Gene PHATRDRAFT_46499 details

Gene Information

• Locus tag: PHATRDRAFT_46499
• ID: 7201583
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: +
• Start bp: 527036
• End bp: 529276
• Gene Length: 2241 bp
• Protein Length: 669 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002180848
• Protein GI: 219120209

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCAGCC TTCATAGACT CAATCGATCT GATCTTGACA AGGCAATAAG ATTCTCAAAT 
ATACAAACCT TTCAGCTGCG GGGTATCGGA ACAATACTAT TGCAAATTCA AGAAATTGCG 
ATTTTTGCCG CCGAGGAGTT GCAACCTACA TTTGTCCCTT GGGAAGCTCC TGGAATACAG 
CTTTCCACAG TGACTGTGAG TAGCAGAATG ATTCTGACGT AGTACCGATC GAGCGCATCG 
GCACTCGAAT ATAGACCGTT CACCATAGAT ATAAAATACA GATTCATACC CGCTACCAGA 
ACGCGACCGG CAGCAGACGG ATGCCTCAAC CGCAACCGCA ACCCGTAGAG GAAAACACAG 
GGGATGCCTT TGGAGAAAGT TTGCTTCTTT GGCGCGCTGC TCATCGTTAG TGGTGCTGTC 
ATACATCTCG ATTCTCTAGT TCTGCTTCCA TTTCATTGGA ACTTTGTCGG TAGCTGTCCC 
TCCGTATAGT TTCGTACCAG GGGCGATCTG CGCTCGTTCT CCCATTTTCA GTTGTGAGCG 
CACTTTCGTC TGTTATCATG TCAGATTACG TCACAGAACT GAGCCCCCAC GATGTGTTGT 
TCGGCCGCGG TTCCGGGCCA AATGATCACG AAGGCAACGT GCGGTTTCGG CAGCTCGTTG 
CCTCGCGTAA GGACGAGTAC ATGGCAACGA ATCACCGCAT AACAAAAGCG AACATAGCAC 
GGGAAATTGT CGATCAGGTG CTACGACACA AAGGCCGATT TCTCAAAAAG ATCGAAGCCA 
CCGACCCGGT TAGTCTGCAT ATACCCGACG GTATTGATGC ATGGATCGAG GTTGACGAAG 
ACACCGTTAT GGAAAAGGCA AAACAAGCGC TTCGGCAGAA CCCGAACAAG CAAAAGGGAG 
ACACCGGACC TTCCGTGGGG TCGGAGAGTT CCAAAACCAC ACCGAACGCC AGCAACCCAC 
GGGCGACACT AGACATTGAA GCGGATATTC AAGCCTTTGC TAACATCGAA CCGATCCCAA 
TTCACTCCAT ATCCAGCGCA CCTTTCGCGA ATGAAGCTGT GACTTCCATG TCCACGCATT 
CGCCCGTGAC GTCGACCGAA GGCCATACAC TCAACTCACC CTGGCAATCG CAACAAGATC 
AACAGCCGCA ATTCCATCAC CGATATTTAA CCGATTCAAG TGAGTATCTC ATCTCAGATA 
GGGAAGAGTA CGCGATAGAC ACCAACACTG TCTCTGTGCA GCAAGATCAA TCACAGCCAA 
ACCAACGGCA GCAGTCCCCG CGAGGCGACG AAGATAGCAT GCTGAATATG CTACCCGGAA 
GCCACCGTGC TAGTTTGGCT ATTAGCGATG TCTTTAGTGG CGAGGAGCCC CGTCGTGGTA 
GCATGACCAT GAGCGATCTA ATTCGCATGC ACCGTGCGCG GGAAATTGGA CTCGAGCGCT 
CCAGCGACAA TCGCAATTCT ATGGATATGG ACGATATGCT GGATTCCTTT AGCAGGAGCA 
AAATCTCCAA TGAGAACAAC GATGTCCAGA ACAAAAGGTA CAATGCCAGT ACGGAAACAA 
TGGGTACAAT TGAACCGATT GGGACTGGTA GTGTGGCCGA CATGAGTTTT GCCACTATGA 
ACTCCTCGAC GTTTTCTTTC TACAAGGGCA ACGATTCCCT AGCGGTGCCT GATGGGCAGG 
GGCCGCCAGA CCGGCCAATT ATCGACAATC GCTTCATGGC AACCGCGTCC ACGCTTCCAG 
AACTCGGAGT ACCCACTTCG CGCACAGTTA ATCGGTTCGC ATCGGATAAT TCTCTGAGCA 
TTGCGGAGCT CCGGGGGCGA CGCAAGTCCG GTTCGACACC ATCCAAGTCC AGTTCGGAAG 
AAGGGTCGGG CTTTCATACA AGTGGAAATT CCACCCTTTC TTCGCATCCC ACAGTAGCAA 
GCGGCAACTC TGTGTCCCAA ACCATTGTTT TGGAAGATCA GTCTCTCGAA CTGGATTTGA 
ATTCCATGGG ACTTTCGTCT GTGGAGATGC TAAAGGGAAT GATCTTAAGT AGCAGTAACG 
ATATGAGCTT GAACGACATT TCCGAAGAAA GTTTGCAGCA ACTCCTATAT CAGCACCAGC 
AACAAACAGG CACAGGTCTA CGCGCTAGTC AACAAGATGC ACAGCAGCGC CAGAACGACG 
ACAAAAACAA CGATTCCTAA CACTTTTACC ACGGGCCTAC TGTTAAATAA TTTTTCTTTC 
ACATGGGATA CACAACCTAA A 

 

Protein sequence

MVSLHRLNRS DLDKAIRFSN IQTFQLRGIG TILLQIQEIA IFAAEELQPT FVPWEAPGIQ 
LSTVTIHTRY QNATGSRRMP QPQPQPVEEN TGDAFGESLL LWRAAHLSYQ GRSALVLPFS 
VVSALSSVIM SDYVTELSPH DVLFGRGSGP NDHEGNVRFR QLVASRKDEY MATNHRITKA 
NIAREIVDQV LRHKGRFLKK IEATDPVSLH IPDGIDAWIE VDEDTVMEKA KQALRQNPNK 
QKGDTGPSVG SESSKTTPNA SNPRATLDIE ADIQAFANIE PIPIHSISSA PFANEAVTSM 
STHSPVTSTE GHTLNSPWQS QQDQQPQFHH RYLTDSSEYL ISDREEYAID TNTVSVQQDQ 
SQPNQRQQSP RGDEDSMLNM LPGSHRASLA ISDVFSGEEP RRGSMTMSDL IRMHRAREIG 
LERSSDNRNS MDMDDMLDSF SRSKISNENN DVQNKRYNAS TETMGTIEPI GTGSVADMSF 
ATMNSSTFSF YKGNDSLAVP DGQGPPDRPI IDNRFMATAS TLPELGVPTS RTVNRFASDN 
SLSIAELRGR RKSGSTPSKS SSEEGSGFHT SGNSTLSSHP TVASGNSVSQ TIVLEDQSLE 
LDLNSMGLSS VEMLKGMILS SSNDMSLNDI SEESLQQLLY QHQQQTGTGL RASQQDAQQR 
QNDDKNNDS