| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46447 |
|---|
| Symbol | |
|---|
| ID | 7201548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011678 |
|---|
| Strand | + |
|---|
| Start bp | 368238 |
|---|
| End bp | 369517 |
|---|
| Gene Length | 1280 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180813 |
|---|
| Protein GI | 219120136 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTTACCTTA CCTCCCACCA ACGGCAAGAG ACCGAATTGG AACATTGTTC GAAGCAGCTG
TAAAATTGTT TCATGCTGCT GACCAGTCAG AGAAATTTGA AACGTGCACT TGGCGCTATG
TACAATGTAG TGTTCGGATC ATCATTTCAT CCCGACCTGA CTAGGCAGCA GTCTTGAACT
CCATGAAATG AGAAAATCGA ACCGAAGTGG CCTTTTCTCT ATCAGCAACA ACGCGAAGGA
GGCTTTTAGT TGCTCGACGT AAATATTCTC GAACACATGC ATTACATGAT AGGTTGCGCG
ATCGCCTGCG AGAGAGGCTA CAATTGCATA GATGCGAAGA CAGGCCTATC AAGAACGGAA
TCTGAACAAG GACAATCAAG GTCACAAAAA ACGGAAGCAC AGACGATTAC TTTGAGATTA
TTACGAAAGC CATGAAACTA TCCTATGTTA CTTCACTACC AGCAATGACT TCGGCTTGCA
ACACCGGGCA ATACCGGATG GGACGCTCTT GCATGAATGG TAGTAACTCC ATTCGGAATT
GTGCTAGACG TCACCATTGC GGAGGCAATC GCCACGGCTG GGGTCATGCG TGCCGGAATG
GGGTGGTTCA TGAGGATGCA GCGGAAAAGT TGCTTGTGTC TAGCTGGGGT CCTCGTAGTC
TTGGTCACCA CAACTGTGCG CCGGGAATCG GACCCCATGA AGGACAGCAA GATACGAAAA
TGTGCTTTGG GCAGGGACAC CCAGGCAGTC AAAAAGGCCA AGGCTGGAAC TTCTGGCAAT
CTAGTTCCAC TACGCAGGGT CAAGTGCTTA GCCCGGCTCA AGGAAGAGGA CGCCGGCAGG
GTTTAGGCAT GGGTTGGCGC TCGACGGAGG AAAGTCAGCC ATGTGAATTG AGAAACATGG
TTGGACAGAG TTCCCATGCG CCGTTGGTTG ATATCGTTAC AGATGATGAC CATGTATTTC
AAATAGCTTT TGACTTGCCC TATGCAAAAC CATCGGACAT TGAAATCTCT GTCAATAGAC
AGGATAGAGT CTTGACTGTT TCGGGTATGC GTCAAATTGG ATTTGGAAGT GAAACTTCTA
TGATCCCTTT CTTGGAGCGC ATTTCCATAG ATTCATGGAT CAGTATGGAT CGATTCTCGG
CGAAGCTAAG CAACGGATTA TTGCTGGTTA CAGCCCCAAA AGAATTTGAT GCGAAAGACA
GCTTTGTCCA GAAGATTTCC ATCCAGGATG TCGACACTAA AGAGCAAGCT ACGGATTAGA
AAATGTAAGT TATAAAAACC
|
|---|
| Protein sequence | MKLSYVTSLP AMTSACNTGQ YRMGRSCMNG SNSIRNCARR HHCGGNRHGW GHACRNGVVH
EDAAEKLLVS SWGPRSLGHH NCAPGIGPHE GQQDTKMCFG QGHPGSQKGQ GWNFWQSSST
TQGQVLSPAQ GRGRRQGLGM GWRSTEESQP CELRNMVGQS SHAPLVDIVT DDDHVFQIAF
DLPYAKPSDI EISVNRQDRV LTVSGMRQIG FGSETSMIPF LERISIDSWI SMDRFSAKLS
NGLLLVTAPK EFDAKDSFVQ KISIQDVDTK EQATD
|
|---|
| |