Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46488 |
Symbol | |
ID | 7201823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | + |
Start bp | 487194 |
End bp | 488794 |
Gene Length | 1601 bp |
Protein Length | 231 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180841 |
Protein GI | 219120194 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGACT CAGATGAAGA TTCCACTGCT TTATCAGATG ACAACACCGC CAAAGCTGGC GGAGAACCTA GAAAAGTTGT AACGGAAGAC ACTTGCCCAG AAACCGCGTC GAAATCGGCC CGGTTGGAGG CTCCAGAGGC GACTGGACGC ACACAGGTTC GGTTACCGAA CACGCTATTG GTCCTTTCGC CGATGGAAAG ACATGCTTCC ACGCAGCTCA AGGGAACGGA CCTACTCGAA ACCTTTCTTT TACGTATTAT TCTGGCCAGT CTGAGGTGCA AGAAGGACTA CCTTTCGAAG AAATCTAAGA GAAAGGGTCG AAGCGTACCC GCACCCCAAG TCCAACGGAC AGTTTGCCGA TCTTTTGGCG CTTGTCCAAA GCTTTACTGT AAAATTATGT CAAGCTACCT CATGGACCAT TCTGTTCACA CCAGTGGGGC TGAAGGGCAA GGGAGAGCCG GAAATCCTTT GCCGAGAGAG ACTCGGATCC CACGTACAAA GGCCGTCACA ATTGCTCTCC GCGAATTCGT ACAAAAAGAA CGGATGAATA GGAAACGAGT CACTGCGAGT CAGCTGTTGG ATTTTTTTAT GAAAGAGAAC ATTGTTCATA TTTTAACGGA TCCGCGCACT GGACTTTTAT CAAAAACGGA GTTTGATTCA GCCCATCGTA ACGTGCGTCG GTATCTGGAA GGCTAAGGGT ACAGGCGGGG CCGTCGAAAG GACATTGCGC CAGATCCAGT GCTTATCTTC GAGCGCCATG AGTATGTGCA AGCTCTTTTT GCCAATGAAG CATTGCCAAA GGAACAGATA CCTGCGCAAT GTGTACTTGG ACAAAAGTTA CATCCATGAA CAATACAACA AGTATGAGAC TTAGTACCTT GGATCCAAGT AAAGATTTGG ACATCAGATT TTGTAAGTAC AAGCACAAAG GTTGGCAATA CTGTCTTGCT GCCGCTATTC AGGGACCAGA TCCTTTGGTG GACATCCTTG AACTTGCATC TGGAAAGGCT GGACTGGTAA AAGGAATTCT ATGGGCATTC TGCCCACAGA AAAAGGATAG TCACAAAGGT GACTCCCTTC AATGGAGAAA ATTTTGTTGA TTGGTGAAAA CATCAACTTC TACCCAATCT TAACCAGCCT TCTCAGCCTT CCCTTATCCA CATGGATGAT GCAGCATATC ACAAGGTACA TGGGGATCAA GTGCCAAAGC GGGGGAAGAT GCAAAAGCAC GAGTGTATTG AATATCTAGT CAAAAGGTAT CGAGACCAAG GCCGGATGCT CCGCTGCGAT GGTCAAAGCT CAGACAAAAG CCTGGATTGT TGCAAATGAG AAATTTGAAT GCAGTAGATT GGCAGAGAAG CAAGGACACA CAGTCTTGTT CACCCCACCA TACCACAATG ATCTACAGCC AATGGAGTAT GTTTGGGCTC TGATTAAGGG CAATATTGAT AGGCAGTTTA GTGTGAATTC AACTCTAGAG ATTGTATACC GGCAACTGCT GAAAGAGTTT GACAATTTGC TGGAGTCTGG ACATGACTTT ATCCATGGTA TGATTGAGAA GTGTATGAAG CTTGCATAAA AGTTTCTGGA TGACATTCCT G
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Protein sequence | MADSDEDSTA LSDDNTAKAG GEPRKVVTED TCPETASKSA RLEAPEATGR TQVRLPNTLL VLSPMERHAS TQLKGTDLLE TFLLRIILAS LRCKKDYLSK KSKRKGRSVP APQVQRTVCR SFGACPKLYC KIMSSYLMDH SVHTSGAEGQ GRAGNPLPRE TRIPRTKAVT IALREFVQKE RMNRKRVTAS QLLDFFMKEN IVHILTDPRT GLLSKTEFDS AHRNVRRYLE G
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