Gene PHATRDRAFT_46539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46539 
Symbol 
ID7201834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp644656 
End bp645897 
Gene Length1242 bp 
Protein Length373 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181043 
Protein GI219120616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.032831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGCGAGTGTG GAAAGACCCA AAGCGAGCGT TTACTGGTAC CAGCTCTCGT TCTCATTGTC 
TCTGGCTCGT TCATGCGGTA AGCTTTGCAA TGGCAATGTT GTGGCAGATT CTGAGTTGGC
TCTTGGGATC GGTCGACAAG TCCATTGGGC TCGTCCGATG GATGCTTCCT CAACGTGCTC
GTCCCAAGTT CTTTGCGGAC GGATGGGGCA AATACGAGCT AGCTTTCGGG GCGCAGGACG
AAATGCTCAG CATGCTCAAA TCCAGCGACA AACGGAACCG CTTTCGAACC GAGCTGGAGA
ACGGGAGTAT TCAATGGAGT CAACCAGTCG TCAAGAGTTC TGTTTCGGTT ACCTCCGGAG
CATTTCCGAG TCCGGTGGCG CACTTACTTC CCGACAAAGC CAAGATCTGC CGATTTTATT
ACGTCCAACC AATTATCGAG GAGAAACGCA AAACAGTCAC CATCATCATG CTGCCAGGAA
CCGGCGAGGC GGGCAAAGGG GATCGGTTGA AGATGGCCAC TCAATTGGCC GACGAATGTG
GTTGGTCTTC GATTATTGTC ACCGCTCCCT ATTATGCCGC TCGCAAGCCG GACAATCAGA
CCGCATTCTT TGTACGAACC GTCGAGGACC TCCTGCTGCA AAGCGTCGCC ATCATGCAAG
AGGCCGCCAT CCTCGCGAGT TACTTTTTGC ACCGCTCGGA GCAACAGCGG GTTTGTATCA
CCGGATTTTC GTGGGGCGCA GCCATGGCCT CCGGTGCAGC GGCCGTTGCT CTCACAACTG
CCCACAAGGA CGCCGGTCGA CGCCTCGCCT GTGTCCCTTA CGTGGGGTGT TCGTCGCCGT
CCATTTTGGT GAGCGGCGTC CTGGAATCCA GTATCGACTG GACTGCTCTG CAACAAAAAC
CCAACGAACC GCACGGGGAA ACACACGCAC AAGCACTTGA GGTTTTGGGT CGGTTTCATC
TGTCGCCACT GAACGATGCT GTCCAAAGCC AGAACAAATC TATTGCGGCT CTGCATATTG
TCAATATGCA ACACGATTAT TTTATTCCCC AACGATTCAG TCGGGAGTTT ACTGCCGAAC
TTGGGCGTAT GACATCCGAT ACCAGCAATA GGGCCGCTCA AGTTTTACCC GGAGGCCACG
TTGTCGCGAT GCTTGTTCGG CCTTGGTACC AAAAGCGAGC CATTGTTGAC GCCGTGCATG
CGCTTTTCTA GTACTAAATT TAAGATCCAC TCATTTTCCT TA
 
Protein sequence
MAMLWQILSW LLGSVDKSIG LVRWMLPQRA RPKFFADGWG KYELAFGAQD EMLSMLKSSD 
KRNRFRTELE NGSIQWSQPV VKSSVSVTSG AFPSPVAHLL PDKAKICRFY YVQPIIEEKR
KTVTIIMLPG TGEAGKGDRL KMATQLADEC GWSSIIVTAP YYAARKPDNQ TAFFVRTVED
LLLQSVAIMQ EAAILASYFL HRSEQQRVCI TGFSWGAAMA SGAAAVALTT AHKDAGRRLA
CVPYVGCSSP SILVSGVLES SIDWTALQQK PNEPHGETHA QALEVLGRFH LSPLNDAVQS
QNKSIAALHI VNMQHDYFIP QRFSREFTAE LGRMTSDTSN RAAQVLPGGH VVAMLVRPWY
QKRAIVDAVH ALF