| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46514 |
|---|
| Symbol | |
|---|
| ID | 7201593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011678 |
|---|
| Strand | + |
|---|
| Start bp | 570527 |
|---|
| End bp | 572492 |
|---|
| Gene Length | 1966 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180858 |
|---|
| Protein GI | 219120230 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.710645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TACGACGAAG AAGCTGTCAA AATTTCTATT TCTCACTGCG CCGTTGGCAA AGTTTGCATT
CCTCGCTACG CTGTTGTTCT TATGCCAAAG GCAACTTCAA TTTCTGCGGA CGACTAACGG
TTTTTTCGAT TCCATGCCGG AACACTCATT ACCGTTGGAA GAACAGGTAG ATAGACAGCA
CTCGTGTACT ATCTTCTACA ATGTATACAC TGCAGAAGGC CATATGAGGC CAGCCCTCAC
AATTATCCGC AGGCAATTGC ACCAAATCGC ATCGTCTTTG GTGGAGGTGT TCGGCCAAGC
AGCGCGAAAG ATTCCTCTCA AAATCAATAC GATTGGATAT AATGTGAGCA CTCGAAGCAT
TATGAGTGCG TGTCGGAGCC ATACCGGACT GAAGTGTCAA CACTTAGACC ATTTTTTAGA
CGGAAATTTC GAGGATGTGA CGCTTAGTGC TATACATGAT CACTGCCAGA CGCAGGCTGA
TAATCATGTT GTCGTGTACG TGCACTCCAA AGGCACTTAC CACCCTTCCG AAAAGAATAA
CATTTGGCGT GACCTTATGA CCAATGCAGT CCTCAGTAAG GGCTGCTTGG AATTAGGTCG
CGGCTACCAG AATAATACGG AGAGCAGCTG CAATGTTTGT GGGTTTTTGT TTCAACCAAT
CTGGACGTTC ATGTTTCCGG GAAATATGTG GAGCGCACAA TGCGGATATG TCCGAAAGCT
AAAGCATCCT AGGCTTTTCA AAGCAAACAT GGACTTTATT GCAGATGATG CCTTAGACTT
GATGCAGCAC GGCCACTTTA CCATGAATTT GGCGCCACCT TTGCCCGTGG ATATTGGTCG
CCTCGGTCAA GGAAGGCATG CGGATGAGCA TTGGATCGGA TCCCATCCTT CTATCTTTCC
TTGTGATGTT GCACCAAACT CGAATTTATG GAAATGGGTG TCGCCGCCTC CCGAGGGTTT
CGTGCCTGGA CACGCTCCTC CGATAAGATG GTCTCCTGCG CCTAGGTACA GTATTTTTGG
AGAGTGGGGT TTCTATCGAG ACGAAAACGA ATCGCAAACC AAGCGAATGC TCCGCACGCC
GGAGTGGCGC TCAAGGGAAT ATTTCCTACT TCCTGGCTTT CTCTGGAAAT GGCTTCGCTG
GTACAACGAA GTGCCTCCGC CAAATTCGTT TGTCTGGAAG TGGTTTCCTG ATGGAGAAAT
GTGGCTTGAG CGCTCTCGAC AATTAAATGC TGAACAATTG CTTACCTATA TTTCAGGAGC
TCTCGACAGT CCTCTTCCGA CAGTCGCCAC TTTCGAGTCT TCGGTGACAA ATATTCGTCC
GCCTCTTGTG TACTTCATGC ACATCGATTT GCCGGCAAAA GAAGATAATC AAAACCGGAT
TGTGCAACAG CAACTTGCCT ATTTGAGTTC ATCTTTCAAA ACGAATACAA CAATTTTCGT
GTACACCAGC GGAGGTCTTT CATCATTGGA TACAACAGTG TTAGAAAGCT GGTGTAGGTT
ACAACATCAG CTGAACTGTA AACATGTTCA GCATTATCCT GCTGCTCTGG ATATTATCAC
GCAAACGCGT GTGCAAGACT TCTGTCGATT GCACGAAACC TTTCAAGTCG CATTTCTCAG
TGGGCCTTCT ATACCCATAC AGTCTCTCGA TGCACTTCAT GCGTGCTGGG AAGATCATAG
AGCAAGTGGA GAAGAGGAAA GCTCATGTGA TGTGTGTCTA TCCAATTCCG GGCTAGAGAA
TCACGACAGG ATGCTGTGGA TCTCCCAGTG CTCCTTTGTG AAGGACTTGA TTGCTTCGAC
TGAACATGCG GCAGCTATGT CTAGCAGAAA GATGAGAAAA GAAATAAAAA TTGGAAAATA
CTGGGTTGTA AGCAAGAGAC CGAACACAAC TGGAGCTGCC CGTGTATGTT CATCTGGCTA
GGTGATAAAA AAGTTCTTTA TAAATGTAAT GCTTCCGTTT CATTCT
|
|---|
| Protein sequence | MPEHSLPLEE QVDRQHSCTI FYNVYTAEGH MRPALTIIRR QLHQIASSLV EVFGQAARKI
PLKINTIGYN VSTRSIMSAC RSHTGLKCQH LDHFLDGNFE DVTLSAIHDH CQTQADNHVV
VYVHSKGTYH PSEKNNIWRD LMTNAVLSKG CLELGRGYQN NTESSCNVCG FLFQPIWTFM
FPGNMWSAQC GYVRKLKHPR LFKANMDFIA DDALDLMQHG HFTMNLAPPL PVDIGRLGQG
RHADEHWIGS HPSIFPCDVA PNSNLWKWVS PPPEGFVPGH APPIRWSPAP RYSIFGEWGF
YRDENESQTK RMLRTPEWRS REYFLLPGFL WKWLRWYNEV PPPNSFVWKW FPDGEMWLER
SRQLNAEQLL TYISGALDSP LPTVATFESS VTNIRPPLVY FMHIDLPAKE DNQNRIVQQQ
LAYLSSSFKT NTTIFVYTSG GLSSLDTTVL ESWCRLQHQL NCKHVQHYPA ALDIITQTRV
QDFCRLHETF QVAFLSGPSI PIQSLDALHA CWEDHRASGE EESSCDVCLS NSGLENHDRM
LWISQCSFVK DLIASTEHAA AMSSRKMRKE IKIGKYWVVS KRPNTTGAAR VCSSG
|
|---|
| |