Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46539 |
Symbol | |
ID | 7201834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | - |
Start bp | 644656 |
End bp | 645897 |
Gene Length | 1242 bp |
Protein Length | 373 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181043 |
Protein GI | 219120616 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.032831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGCGAGTGTG GAAAGACCCA AAGCGAGCGT TTACTGGTAC CAGCTCTCGT TCTCATTGTC TCTGGCTCGT TCATGCGGTA AGCTTTGCAA TGGCAATGTT GTGGCAGATT CTGAGTTGGC TCTTGGGATC GGTCGACAAG TCCATTGGGC TCGTCCGATG GATGCTTCCT CAACGTGCTC GTCCCAAGTT CTTTGCGGAC GGATGGGGCA AATACGAGCT AGCTTTCGGG GCGCAGGACG AAATGCTCAG CATGCTCAAA TCCAGCGACA AACGGAACCG CTTTCGAACC GAGCTGGAGA ACGGGAGTAT TCAATGGAGT CAACCAGTCG TCAAGAGTTC TGTTTCGGTT ACCTCCGGAG CATTTCCGAG TCCGGTGGCG CACTTACTTC CCGACAAAGC CAAGATCTGC CGATTTTATT ACGTCCAACC AATTATCGAG GAGAAACGCA AAACAGTCAC CATCATCATG CTGCCAGGAA CCGGCGAGGC GGGCAAAGGG GATCGGTTGA AGATGGCCAC TCAATTGGCC GACGAATGTG GTTGGTCTTC GATTATTGTC ACCGCTCCCT ATTATGCCGC TCGCAAGCCG GACAATCAGA CCGCATTCTT TGTACGAACC GTCGAGGACC TCCTGCTGCA AAGCGTCGCC ATCATGCAAG AGGCCGCCAT CCTCGCGAGT TACTTTTTGC ACCGCTCGGA GCAACAGCGG GTTTGTATCA CCGGATTTTC GTGGGGCGCA GCCATGGCCT CCGGTGCAGC GGCCGTTGCT CTCACAACTG CCCACAAGGA CGCCGGTCGA CGCCTCGCCT GTGTCCCTTA CGTGGGGTGT TCGTCGCCGT CCATTTTGGT GAGCGGCGTC CTGGAATCCA GTATCGACTG GACTGCTCTG CAACAAAAAC CCAACGAACC GCACGGGGAA ACACACGCAC AAGCACTTGA GGTTTTGGGT CGGTTTCATC TGTCGCCACT GAACGATGCT GTCCAAAGCC AGAACAAATC TATTGCGGCT CTGCATATTG TCAATATGCA ACACGATTAT TTTATTCCCC AACGATTCAG TCGGGAGTTT ACTGCCGAAC TTGGGCGTAT GACATCCGAT ACCAGCAATA GGGCCGCTCA AGTTTTACCC GGAGGCCACG TTGTCGCGAT GCTTGTTCGG CCTTGGTACC AAAAGCGAGC CATTGTTGAC GCCGTGCATG CGCTTTTCTA GTACTAAATT TAAGATCCAC TCATTTTCCT TA
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Protein sequence | MAMLWQILSW LLGSVDKSIG LVRWMLPQRA RPKFFADGWG KYELAFGAQD EMLSMLKSSD KRNRFRTELE NGSIQWSQPV VKSSVSVTSG AFPSPVAHLL PDKAKICRFY YVQPIIEEKR KTVTIIMLPG TGEAGKGDRL KMATQLADEC GWSSIIVTAP YYAARKPDNQ TAFFVRTVED LLLQSVAIMQ EAAILASYFL HRSEQQRVCI TGFSWGAAMA SGAAAVALTT AHKDAGRRLA CVPYVGCSSP SILVSGVLES SIDWTALQQK PNEPHGETHA QALEVLGRFH LSPLNDAVQS QNKSIAALHI VNMQHDYFIP QRFSREFTAE LGRMTSDTSN RAAQVLPGGH VVAMLVRPWY QKRAIVDAVH ALF
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