Gene PHATRDRAFT_46445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46445 
Symbol 
ID7201546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp358172 
End bp358992 
Gene Length821 bp 
Protein Length236 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180993 
Protein GI219120512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTTT CCTGCGCGGA TAGATCGACG ACGATGTTTC CGGCGTTCAT TCCACACGGA 
CGCCAACCGA CAATGGAGGC AACAACCATA ACGCCCAATG ATGTGCTTTG TGGGAAAGAC
AAGACCTACG GACGGCACCC TGGCAACCAA GTTTTTCGTC AATTGATTGA AGCATCAGCT
CATCGTTATG GAACCGCTCA ATTGAAGCAA GAAAAGATGG ATATGACGCA AGAGATTGTG
CAAAATATGA AGGAGATTTA CCATGCTCGG TTTCTCACCT TAAAAGGGGG CGAATGGCAT
GAAATCTCCT TCGGTGCTGC ACGAGACAAG GTCAGCCATG CACTCCGTTT TGCGGCTAAG
CAGTCTTCTC GCGAGAGCAG TCCAGTGAGT GGCGATTCGA ATGTCATTGT AATTCCCTCT
TCCTCTGTAT TCCCTCAGCC CGATCGAGAT ACAGTGACAA CACAGTTCCC TGCATTGTCT
AACATAGTTC AGCGGCAGCA AGAGCTTCTA CGTCACCAGC AAGGGACAGA CGATCTTGCC
GACTACCATG ATATCACACC GATTGCTTTA AGTCGGAACT ACAGTAAGAC TGCTTCGGAA
GAACAAAGCC ACGCATTTGA CACTCTACGA AGTTCCGACA TGACTGATTT GCTCGCATCT
TCAATGGACG AAGACGAATG GGAGATTGTG AGATCTATGG CCCAAAGTTA GCAAATGCAT
TCAACTCAAG GCAGCGTCTC ACGATCCCAG CCGTCCCCAC TTGTTCACTA TTGCAGAAAG
CTCATTCAAT TTCAGACTGA AAAGGCTTGT AAAATATTTT T
 
Protein sequence
MTFSCADRST TMFPAFIPHG RQPTMEATTI TPNDVLCGKD KTYGRHPGNQ VFRQLIEASA 
HRYGTAQLKQ EKMDMTQEIV QNMKEIYHAR FLTLKGGEWH EISFGAARDK VSHALRFAAK
QSSRESSPVS GDSNVIVIPS SSVFPQPDRD TVTTQFPALS NIVQRQQELL RHQQGTDDLA
DYHDITPIAL SRNYSKTASE EQSHAFDTLR SSDMTDLLAS SMDEDEWEIV RSMAQS