ID | 7201687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011678 |
|---|
| Strand | - |
|---|
| Start bp | 658228 |
|---|
| End bp | 659928 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181046 |
|---|
| Protein GI | 219120623 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCAC AGAAGCAACC ACAGCGGAAG GACTCGGACG TTTCGGAAAA ATCGGACTCC
GGCGGGGGCG ATCCCTACGC TTCCGCAGAC TATCAAGAAG CGCTCGAAGA TGTGCACACC
CGCTTTATTC TGAATTTGCC GCCCTCGGAA CTCGAAACAG CCGACCGACT TTTCTTCCAA
CTGGAACAAG CATGGTGGTT CTACGAAGAT TGGATCTGTG ATCCTCATCC AGAGAAAGTT
TTGCCTCGGT TTTCCAGTTT CAAACCCTTT GCCCAGAAAA TGTTCGCCTA TTCGGAAATG
CTACCGGAGT CCCACAAATT CGGATCCATG TGGGCGGAGT TTTCGCAGTA CAAGCGCGGA
ATATCTAACT ACGGATGCAT TCTCTTGTCA GTGGATTACA CTAAAGTTAT TTTGTGTCAA
GGTTAGTGTT GGGCGGGATC TCATGCGTCC CCGGTACGAG TTTTCTCTCT TTTGGTCGCT
TTTCTGCCTG ATTTCTGACT GCCGTTTGCT TCTTTCAATT TAGTATGGAA TGGAAAGACG
TTCACCTTTC CAGCTGGAAA GATCAACCAG GGCGAAGATG GATTGACCGC CGCAGCCCGT
GAAACCTACG AAGAGACAGG GTTCGATCCC AACTGTGTGT TTGGACAAAC CGCTTCCTGG
AAAGCGACGG ATCCTGCGAA GATTACCTGG AAATCTTTGC AGGAACAGGA CGCTCTGATT
TTTCAAGAAG ACAATGGTAA ACGCCGAACC TGCTATGTCT GTCACGGTGT TCCGGAAGAC
TTTCCGTTCC TGCCCGTGGC ACGTAAGGAG GTCGCCAAGG TAGCCTGGTA CCGCGTGGAT
AAGATACCGA AATCTTCGTA TGCGGTATTT CCCTTTTTGT CCCAACTGAG ACGATGGATT
GCTCAACGCA CAAAGTCTTC GCGCGACAAG TCGACGGGCC GATCGAATGC TCGTAAAAAG
GGTACACCCA AGCGTTCCGG CAACAACTCC AGAGGTCGCG ATTCTCGCGG TAAAGTGCGG
GATGGCGACG GCCTGGTCAC CAGTGGACTA GCTGCGCCCG GAGAAGTATC CAGATGGTCG
GAAGACGATA TGTTCGCCGT TAACGAACGT CTCTTGGGGC GAAAAATCAC GTACGACGGG
AACCCTCATT TGTTTGAACA AGGATTTCAA GGCCAGGACC CGCACGCCTT TCACGTCGTC
GGTGGGTCTT TCCTCAATAC CAATGATTCG ACTCTGGCCC CGCCGCCGGC AACTTCAAAA
TTGCAACCTT TGTTTCGTGG CAGTAATAAT GATACGGGGA AAGATGAGTT GCTGCCCTTT
TTCTCGGATG ACGGTGCTAC ACCGTGGGGA GAAACAGTGG AAGACGCCAA AGGAGCACCG
CCACCCAGAG CTCTCAAGGA CGACGCCGAC GCCTTGCTGG CACTTTTACA GCAAACGAAG
GATCCACCCA AAAGCTTGTT GACAACCGGG AACGATGTCG ATGTGGCATT CCTAACGGAC
GCGGAAGTAA CCGCTCGCAG TAATGAAACC AAAACAACTG ATCGGCGAGT CACTATGCGG
GCGCAGTACG AAGCCGATAT GGAGTTTATT CGCGAATGGG TTGCGAATCT ACCCAAACCA
GGACCTTCCA AACATTTTGG AACGTTCAAG CTTGACGCCG ACGCAATCAT GGCCAACGCG
TTGGCCAGTG TATCAAAATA G
|
|---|
| Protein sequence | MASQKQPQRK DSDVSEKSDS GGGDPYASAD YQEALEDVHT RFILNLPPSE LETADRLFFQ
LEQAWWFYED WICDPHPEKV LPRFSSFKPF AQKMFAYSEM LPESHKFGSM WAEFSQYKRG
ISNYGCILLS VDYTKVILCQ VWNGKTFTFP AGKINQGEDG LTAAARETYE ETGFDPNCVF
GQTASWKATD PAKITWKSLQ EQDALIFQED NGKRRTCYVC HGVPEDFPFL PVARKEVAKV
AWYRVDKIPK SSYAVFPFLS QLRRWIAQRT KSSRDKSTGR SNARKKGTPK RSGNNSRGRD
SRGKVRDGDG LVTSGLAAPG EVSRWSEDDM FAVNERLLGR KITYDGNPHL FEQGFQGQDP
HAFHVVGGSF LNTNDSTLAP PPATSKLQPL FRGSNNDTGK DELLPFFSDD GATPWGETVE
DAKGAPPPRA LKDDADALLA LLQQTKDPPK SLLTTGNDVD VAFLTDAEVT ARSNETKTTD
RRVTMRAQYE ADMEFIREWV ANLPKPGPSK HFGTFKLDAD AIMANALASV SK
|
|---|
| |